Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12570
- Subject:
- XM_006525952.3
- Aligned Length:
- 3171
- Identities:
- 1814
- Gaps:
- 1113
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTTCCCAGCAGTTTCCTCGGTTAGGAACCCCTTCCCCTGGGCTTAGCCAGCCACCTTCACAGATTGCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGTGGTTCCGCAGGACTGATAAACCAAGTTGCCACAGTTAATGATGAGGCTGGCCGAGATGCTGATGTTGGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGGGAGCACGTGGGCCCTAGCAGCTCCCTGCCGCCCCGGGAAGAGAAGCAGGAGCCAGTTGTGGTAAGGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TATCCACAGGTACAGATGCTGCCTGCACACCATGCTGTCGCCTCAGCCACCCCTGTCGCAGTGACAGCCCCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCACACCTGACACCAGCAGTACCACTCTCTTTTTCGGAAGGACTTATGAAGCCGCCCCCGAAGCCTACCATGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTAGCCGTCCCATTGCGCCTGCTCCCCCTTCTACCATGTCACTTCCCCCGAAAGTTCCCGGGCAGGTTACTGTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCATGGAGAGCAGCATCCCTCAAGCTTCAGCCATTCCCGTGGCAACAATCAGTGGACAACAGGGGCATCCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAACCTGCATCACATTATGACCACAAATGTGCAGATGTCCATAATCCGCAGCAACGCTCCCGGGCCCCCACTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACATTGGAGCTTCCCACTTACCTCGAGGTGCAGCTGCTGCCGCTGTGATGTCCAGCTCTAAAGTAACTACAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTGAGGCCAACTTCACAGCTGCCAAATGCTGCTACGGCGCAGCCAGCAGTACAGCACCTCATTCACCAGCCAAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAGTCTCGGCCACCTGTGACCACCTCCAGTACAATCCCTCCTGCTGTAGTAGCAACAGTCTCAGCCACCAGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCAGTCTCCTGTCATCACTACGACAGCGGCCCACGCGGCTGACTCGACGCTCAGTCGGCCCACTTTATCTATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGCATCCACCATCTGCAGCCATTAGTATCCAGCGTCCTGCACAGTCTCGAGATGTGACAACAAGAATCACACT 962
Query 1 ----------------------------------------------ATGGCTCAGAAAACAATCTTCAGTACTG 28
||||||||||||||.|||||.|||||||
Sbjct 963 ACCTTCTCATCCTGCGTTAGGGACTCCGAAACAGCAGCTCCATACAATGGCTCAGAAAACCATCTTTAGTACTG 1036
Query 29 GCACGCCAGTGGCTGCAGCCACAGTAGCACCTATTTTGGCAACCAACACCATTCCTTCAGCGACCACAGCTGGA 102
||||.||||||||||||||.|||||||||||||||.|||||||||||||..||||||||.|.||||||||||||
Sbjct 1037 GCACACCAGTGGCTGCAGCTACAGTAGCACCTATTCTGGCAACCAACACGCTTCCTTCAACAACCACAGCTGGA 1110
Query 103 TCTGTGTCACACACGCAAGCTCCCACAAGTACCATTGTTACCATGACAGTACCCTCCCATTCCTCCCATGCTAC 176
||||||||.|||||.|||||||||||||||||.|||||||||||||||.|.|||||||||||.|||||||||||
Sbjct 1111 TCTGTGTCGCACACACAAGCTCCCACAAGTACAATTGTTACCATGACAATGCCCTCCCATTCATCCCATGCTAC 1184
Query 177 TGCTGTGACCACCTCAAACATCCCAGTCGCCAAGGTGGTGCCCCAGCAGATCACGCACACTTCTCCTCGGATCC 250
||||||||||||.|||||.||||||||.||.|||||||||||||||||||||||.||||||||.||||||||||
Sbjct 1185 TGCTGTGACCACTTCAAATATCCCAGTTGCTAAGGTGGTGCCCCAGCAGATCACACACACTTCCCCTCGGATCC 1258
Query 251 AGCCAGACTACCCTGCCGAGAGGAGTAGCCTGATTCCCATCTCCGGACATCGGGCCTCTCCCAATCCTGTGGCC 324
||||.||.||||||.|.|||||||||||||||||||||||.|||||.||||||||||||||.|||||.||||||
Sbjct 1259 AGCCTGATTACCCTCCAGAGAGGAGTAGCCTGATTCCCATTTCCGGCCATCGGGCCTCTCCAAATCCAGTGGCC 1332
Query 325 ATGGAAACCCGAAGTGACAACAGACCGTCTGTTCCCGTTCAGTTCCAATATTTTTTGCCAACTTACCCCCCTTC 398
|||||||||||||.||||||||||||.||.|||||.|||||||||||.||.||.||||||||||||||.||.||
Sbjct 1333 ATGGAAACCCGAAATGACAACAGACCTTCCGTTCCTGTTCAGTTCCAGTACTTCTTGCCAACTTACCCACCCTC 1406
Query 399 TGCATACCCACTGGCGGCACATACCTACACCCCAATCACCAGTTCCGTGTCCACTATCCGACAGTATCCAGTTT 472
|||.|||||.|||||.|||||.|||||||||||.||||||||.||.||||||||||||||.|||||.|||||||
Sbjct 1407 TGCCTACCCGCTGGCTGCACACACCTACACCCCCATCACCAGCTCTGTGTCCACTATCCGGCAGTACCCAGTTT 1480
Query 473 CAGCTCAGGCTCCAAACTCTGCCATCACAGCTCAGACTGGTGTTGGGGTAGCGTCTACCGTCCACCTAAACCCC 546
|.|||||.||.||||||||..|||||||||||||.|||||||||||.|||||.|||||.||||||||.||||||
Sbjct 1481 CTGCTCAAGCCCCAAACTCCACCATCACAGCTCAAACTGGTGTTGGTGTAGCATCTACAGTCCACCTGAACCCC 1554
Query 547 ATGCAGTTGATGACAGTGGATGCATCGCATGCTCGACATATTCAAGGGATCCAGCCAGCACCCATCAGTACCCA 620
||||||.||||||||||||||||.||.|||||.||||||||.||.||||||||||||||||||||||||||.||
Sbjct 1555 ATGCAGCTGATGACAGTGGATGCCTCACATGCCCGACATATCCAGGGGATCCAGCCAGCACCCATCAGTACACA 1628
Query 621 GGGTATCCAGCCGGCCCCCATTGGGACCCCAGGGATACAGCCTGCACCACTTGGCACACAGGGAATTCACTCAG 694
|||.||||||||.||||||||||||||..|||||||.|||||.||||||.|||||||.|..|||||.||.||||
Sbjct 1629 GGGAATCCAGCCAGCCCCCATTGGGACATCAGGGATCCAGCCAGCACCAATTGGCACCCCAGGAATCCATTCAG 1702
Query 695 CAACCCCAATCAACACACAAGGGCTTCAGCCTGCACCTATGGGTACTCAGCAGCCTCAGCCTGAAGGAAAGACT 768
||.|||||||||||||.||.|||||||||||.|||.|.||||.||.|||||||||.||||||||.||.||.||.
Sbjct 1703 CAGCCCCAATCAACACTCAGGGGCTTCAGCCAGCAGCAATGGCTAATCAGCAGCCACAGCCTGAGGGGAAAACC 1776
Query 769 TCAGCAGTGGTGTTGGCAGATGGAGCCACAATTGTGGCCAACCCTATTAGCAATCCATTCAGTGCTGCTCCAGC 842
||||||||||||||||||||||||||.||||||||.|||||||||||||||||.||||||||||||||||||||
Sbjct 1777 TCAGCAGTGGTGTTGGCAGATGGAGCTACAATTGTAGCCAACCCTATTAGCAACCCATTCAGTGCTGCTCCAGC 1850
Query 843 AGCAACAACCGTGGTGCAGACCCACAGCCAGAGTGCTAGCACCAACGCTCCCGCCCAGGGCTCATCGCCACGGC 916
.|||||.||.|||||.|||||.|||||.||||||||||||||||||.|.||.|||||||||||.||.||.||||
Sbjct 1851 GGCAACCACAGTGGTCCAGACACACAGTCAGAGTGCTAGCACCAACACACCAGCCCAGGGCTCTTCTCCCCGGC 1924
Query 917 CAAGCATACTCCGGAAGAAACCTGCCACAGAT------------------------------------------ 948
|.||||||||.|||||||||||||||||||||
Sbjct 1925 CCAGCATACTGCGGAAGAAACCTGCCACAGATGGGATGGCAGTCCGGAAAACTCTCCTCCCTCCTCAGCCTCCT 1998
Query 949 ---------------------------------------------------------------GGTGCCAAACC 959
|||||||||||
Sbjct 1999 GACGTGGCTACTCCTCGAGTAGAAAGCTCTATGCGGAGTGCTTCTGGGTCACCTAGACCTGCAGGTGCCAAACC 2072
Query 960 CAAGTCTGAAATCCACGTGTCTATGGCCACTCCGGTCACTGTGTCCATGGAGACTGTATCCAATCAAAATAATG 1033
.||.||.|||.|.||.||||||||.||||||||.||.||.||||||.|||||||..||||||||||||||...|
Sbjct 2073 TAAATCCGAAGTGCATGTGTCTATAGCCACTCCAGTTACAGTGTCCTTGGAGACCATATCCAATCAAAATGCCG 2146
Query 1034 ATCAGCCTACCATTGCCGTCCCTCCAACTGCCCAGCAGCCCCCACCGACCATTCCAACTATGATTGCAGCAGCC 1107
|.|||||||||.||||.||||||||.||||||||||||||.||||||||||||||.|..||||||||.||||||
Sbjct 2147 AACAGCCTACCGTTGCTGTCCCTCCGACTGCCCAGCAGCCTCCACCGACCATTCCCAGCATGATTGCGGCAGCC 2220
Query 1108 AGTCCCCCGTCACAACCAGCCGTTGCCCTTTCAACCATTCCTGGAGCGGTCCCCATCACTCCACCCATCACCAC 1181
|||||.||.||.|||||||||.||||||||||.||||||||.|||||.||.||..|||||||||||||||||||
Sbjct 2221 AGTCCTCCATCCCAACCAGCCATTGCCCTTTCCACCATTCCCGGAGCCGTGCCTGTCACTCCACCCATCACCAC 2294
Query 1182 CATTGCAGCTGCACCACCTCCATCAGTCACTGTGGGTGGCAGTCTTTCCTCCGTCTTGGGCCCTCCCGTTCCTG 1255
||||||.||..|||||.|.|..||||.|.|.|||||.||||.||.||||.|.|||.||||.|||||.|||||||
Sbjct 2295 CATTGCTGCCACACCAACGCTGTCAGCCCCAGTGGGCGGCACTCCTTCCACGGTCCTGGGGCCTCCTGTTCCTG 2368
Query 1256 AAATTAAAGTGAAAGAAGAAGTAGAACCAATGGATATCATGAGGCCAGTTTCTGCAGTTCCTCCACTGGCTACC 1329
|.||.||||||||.|||||||..||.|||.||||.||||..|||||.||.||..||||.|||||.|||||.|||
Sbjct 2369 AGATCAAAGTGAAGGAAGAAGCGGAGCCAGTGGACATCACCAGGCCTGTCTCCACAGTCCCTCCTCTGGCCACC 2442
Query 1330 AACACTGTGTCTCCATCTCTTGCATTGCTGGCAAACAACTTGTCCATGCCTACAAGTGACCTACCACCTGGTGC 1403
|||||.|||||||||||||||||.||||||||||.||||.|||||||||||.||||||||||.|||||||||||
Sbjct 2443 AACACGGTGTCTCCATCTCTTGCTTTGCTGGCAAGCAACCTGTCCATGCCTCCAAGTGACCTCCCACCTGGTGC 2516
Query 1404 CTCCCCAAGGAAAAAGCCTCGAAAGCAACAGCATGTGATCTCAACAGAAGAAGGTGACATGATGGAGACAAACA 1477
|||||||||||||||||||||||||||.|||||.||||||||.|||||.||.||.||.||||||||||||||||
Sbjct 2517 CTCCCCAAGGAAAAAGCCTCGAAAGCAGCAGCACGTGATCTCGACAGAGGAGGGGGATATGATGGAGACAAACA 2590
Query 1478 GCACTGATGATGAGAAGTCCACTGCCAAGAGTCTTCTGGTGAAGGCTGAGAAGCGCAAGTCTCCTCCCAAGGAG 1551
|||||||.||||||||||||.|||||||||||||.|||||.|||||||||||||||||||||||||||||.|||
Sbjct 2591 GCACTGACGATGAGAAGTCCGCTGCCAAGAGTCTCCTGGTAAAGGCTGAGAAGCGCAAGTCTCCTCCCAAAGAG 2664
Query 1552 TATATTGATGAGGAAGGTGTGAGATATGTCCCAGTGCGTCCAAGACCCCCCATTACTTTGCTTCGTCACTATCG 1625
||.||||||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||.|||||||||||
Sbjct 2665 TACATTGATGAGGAAGGTGTGAGGTATGTCCCAGTGCGACCCAGACCTCCCATTACTTTGCTACGTCACTATCG 2738
Query 1626 GAACCCCTGGAAAGCTGCTTACCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTA 1699
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GAACCCCTGGAAAGCTGCTTATCACCACTTTCAGAGGTACAGTGACGTCCGGGTCAAAGAGGAGAAGAAAGCTA 2812
Query 1700 TGCTGCAGGAAATAGCTAATCAGAAAGGAGTATCCTGTCGTGCTCAAGGCTGGAAAGTCCACCTCTGTGCTGCC 1773
||||.||||||||||||||||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||||||
Sbjct 2813 TGCTACAGGAAATAGCTAATCAGAAAGGAGTGTCCTGCCGTGCCCAGGGCTGGAAAGTTCACCTCTGTGCTGCC 2886
Query 1774 CAGTTACTACAGCTGACGAATCTAGAACATGATGTCTATGAAAGACTTACTAACCTGCAGGAAGGGATTATCCC 1847
|||||||||||||||||.|||||||||||.||.||.|||||||||||.||.|||||.|||||||||||||||||
Sbjct 2887 CAGTTACTACAGCTGACAAATCTAGAACACGACGTTTATGAAAGACTCACCAACCTACAGGAAGGGATTATCCC 2960
Query 1848 AAAGAAAAAAGCAGCAACAGATGATGATCTCCACCGAATAAACGAACTGATACAGGGAAATATGCAGAGGTGTA 1921
|||||||||.|||||.||.|||||.|||||.||.||||||||.||.||||||||||||||.||||||.||||||
Sbjct 2961 AAAGAAAAAGGCAGCGACTGATGACGATCTACATCGAATAAATGAGCTGATACAGGGAAACATGCAGCGGTGTA 3034
Query 1922 AACTTGTGATGGATCAAATCAGTGAAGCCAGAGACTCCATGCTTAAGGTTTTAGATCATAAAGACCGTGTCCTG 1995
||||.||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||.||.|||||.||.|||
Sbjct 3035 AACTAGTGATGGACCAAATCAGTGAGGCCAGAGACTCTATGCTTAAGGTTCTGGATCACAAGGACCGGGTGCTG 3108
Query 1996 AAGCTGCTTAACAAGAACGGGACTGTCAAAAAAGTGTCCAAATTGAAGCGAAAGGAAAAAGTC 2058
||||||||.||||||||||||||.|||||.||.|||||.||.||||||||.|||||.||.||.
Sbjct 3109 AAGCTGCTCAACAAGAACGGGACGGTCAAGAAGGTGTCAAAGTTGAAGCGGAAGGAGAAGGTG 3171
