Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12583
- Subject:
- XR_001752625.2
- Aligned Length:
- 3665
- Identities:
- 1857
- Gaps:
- 1808
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGCCACCGCCCAGCCGCTCGCAGGCGCCGCACGGAGTTGCGTCCCGGGGACTTGGGGCCGCAGGGAGCTGTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTACCCAGGAAGCTGCACCGTGTGGCCTGGAGCTGTCTATCTGTCCTTCCAGCCACCTGTCTGTCCAGCCACCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTCCACAGACTGAGGCTTGACACCGGAGCATCTGTACAGAGCAAGGAGAAGACAAGAACATGCTCTAAAGCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCACAGCAAGACCCAGGAAGCCGCGGGCAAACTCAGACTCGAAGCCCTCCCGCCTCCTGCCCACAATGGCCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGACAAGAATGGCGGGAGCGTGTCCTCTGTGTCCAGCAGCCGCCTGCAGAGCCGGAAGCCACCCAACCTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATCACCATCCCGCCACCCGAGAAAGAGACCCAGGCCCCTGGCGAGCAGGACAGCATGCTGCCTGAGGGTTTTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGAATAGGAGGCTAAAGAAAAGCCAGCCCAGGACCTGGGCTGCACACACCACCGCCTGCCCTCCCTCCTTCCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCAAGAGGAAGAACCCAGCCTACTTGAAGAGCGTCAGCCTCCAGGAGCCACGCAGCCGATGGCAGGAGAGTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAGAAGCGCCCTGGCTTCCGCCGCCAGGCCTCACTGTCCCAGAGCATCCGCAAGGGCGCAGCCCAGTGGTTTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGTCAGCGGCGACTGGGAGGGGCAGCGGCAGCAGTGGCAGCGCCGCAGCCTGCACCACTGCAGCATGCGCTAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCGCCTGAAGGCCTCGTGCCAGCGTGACCTGGAGCTCCCCAGCCAGGAGGCACCGTCCTTCCAGGGCACTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCCCCAAAGCCCTGCAAGATGCCCAAGATTGTGGATCCGCTGGCCCGGGGCCGGGCCTTCCGCCACCCGGAGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGATGGACAGGCCCCACGCCCCGCACCCACCGCTGACCCCCGGAGTCCTGTCCCTCACCTCCTTCACCAGTGTC 962
Query 1 ------------------------------------ATGTCTGTGGCCCACATGAGCTTGCAAGCTGCCGCTGC 38
||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGTTCTGGCTACTCCCACCTGCCACGCCGCAAGAGAATGTCTGTGGCCCACATGAGCTTGCAAGCTGCCGCTGC 1036
Query 39 CCTCCTCAAGGGGCGCTCGGTGCTGGATGCCACCGGACAGCGGTGCCGGGTGGTCAAGCGCAGCTTTGCCTTCC 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTCCTCAAGGGGCGCTCGGTGCTGGATGCCACCGGACAGCGGTGCCGGGTGGTCAAGCGCAGCTTTGCCTTCC 1110
Query 113 CGAGCTTCCTGGAGGAGGATGTGGTCGATGGGGCAGACACGTTTGACTCCTCCTTTTTTAGTAAGGAAGAAATG 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CGAGCTTCCTGGAGGAGGATGTGGTCGATGGGGCAGACACGTTTGACTCCTCCTTTTTTAGTAAGGAAGAAATG 1184
Query 187 AGCTCCATGCCTGATGATGTCTTTGAGTCCCCCCCACTCTCTGCCAGCTACTTCCGAGGGATCCCACACTCAGC 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTCCATGCCTGATGATGTCTTTGAGTCCCCCCCACTCTCTGCCAGCTACTTCCGAGGGATCCCACACTCAGC 1258
Query 261 CTCCCCTGTCTCCCCCGATGGGGTGCAAATCCCTCTGAAGGAGTATGGCCGAGCCCCAGTCCCCGGGCCCCGGC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTCCCCTGTCTCCCCCGATGGGGTGCAAATCCCTCTGAAGGAGTATGGCCGAGCCCCAGTCCCCGGGCCCCGGC 1332
Query 335 GCGGCAAGCGCATCGCCTCCAAGGTGAAGCACTTTGCCTTTGATCGGAAGAAGCGGCACTACGGCCTCGGCGTG 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCGGCAAGCGCATCGCCTCCAAGGTGAAGCACTTTGCCTTTGATCGGAAGAAGCGGCACTACGGCCTCGGCGTG 1406
Query 409 GTGGGCAACTGGCTGAACCGCAGCTACCGCCGCAGCATCAGCAGCACTGTGCAGCGGCAGCTGGAGAGCTTCGA 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GTGGGCAACTGGCTGAACCGCAGCTACCGCCGCAGCATCAGCAGCACTGTGCAGCGGCAGCTGGAGAGCTTCGA 1480
Query 483 CAGCCACCGGCCCTACTTCACCTACTGGCTGACCTTCGTCCATGTCATCATCACGCTGCTGGTGATTTGCACGT 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CAGCCACCGGCCCTACTTCACCTACTGGCTGACCTTCGTCCATGTCATCATCACGCTGCTGGTGATTTGCACGT 1554
Query 557 ATGGCATCGCACCCGTGGGCTTTGCCCAGCACGTCACCACCCAGCTGGTGCTGCGGAACAAAGGTGTGTACGAG 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATGGCATCGCACCCGTGGGCTTTGCCCAGCACGTCACCACCCAGCTGGTGCTGCGGAACAAAGGTGTGTACGAG 1628
Query 631 AGCGTGAAGTACATCCAGCAGGAGAACTTCTGGGTTGGCCCCAGCTC--------------------------- 677
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGCGTGAAGTACATCCAGCAGGAGAACTTCTGGGTTGGCCCCAGCTCGGTGAGGGCCCAGGCTGGGGGACATCA 1702
Query 678 -------------------------------------------GATTGACCTGATCCACCTGGGGGCCAAGTTC 708
|||||||||||||||||||||||||||||||
Sbjct 1703 TCTGAGCCAGGAGTCCCTGTGCCCTGTCACTCCCAGCTGGGCAGATTGACCTGATCCACCTGGGGGCCAAGTTC 1776
Query 709 TCACCCTGCATCCGGAAGGACGGGCAGATCGAGCAGCTGGTGCTGCGCGAGCGAGACCTGGAGCGGGACTCAGG 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCACCCTGCATCCGGAAGGACGGGCAGATCGAGCAGCTGGTGCTGCGCGAGCGAGACCTGGAGCGGGACTCAGG 1850
Query 783 CTGCTGTGTCCAGAATGACCACTCCGGATGCATCCAGACCCAGCGGAAGGACTGCTCGGAGACTTTGGCCACTT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CTGCTGTGTCCAGAATGACCACTCCGGATGCATCCAGACCCAGCGGAAGGACTGCTCGGAGACTTTGGCCACTT 1924
Query 857 TTGTCAAGTGGCAGGATGACACTGGGCCCCCCATGGACAAGTCTGATCTGGGCCAGAAGCGGACTTCGGGGGCT 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTGTCAAGTGGCAGGATGACACTGGGCCCCCCATGGACAAGTCTGATCTGGGCCAGAAGCGGACTTCGGGGGCT 1998
Query 931 GTCTGCCACCAGGACCCCAGGACCTGCGAGGAGCCAGCCTCCAGCGGTGCCCACATCTGGCCCGATGACATCAC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GTCTGCCACCAGGACCCCAGGACCTGCGAGGAGCCAGCCTCCAGCGGTGCCCACATCTGGCCCGATGACATCAC 2072
Query 1005 TAAGTGGCCGATCTGCACAGAGCAGGCCAGGAGCAACCACACAGGCTTCCTGCACATGGACTGCGAGATCAAGG 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TAAGTGGCCGATCTGCACAGAGCAGGCCAGGAGCAACCACACAGGCTTCCTGCACATGGACTGCGAGATCAAGG 2146
Query 1079 GCCGCCCCTGCTGCATCGGCACCAAGGGCAGCTGTGAGATCACCACCCGGGAATACTGTGAGTTCATGCACGGC 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCCGCCCCTGCTGCATCGGCACCAAGGGCAGCTGTGAGATCACCACCCGGGAATACTGTGAGTTCATGCACGGC 2220
Query 1153 TATTTCCATGAGGAAGCAACACTCTGCTCCCAGGTGCACTGCTTGGACAAGGTGTGTGGGCTGCTGCCCTTCCT 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TATTTCCATGAGGAAGCAACACTCTGCTCCCAGGTGCACTGCTTGGACAAGGTGTGTGGGCTGCTGCCCTTCCT 2294
Query 1227 CAACCCTGAGGTCCCAGATCAGTTCTACAGGCTCTGGCTGTCTCTCTTCCTACATGCTGGCGTGGTGCACTGCC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAACCCTGAGGTCCCAGATCAGTTCTACAGGCTCTGGCTGTCTCTCTTCCTACATGCTGGCGTGGTGCACTGCC 2368
Query 1301 TCGTGTCTGTGGTCTTTCAAATGACCATCCTGAGGGACCTGGAGAAGCTGGCCGGCTGGCACCGTATCGCCATC 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCGTGTCTGTGGTCTTTCAAATGACCATCCTGAGGGACCTGGAGAAGCTGGCCGGCTGGCACCGTATCGCCATC 2442
Query 1375 ATCTTCATCCTCAGTGGCATCACAGGCAACCTCGCCAGTGCCATCTTTCTCCCATACCGGGCAGAGGTGGGCCC 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ATCTTCATCCTCAGTGGCATCACAGGCAACCTCGCCAGTGCCATCTTTCTCCCATACCGGGCAGAGGTGGGCCC 2516
Query 1449 GGCCGGCTCACAGTTCGGCCTCCTCGCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCCGCTGCTGGAGAGGC 1522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGCCGGCTCACAGTTCGGCCTCCTCGCCTGCCTCTTCGTGGAGCTCTTCCAGAGCTGGCCGCTGCTGGAGAGGC 2590
Query 1523 CCTGGAAGGCCTTCCTCAACCTCTCGGCCATCGTGCTCTTCCTGTTCATCTGTGGCCTCCTGCCCTGGATCGAC 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CCTGGAAGGCCTTCCTCAACCTCTCGGCCATCGTGCTCTTCCTGTTCATCTGTGGCCTCCTGCCCTGGATCGAC 2664
Query 1597 AACATCGCCCACATCTTCGGCTTCCTCAGTGGCCTGCTGCTGGCCTTCGCCTTCCTGCCCTACATCACCTTCGG 1670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AACATCGCCCACATCTTCGGCTTCCTCAGTGGCCTGCTGCTGGCCTTCGCCTTCCTGCCCTACATCACCTTCGG 2738
Query 1671 CACCAGCGACAAGTACCGCAAGCGGGCACTCATCCTGGTGTCACTGCTGGCCTTTGCCGGCCTCTTCGCCGCCC 1744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CACCAGCGACAAGTACCGCAAGCGGGCACTCATCCTGGTGTCACTGCTGGCCTTTGCCGGCCTCTTCGCCGCCC 2812
Query 1745 TCGTGCTGTGGCTGTACATCTACCCCATTAACTGGCCCTGGATCGAGCACCTCACCTGCTTCCCCTTCACCAGC 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TCGTGCTGTGGCTGTACATCTACCCCATTAACTGGCCCTGGATCGAGCACCTCACCTGCTTCCCCTTCACCAGC 2886
Query 1819 CGCTTCTGCGAGAAGTATGAGCTGGACCAGGTGCTGCAC----------------------------------- 1857
|||||||||||||||||||||||||||||||||||||||
Sbjct 2887 CGCTTCTGCGAGAAGTATGAGCTGGACCAGGTGCTGCACTGACCGCTGGGCCACACGGCTGCCCCTCAGCCCTG 2960
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 2961 CTGGAACAGGGTCTGCCTGCGAGGGCTGCCCTCTGCAGAGCGCTCTCTGTGTGCCAGAGAGCCAGAGACCCAAG 3034
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3035 ACAGGGCCCGGGCTCTGGACCTGGGTGCCCCCCTGCCAGGCGAGGCTGACTCCGCGTGAGATGGTTGGTTAAGG 3108
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3109 CGGGGTTTTTCTGGGGCGTGAGGCCTGTGAGATCCTGACCCAAGCTCAGGCACACCCAAGGCACCTGCCTCTCT 3182
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3183 GAGTCTTGGGTCTCAGTTCCTAATATCCCGCTCCTTGCTGAGACCATCTCCTGGGGCAGGGTCCTTTTCTTCCC 3256
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3257 AGGTCCTCAGCGCTGCCTCTGCTGGTGCCTTCTCCCCCACTACTACTGGAGCGTGCCCTTGCTGGGGACGTGGC 3330
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3331 TGTGCCCTCAGTTGCCCCCAGGGCTGGGTGCCCACCATGCCCCTTCCTCTTTCTCCTCCTACCTCTGCCCTGTG 3404
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3405 AGCCCATCCATAAGGCTCTCAGATGGGACATTGTGGGAAAGGCTTTGGCCATGGTCTGGGGGCAGAGAACAAGG 3478
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3479 GGGGAGACACAAGTAGACCTCAGGTAGAACGACACTGGGCGGAGCCACCCCAGGGCCTGCTCCCAGGGAGTGCT 3552
Query 1858 -------------------------------------------------------------------------- 1857
Sbjct 3553 CGAGGCGCATCAGGCCCGTTTTTTACCAGTTTATATCACGGTCTTCATTTTTAAAAGTAACGCTAACTTTGTAC 3626
Query 1858 --------------------------------------- 1857
Sbjct 3627 GGACGATGTCTCATGGATTAAATAATATTCTTTATGGCA 3665
