Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12631
- Subject:
- XM_006718328.4
- Aligned Length:
- 2538
- Identities:
- 745
- Gaps:
- 1791
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTATTCCTGATCCTTATGAAGACTTTATGTACCGTCACCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAATATTATGGCTACTTTAAAGCTCAGAGAGGCAGTTTACCAAACTCTGCTACGCATCAGCATGTTCGGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCTTCTATATTCACATATGCTGAGTTTACCACATCTTAGGAGCAGACAGCTTCTTTATGATGAGTTGGATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGTAAACCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATGGCCAATTGAATGTGAGGTCATCAAGGAAAACATCCATCATATTGAGTGGGCTCCACCTCAACCAGAATAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCTATCAGCCTAAAGGAAATGAAAAGGTACCAGAGATTGTAGGAGAGAAAAAAGGAACAGTTGTCTATCAATT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGATTCAGTGCCTATAGAAGGTTCCTATTTTACCAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAAGGAAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGCTGTCACGTTGCAAGGACCAGAAGATAATACTCTACTGTTTGAATCAAGGTTTGAGAGTGGGAATCTGCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAGCTGTCAGAGTAGACACCTATGAGTATGAACTCACCTTGCGAACTGACCTCTACACTAACAAACACACTCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGGTTTTATTTTCGTGTTCAGAACACCAGAAAAGATGCTACCTATCGCTTCACCATTGTCAACTTGCTAAAAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAAGAGTCTTTATACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGAGGAGAGAAGGAAATGAAATCAAGTACTACAAGAACAACACGGATGATGGGCAGCAGCCCTTCTACTGTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACGTGGACCATTCAGTTTCCATATGACCAGGACACTTGCTTCTTTGCACACTTCTACCCATATACATACACTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATTTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCAAACTTTATGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGAGCCTAGCAGGAAATACCGTTTACTTGCTCACCATCACCAACCCATCCCAGACCCCTCAAGAGGCAGCTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAGAAAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAATGGCTCCTGGGTTATGAAAGGCTTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGACTTCATCCTTAGCAACTCCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCTTCAAGGTGCTTCCCATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTAAATCCAGATGGTGTGATTGTGGGGAATTATCGGTGTTCCTTGGCCGGAAGGGATTTGAACAGGCATTATAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AACCATTCTGAAGGAGTCTTTCCCTTGTATTTGGTACACCAGGAACATGATCAAAAGACTTCTTGAAGAAAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGTTCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAAGAATAATATCTTCCTGTATGGCTGTAATAACAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATCGCAAATACTGGCTTCATGAACGAGTCTTTCCTTTAATGTTATGCAAAAATGCACCAGATAAGTTCTCTTT 1628
Query 1 -------------------------------------------------------ATGTGGCGGATGGGAATCC 19
|||||||||||||||||||
Sbjct 1629 TCACAGTTGTAATTTTAAGGTCCAAAAATGCAAAGAAGGAACAGGACGAGTTGTTATGTGGCGGATGGGAATCC 1702
Query 20 TAAACAGCTACACCATGGAGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATC 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TAAACAGCTACACCATGGAGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATC 1776
Query 94 GAAGATCTGAAGTCCTTAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATTAAGTT 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1777 GAAGATCTGAAGTCCTTAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGAAGTT 1850
Query 168 CACTCAGTGTCTAGCAGAGCTTAAGGAGCTTCTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAG 241
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CACTCAGTGTCTAGCAGAGCTTAAGGAGCTTTTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAG 1924
Query 242 ATGTAGATTTAGAAGGAAGTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGT 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATGTAGATTTAGAAGGAAGTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGT 1998
Query 316 TCTCTCTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAA 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TCTCTCTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAA 2072
Query 390 GAAGAAAAAAAAGAAGTCACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGA 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GAAGAAAAAAAAGAAGTCACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGA 2146
Query 464 AGTTAAAGTTAACAGAAGATACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTC 537
||||||||||||||||||||||||||
Sbjct 2147 AGTTAAAGTTAACAGAAGATACCTCA------------------------------------------------ 2172
Query 538 AAAAACTCAGAGAATTCCAGTTTTTTACCAATGAAAAATGAAAACCCAAGGTTAAATGAGACAAATTTAAATAG 611
||||||||||||||
Sbjct 2173 ------------------------------------------------------------ACAAATTTAAATAG 2186
Query 612 AAGAGACAAAGACACCCCCCTGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGA 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2187 AAGAGACAAAGACACCCCCCTGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGA 2260
Query 686 ATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2261 ATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT 2334
Query 760 ATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATC 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 ATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATC 2408
Query 834 CTTGCACATATACACATACCCG 855
||||||||||||||||||||||
Sbjct 2409 CTTGCACATATACACATACCCG 2430
