Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12631
- Subject:
- XR_242824.5
- Aligned Length:
- 2672
- Identities:
- 565
- Gaps:
- 2105
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTCTGGCCTCGGCGTGACCACCTTGTTTAGCTGAGGAGAAGCTGGGTTGGCAGGGTTTTCTGAAGTCAAGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCTGGGGGGCGCCCGGGGAGGTATTGGCAGTTTTTTCACTTGTCCTCTTGTGGCTTTGTAGCTTCTCTTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TAATCAGCTGCCTATTTGGAAATTGGGCAGGGTTTGCGACTGGATGCTAATGTCACTGACTAGTTTTCAGCCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCATCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTATTCCTGATCCTTATGAAGACTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATGTACCGTCACCTCCAATATTATGGCTACTTTAAAGCTCAGAGAGGCAGTTTACCAAACTCTGCTACGCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATTTGATACCAGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCATCAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGAGATTCACATATGCTGAGTTTACCACATCTTAGGAGCAGACAGCTTCTTTATGATGAGTTGGATGAAGTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGATGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAATTGAATGTGAGGTCATCAAGGAAAACATCCATCATATTGAGTGGGCTCCACCTCAACCAGAATATTTCTA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAGCCTAAAGGAAATGAAAAGGTACCAGAGATTGTAGGAGAGAAAAAAGGAACAGTTGTCTATCAATTAGATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGTGCCTATAGAAGGTTCCTATTTTACCAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAAGGAACTTGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCACGTTGCAAGGACCAGAAGATAATACTCTACTGTTTGAATCAAGGTTTGAGAGTGGGAATCTGCAAAAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTCAGAGTAGACACCTATGAGTATGAACTCACCTTGCGAACTGACCTCTACACTAACAAACACACTCAGTGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTATTTTCGTGTTCAGAACACCAGAAAAGATGCTACCTATCGCTTCACCATTGTCAACTTGCTAAAACCCAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCTTTATACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAGAGAAGGAAATGAAATCAAGTACTACAAGAACAACACGGATGATGGGCAGCAGCCCTTCTACTGTCTCACGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGACCATTCAGTTTCCATATGACCAGGACACTTGCTTCTTTGCACACTTCTACCCATATACATACACTGATTTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAATGCTACCTCCTGTCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCAAACTTTATGCAGGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTAGCAGGAAATACCGTTTACTTGCTCACCATCACCAACCCATCCCAGACCCCTCAAGAGGCAGCTGCAAAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAATGGCTCCTGGGTTATGAAAGGCTTTTTGGAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCATCCTTAGCAACTCCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCTTCAAGGTGCTTCCCATGTTAAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCAGATGGTGTGATTGTGGGGAATTATCGGTGTTCCTTGGCCGGAAGGGATTTGAACAGGCATTATAAAACCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTCTGAAGGAGTCTTTCCCTTGTATTTGGTACACCAGGAACATGATCAAAAGTTCTCTTTTCACAGTTGTAATT 1776
Query 1 -----------------------------------------ATGTGGCGGATGGGAATCCTAAACAGCTACACC 33
|||||||||||||||||||||||||||||||||
Sbjct 1777 TTAAGGTCCAAAAATGCAAAGAAGGAACAGGACGAGTTGTTATGTGGCGGATGGGAATCCTAAACAGCTACACC 1850
Query 34 ATGGAGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTC 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATGGAGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTC 1924
Query 108 CTTAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATTAAGTTCACTCAGTGTCTAG 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 1925 CTTAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGAAGTTCACTCAGTGTCTAG 1998
Query 182 CAGAGCTTAAGGAGCTTCTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAA 255
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAGAGCTTAAGGAGCTTTTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAA 2072
Query 256 GGAAGTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGG 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGAAGTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGG 2146
Query 330 TCTTCCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGA 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCTTCCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGA 2220
Query 404 AGTCACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACA 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGTCACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACA 2294
Query 478 GAAGATACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTCAAAAACTCAGAGAA 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GAAGATACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTCAAAAACTCAGAGAA 2368
Query 552 TTCCAGTTTTTTACCAATGAAAAATGAAAACCCAAGGTTAAATGAGACAAATTTAAATAGAAGAGACAAAGACA 625
||||||||||||||||
Sbjct 2369 TTCCAGTTTTTTACCA---------------------------------------------------------- 2384
Query 626 CCCCCCTGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGGC 699
Sbjct 2385 -------------------------------------------------------------------------- 2384
Query 700 TTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTG 773
Sbjct 2385 -------------------------------------------------------------------------- 2384
Query 774 GCCTAGGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACA 847
Sbjct 2385 -------------------------------------------------------------------------- 2384
Query 848 CATACCCG 855
Sbjct 2385 -------- 2384
