Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12690
Subject:
XM_011530718.2
Aligned Length:
1149
Identities:
989
Gaps:
159

Alignment

Query    1  ATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGTGCCGTCAGAGGCTTCAGAGCC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGTGCCGTCAGAGGCTTCAGAGCC  74

Query   75  GGTGCC--------------------------------------------------------------------  80
            ||||||                                                                    
Sbjct   75  GGTGCCCAGGGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGATGA  148

Query   81  ----------------------------------------------------------------------CAGG  84
                                                                                  ||||
Sbjct  149  AGCTGAAGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGACGGGAGCAGG  222

Query   85  GTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCA  158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCA  296

Query  159  GCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCACGCTGCTGC  232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCACGCTGCTGC  370

Query  233  GGGAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATG  306
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGGAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATG  444

Query  307  CAGATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGA  380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGA  518

Query  381  GGCCTTCAAGG------------AGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCC  442
            |||||||||||            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGCCTTCAAGGAGCCTCTGCTCCAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCC  592

Query  443  CCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCCTGTGCTTC  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCCTGTGCTTC  666

Query  517  CTGTCAGACCCCATCAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGA  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTGTCAGACCCCATCAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGA  740

Query  591  GATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGCTGC  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGCTGC  814

Query  665  GCCAGGCCGCGCGGCGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTC  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCCAGGCCGCGCGGCGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTC  888

Query  739  GTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGAT  812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGAT  962

Query  813  CATGACCGTGCCCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCTTCTTCGGCCTGC  886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATGACCGTGCCCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCTTCTTCGGCCTGC  1036

Query  887  TGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGC  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGC  1110

Query  961  CTGCAGAGGGTGACCGAGGCCCGGCACAAG---------  990
            |||||||||||||||||||||||||||||.         
Sbjct 1111  CTGCAGAGGGTGACCGAGGCCCGGCACAAAGAGAAAAAC  1149

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.