Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12690
Subject:
XR_938346.3
Aligned Length:
2356
Identities:
986
Gaps:
1370

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGTTGGCTGGGCCGACGCAGCCTCCCGCCCGGCTGCACAGGAGTTTCTTTAAGGAGTTTCCCCGGTGTGCCTCG  74

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct   75  GCAGCCTTGCGCTGCTCTAATGGTCCGGACTTCCGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCAT  148

Query    3  GGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGTGCCGTCAGAGGCTTCAGAGCCGG  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGTGCCGTCAGAGGCTTCAGAGCCGG  222

Query   77  TGCC----------------------------------------------------------------------  80
            ||||                                                                      
Sbjct  223  TGCCCAGGGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGATGAAG  296

Query   81  --------------------------------------------------------------------CAGGGT  86
                                                                                ||||||
Sbjct  297  CTGAAGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGACGGGAGCAGGGT  370

Query   87  GTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC  160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC  444

Query  161  CTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCACGCTGCTGCGG  234
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCACGCTGCTGCGG  518

Query  235  GAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGCA  308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAGGCCCAGGAGCTCAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGCA  592

Query  309  GATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGAGG  382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGAGG  666

Query  383  CCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAG  456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAG  740

Query  457  AGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCCTGTGCTTCCTGTCAGACCCCAT  530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCCTGTGCTTCCTGTCAGACCCCAT  814

Query  531  CAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGT  604
            |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  C----AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGT  884

Query  605  TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGCTGCGCCAGGCCGCGCGG  678
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  885  TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGCTGCGCCAGGCCGCGCGG  958

Query  679  CGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTCGTGGGCGTCGTGGG  752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  959  CGCCTCGAGCTGCCTCGGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTCGTGGGCGTCGTGGG  1032

Query  753  CATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGATCATGACCGTGCCCC  826
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033  CATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGATCATGACCGTGCCCC  1106

Query  827  CGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCTTCTTCGGCCTGCTGGGCTACAGCCTG  900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107  CGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGGCCGTGAAGGCCGCCTTCTTCGGCCTGCTGGGCTACAGCCTG  1180

Query  901  TACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGAC  974
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181  TACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGAC  1254

Query  975  CGAGGCCCGGCACAAG----------------------------------------------------------  990
            ||||||||||||||||                                                          
Sbjct 1255  CGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCTGAGGAGCCAGTGCCCCCGCGGCACTT  1328

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1329  CTGGGTGCCAGGTGCATCCTAGCCCGCCCGAGGCCCCTGCCACCCCCCATGGGGGTCTGGGCCCGGCCTCGCCT  1402

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1403  GCCCTCCTGGGCCAGTCACCCCTCCCCCAGCCCACCCAAATAAAGGATTATTTAACTGTCTGAGCTCAGGCCTC  1476

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1477  CCGGCAGCCCCTCCCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCCGAGGGGG  1550

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1551  CAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACT  1624

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1625  GTCCCTACCTCACTGTGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGGCTCCA  1698

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1699  GGGCAGGCGAGACTGGGAAAGGCCCAGCCCTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCATCCTGGCCCT  1772

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1773  GGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTTTGGCTTTTTTAATGTCTTAAAATCTTT  1846

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1847  TACTCAGGTAATTTTAATTTCAGAGAGAAAAACTGAAGTAAATGTCAAAAAACACCAGCCTTAAATCCAAAGGG  1920

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1921  AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGCGTG  1994

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 1995  GCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCA  2068

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 2069  GACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGGCCAGGCCTGTCCCGCTCAGGCCCCCTGCC  2142

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 2143  CGGCGGCCGTCTGTGTGCGGGGCCTCCCTCCTGGCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCA  2216

Query  991  --------------------------------------------------------------------------  990
                                                                                      
Sbjct 2217  GGCCATCTCTGGTTGTGTCTGTGCCGACTCGGTGTTGAATCAAATCAGGTGTGCGTCAGGAGCCGGCTGTGTCC  2290

Query  991  --------------------------------------------------------------  990
                                                                          
Sbjct 2291  TTCCTGCCACACTCGGGGATTCATTCCTTAGAAACTGAAATAAATTCTAATTTTGGAAACTC  2352

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