Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12692
- Subject:
- NM_001290676.1
- Aligned Length:
- 2163
- Identities:
- 908
- Gaps:
- 1197
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGGATTACGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATCTGCTTTTCCAGTCCGATTCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCACATCTGCAGCCTCCACACCATCACCAAAATGCCACCCCCAACCCTGCTGCTTTTATAAATAATAACACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAATGGCAGCAGTGCTGGGTCAGCCTGGCTCTTTCCTGCCCCGGCTACTCATAACATTCAGGATGAGATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGGGTCAGAAAAAGCAAAAAGTCAACAGCAAGAACAACAAGACCCTTTAGAAAAGCAACAGCTCTCCCCGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCAGGTCAGGAAGCTGGAATACTGCCTGAAACTGAAAAGGCAAAAGCTGAAGAAAATCCAGGGGACAGTTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGAAAACAGCAACGGAAAAGAAAAACTACGCATTGAATCACCAGTGTTGACAGGGTTTGATTACCAAGAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGGTCTCGGGACTTCCACCCAACCCTTGACATCCAGTGCATCGTCCCTTACTGGTTTCAGTAACTGGTCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGATAGCACCTTCTTCCTCCACTATAATCAATGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCCTGGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCAGCTAATAATGGTGCTCTCTTGTTTCAAAATTTTCCCCATCATGTCAGCCCTGGCTTTGGTGGTAGCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCCCTCAGATCGGGCCTCTCTCCCAGCACCATCCTCATCACCCCCATTTCCAGCACCATCACAGCCAGCATCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCAGAGGAGGTCTCCTGCCAGTCCCCACCCCCCACCTTTCACACATAGAAGTGCTGCTTTTAACCAGCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCATTTGGCGAATAATCTTAACAAACCTCCTTCTCCATGGAGCAGCTACCAGAGTCCTTCTCCAACCCCCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTCCTGGAGCCCAGGAGGTGGCGGCTACGGTGGCTGGGGAGCATCTCAAGGCCGGGATCACCGCAGAGGGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAACGGTGGAATAACACCCCTGAACTCAATCTCACCTTTGAAGAAAAATTTCGCAAGCAATCATATTCAGCTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAAGTATGCTCGCCCTAGCTCAGCCTTTGCTCCAAAATCCTGGATGGAAGATAGCTTGAACAGGGCTGACAAC 1110
Query 1 ------------------------------------ATGCACTCACTGGAGAGTTCACTCATTGACATAATGAG 38
|||||||||||||||||.||||||||||||||||||||
Sbjct 1111 ATTTTTCCTTTTCCGGAACGCCCCAGGACGTTTGACATGCACTCACTGGAGAGCTCACTCATTGACATAATGAG 1184
Query 39 AGCTGAAAATGATACCATTAAA---------------------------------------------------G 61
|||||||||||||.|||||||| |
Sbjct 1185 AGCTGAAAATGATTCCATTAAAGGTCGTCTAAACTATTCATACCCAGGATCCGATAGTTCTCTGCTTATTAATG 1258
Query 62 GTCAGTCTTCACTGTTTCCAATGGAAGATGGATTCTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGC 135
|||||||||||.|||||||.|||||||||||||||.||||||||||||||||||||||.||||||||||||||.
Sbjct 1259 GTCAGTCTTCATTGTTTCCGATGGAAGATGGATTCCTGGATGATGGCCGTGGGGATCAACCTCTTCATAGTGGT 1332
Query 136 CTGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGG 209
|||||.||||||||||||||||.|||||||||||||||.||||||||||||||.|||||.||.||||||||.||
Sbjct 1333 CTGGGGTCACCTCACTGCTTCACTCACCAGAATGGGGAGAGAGTGGAACGATACTCTCGCAAAGTGTTTGTGGG 1406
Query 210 CGGATTGCCTCCAGACATTGATGAAGATGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATT 283
.|||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||||||.||||||||||||
Sbjct 1407 TGGATTGCCTCCTGATATTGATGAAGATGAGATCACAGCTAGTTTCCGTCGCTTTGGCCCTTTGATTGTGGATT 1480
Query 284 GGCCTCATAAAGCTGAGAGCAAATCCTATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGC 357
||||||||||.||.|||||||||||.||||||||.||.|||||||||||||||||||||||||||||||||||.
Sbjct 1481 GGCCTCATAAGGCAGAGAGCAAATCTTATTTTCCACCAAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGT 1554
Query 358 TCTGTGCAGGCTCTCATTGATGCATGCATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTAT 431
|||||.||||||||||||||||||||.||||||||||||||||||||.|||||.||||||||||||||.||.||
Sbjct 1555 TCTGTTCAGGCTCTCATTGATGCATGTATTGAAGAAGATGGAAAACTTTACCTGTGTGTATCAAGTCCAACCAT 1628
Query 432 CAAGGATAAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCAC 505
|||||||||.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1629 CAAGGATAAACCAGTGCAGATCCGGCCCTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGCTCACAGCCAC 1702
Query 506 TTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATG 579
||||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 1703 TTGACCCACGGAAAACAATATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCAATGATAATG 1776
Query 580 GATCGGCTATATGGAGGTGTGTGCTACGCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGG 653
||||||||.||||||||.||.|||||.|||||.||.|||||.|||||.|||||.||||||||||||||||||||
Sbjct 1777 GATCGGCTGTATGGAGGCGTCTGCTATGCTGGAATCGATACTGACCCAGAGCTCAAATACCCAAAAGGAGCTGG 1850
Query 654 GAGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAG 727
.|||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AAGAGTCGCGTTTTCTAATCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAG 1924
Query 728 AGATAGATAAACGGGTGGAAGTTAAGCCATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGT 801
|||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.|||||||||
Sbjct 1925 AGATAGATAAACGGGTGGAGGTTAAGCCATATGTCTTGGATGACCAGCTGTGTGATGAATGTCAAGGGGCCCGT 1998
Query 802 TGTGGGGGGAAATTTGCTCCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGC 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGTGGGGGGAAATTTGCTCCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGC 2072
Query 876 TGCTATCCATTCTCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATA 949
||||||.||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2073 TGCTATTCACTCTCGTGCTGGCAGAGAATTCCACAAGCCCCTGGTGAAGGAAGGTGGTGACCGCCCTCGGCATA 2146
Query 950 TTTCATTCCGCTGGAAC 966
|||||||||||||||||
Sbjct 2147 TTTCATTCCGCTGGAAC 2163
