Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12692
- Subject:
- NM_001308189.2
- Aligned Length:
- 2136
- Identities:
- 966
- Gaps:
- 1170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGGATTACGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATCTGCTTTTCCAGTCAGATTCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCACATCTGCAGCCTCCACACCATCACCAAAATGCCACCCCCAGCCCTGCTGCTTTTATAAATAATAACACAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGCCAATGGCAGCAGTGCTGGGTCAGCTTGGCTTTTTCCTGCTCCAGCTACCCATAACATTCAGGATGAGATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGGGGTCAGAAAAAGCAAAAAGTCAGCAACAGGAACAGCAAGACCCCTTAGAAAAGCAGCAGCTTTCCCCAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCCAGGTCAGGAAGCTGGAATACTGCCTGAAACAGAGAAGGCAAAATCAGAAGAAAATCAAGGGGACAATTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGAAAATGGCAATGGGAAGGAGAAAATAAGGATCGAATCTCCAGTGTTGACAGGGTTTGATTATCAAGAAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTGGGCTAGGTACTTCAACCCAACCCTTGACATCTAGCGCATCGTCTCTTACTGGTTTCAGTAACTGGTCAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGATAGCGCCTTCCTCCTCTACAATAATCAATGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCCTGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTTCGGCTAATAACGGTGCTCTGTTGTTTCAAAATTTCCCCCATCATGTCAGCCCTGGCTTTGGAGGCAGCTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTCCTCAGATCGGGCCTCTCTCACAGCACCACCCACATCACCCTCATTTCCAGCATCATCACAGCCAGCATCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCAAAGGAGGTCTCCTGCCAGTCCCCATCCCCCACCCTTCACACATAGAAATGCTGCTTTTAACCAGCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCATTTGGCGAATAATCTTAACAAACCCCCCTCTCCGTGGAGCAGCTACCAGAGTCCGTCACCAACACCCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTCCTGGAGCCCGGGCGGTGGTGGATATGGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGCAGAGGGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAATGGTGGAATAACGCCCCTGAACTCCATCTCGCCTTTGAAGAAAAATTTTGCAAGCAATCATATTCAGCTCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAAGTATGCTCGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATGGAAGATAGCTTGAACAGGGCTGACAAC 1110
Query 1 ------------------------------------ATGCACTCACTGGAGAGTTCACTCATTGACATAATGAG 38
||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTTTTCCTTTTCCGGATCGCCCCAGGACATTCGACATGCACTCACTGGAGAGTTCACTCATTGACATAATGAG 1184
Query 39 AGCTGAAAATGATACCATTAA------------------------AGGTCAGTCTTCACTGTTTCCAATGGAAG 88
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1185 AGCTGAAAATGATACCATTAAAGCAAGGACATATGGGCGAAGGAGAGGTCAGTCTTCACTGTTTCCAATGGAAG 1258
Query 89 ATGGATTCTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCAC 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATGGATTCTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCAC 1332
Query 163 CAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTGCCTCCAGACATTGATGAAGA 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTGCCTCCAGACATTGATGAAGA 1406
Query 237 TGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAAATCCT 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAAATCCT 1480
Query 311 ATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGCAGGCTCTCATTGATGCATGC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGCAGGCTCTCATTGATGCATGC 1554
Query 385 ATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCC 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCC 1628
Query 459 TTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTTG 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTTG 1702
Query 533 GTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGCTATATGGAGGTGTGTGCTAC 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGCTATATGGAGGTGTGTGCTAC 1776
Query 607 GCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTTGCGTTCTCTAATCAACAGAG 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTTGCGTTCTCTAATCAACAGAG 1850
Query 681 TTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGATAAACGGGTGGAAGTTAAGC 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGATAAACGGGTGGAAGTTAAGC 1924
Query 755 CATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGGGGAAATTTGCTCCATTTTTC 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGGGGAAATTTGCTCCATTTTTC 1998
Query 829 TGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAGGGA 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAGGGA 2072
Query 903 ATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTGGAAC 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTGGAAC 2136
