Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12692
- Subject:
- XM_017007733.1
- Aligned Length:
- 1406
- Identities:
- 771
- Gaps:
- 457
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCCTGGGGAGCAATGCATGGCAGAGATCATCGTAGAACCGGAAACATGGGAATCCCAGGAACTATGAATCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATATCTCCATTGAAGAAACCGTTTTCTGGTAATGTCATAGCACCACCGAAATTTACTCGCTCAACTCCATCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACTCCAAAATCTTGGATTGAAGATAATGTGTTCAGAACAGACAACAATAGTAATACACTCTTACCCTTACAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAAGAATGGTGAGATCTAGTTTGCAGTTGCCAGCTTGGGGCTCAGATTCACTCCAAGATAGTTGGTGCACTGC 296
Query 1 -------------------------------------------------------ATGCACTCACTGGAGAGTT 19
||||||||..||||.|.||
Sbjct 297 AGCCGGAACATCCAGAATAGACCAGGATCGAAGTAGAATGTATGACAGTTTGAATATGCACTCTTTGGAAAATT 370
Query 20 CACTCATTGACATAATGAGAGCTGAAAATGATACCATTAA---------------------------------- 59
|.||.||.||.||.||||||||.||..|||||.|..||||
Sbjct 371 CCCTTATCGATATTATGAGAGCAGAGCATGATCCTCTTAAGGGTCGATTGAGCTATCCACATCCAGGAACTGAC 444
Query 60 -----------------------------------------AGGTCAGTCTTCACTGTTTCCAATGGAAGATGG 92
|||||..|||||.||.||||||||.||.|||||
Sbjct 445 AATCTGTTGATGTTAAATGCAAGGAGTTATGGGCGAAGACGAGGTCGTTCTTCCCTCTTTCCAATAGATGATGG 518
Query 93 ATT-CTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGG--------GTTCACCTCAC---TGCT 154
.|| ||| ||||||||.|...|.||||| ||| ||| .|||||| ||| |..|
Sbjct 519 CTTGCTT-GATGATGGTCACAGTGATCA----------AGT----TGGAGTTTTAAATTCACC-CACCTGTTAT 576
Query 155 TCAG-TCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGTTTGTAGGCGGATTGCCTCCAGACAT 227
|||| ||||||.|||||.||..||.|.|||||.|..||||||||.||.|||||.||.||..|.||||||||.||
Sbjct 577 TCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCGAAAAGTTTTTGTTGGTGGTCTTCCTCCAGATAT 650
Query 228 TGATGAAGATGAGATCACAGCTAGTTTTCGTCGCTTTGGCCCTCTGATTGTGGATTGGCCTCATAAAGCTGAGA 301
||||||||||||.||.||.|||||.||..|..|.|||||.|||.||.|.||.|||||||||||||||||.||.|
Sbjct 651 TGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTTGGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAA 724
Query 302 GCAAATCCTATTTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTGCAGGCTCTCATT 375
||||.|||||||||||.||.||||||||||||||.||.||.||||||||.||.|||||.||.|||||.||||||
Sbjct 725 GCAAGTCCTATTTTCCACCAAAAGGCTATGCATTTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATT 798
Query 376 GATGCATGCATTGAAGAAGATGGAAAACTCTACCTTTGTGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA 449
|||||.||.|||||||||||||||||||||||.||.|||||.||.||.||.|||||||||||.||.|||||.||
Sbjct 799 GATGCTTGTATTGAAGAAGATGGAAAACTCTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCA 872
Query 450 GATTCGGCCTTGGAATCTCAGTGACAGTGACTTTGTGATGGATGGTTCACAGCCACTTGACCCACGAAAAACTA 523
.||.||.|||||||||.|.|||||.|||||.|||||.|||||||||||.|||||..|.||.||.||||||||.|
Sbjct 873 AATACGTCCTTGGAATTTAAGTGATAGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAA 946
Query 524 TATTTGTTGGTGGTGTTCCTCGACCATTACGAGCTGTGGAGCTTGCGATGATAATGGATCGGCTATATGGAGGT 597
|.||||||||.|||||||||.|.||||||.|.||||||||.|||||.|||||.|||||.|||||.|||||.||.
Sbjct 947 TTTTTGTTGGAGGTGTTCCTAGGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGA 1020
Query 598 GTGTGCTACGCTGGGATTGATACCGACCCTGAGCTAAAATACCCAAAAGGAGCTGGGAGAGTTGCGTTCTCTAA 671
||.||.||.||.||.||||||||.||.|||||||||||||||||||||||.||||||.|||||||.|||||.||
Sbjct 1021 GTTTGTTATGCAGGAATTGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAA 1094
Query 672 TCAACAGAGTTACATAGCTGCTATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGAGATAGATAAACGGGTGG 745
|||.|||||.||.||.|||||.||.|||||.||.|||||||||||.||||||||.||.||.||||||||.||||
Sbjct 1095 TCAGCAGAGCTATATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGG 1168
Query 746 AAGTTAAGCCATATGTCTTGGATGATCAGCTGTGTGATGAATGTCAGGGGGCCCGTTGTGGGGGGAAATTTGCT 819
|.||.|||||||||||..|.|||||.|||.|||||||||||||.|||||.||.||.|||||.||.|||||||||
Sbjct 1169 AGGTAAAGCCATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCT 1242
Query 820 CCATTTTTCTGTGCTAATGTTACCTGTCTGCAGTATTACTGTGAATATTGCTGGGCTGCTATCCATTCTCGTGC 893
||.|||||.|||||.|||||.||.||.|||||||||||||||||.|.|||.|||||...||||||.||||||||
Sbjct 1243 CCCTTTTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGC 1316
Query 894 TGGCAGGGAATTCCACAAGCCCCTGGTGAAGGAAGGCGGTGACCGCCCTCGGCATATTTCA-TTCCGCTGGAAC 966
|||..|.||.|||||.|||||..||||.||||||||.|.|||.|||||.||.||.| |.|| ||||||||||||
Sbjct 1317 TGGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGA-TCCACTTCCGCTGGAAC 1389