Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12695
- Subject:
- XM_017028081.2
- Aligned Length:
- 2520
- Identities:
- 1179
- Gaps:
- 1323
Alignment
Query 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
Query 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
Query 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
Query 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
Query 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCC 370
Query 371 CCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGGATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTAT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGGATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTAT 444
Query 445 TATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGACTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCT 518
Query 519 CACCTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCTGGAAAGGAACCTGTGGCCACAGGGATCCTGGGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCC 592
Query 593 AGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGGAAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTG 666
Query 667 TTCTTGACTCGGCACCGAAACTTGAACCACACCAAACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTCTTGACTCGGCACCGAAACTTGAACCACACCAAACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCT 740
Query 741 TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGGCCTGGAGGTGTGGACCGAGCGGGACC------------ 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTCAGGACTCTGGACATTCAGGTGGCGCTGACCGGCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCA 814
Query 803 -------------------------------------------------------------------------- 802
Sbjct 815 CGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTGCAGTGGCGCCGGGGGCTGTGGGCGCAGCGGCCCCACGAC 888
Query 803 -------------------------------------------------------------------------- 802
Sbjct 889 TCCGCGCAGCTGCTCACGTGGGTGCCTCTGACCCGGACGCGGGTCCCGGGTGGGGCGGCCTCACCTCCCGGCCC 962
Query 803 -------------------------------------------------------------------------- 802
Sbjct 963 CGCCTGGTCACGCCGCGCTCCGCCCCCAGGGGCCGCGCCTTCCAGGGCGCCACAGTGGGCCTGGCGCCCGTCGA 1036
Query 803 -------------------------------------------------------------------------- 802
Sbjct 1037 GGGCATGTGCCGCGCCGAGAGCTCGGGAGGCGACCACTCGGAGCTCCCCATCGGCGCCGCAGCCACCATGGCCC 1110
Query 803 -------------------------------------------------------------------------- 802
Sbjct 1111 ATGAGATCGGCCACAGCCTCGGCCTCAGCCACGACCCCGACGGCTGCTGCGTGGAGGCTGCGGCCGAGTCCGGA 1184
Query 803 -------------------------------------------------------GCAGCCGCCGCCAGCTGCG 821
|||||||||||||||||||
Sbjct 1185 GGCTGCGTCATGGCTGCGGCCACCGGGCACCCGTTTCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCG 1258
Query 822 CGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGC 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCTCCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGC 1332
Query 896 TCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAGTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGC 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAGTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGC 1406
Query 970 TGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGCCCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGCT 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1407 TGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGCCCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGGT 1480
Query 1044 GAAGCCGGCTGGAGCGCTGTGCCGCCAGGCCATGGGTGACTGTGACCTCCCTGAGTTTTGCACGGGCACCTCCT 1117
Sbjct 1481 -------------------------------------------------------------------------- 1480
Query 1118 CCCACTGTCCCCCAGACGTTTACCTACTGGACGGCTCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGC 1191
||||| |||| ||| |||||||.|
Sbjct 1481 -------TCCCC----CGTT----------------------------GGG-----------TGCTGGGCT--- 1501
Query 1192 GCATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCTCTGGG--GGCCTGGCTCCCACCCAGCTCCCGAGGCCTGT 1263
|||| ||||||||||| ||||||| |||||.|
Sbjct 1502 ------------------------------------TGGGTAGGCCTGGCTCC--CCCAGCT-CCGAGCC---- 1532
Query 1264 TTCCAGGTGGTGAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCAGGACAGCGAGGGCCACTTCCTGCCCTG 1337
|..|||| ||| |||||| ||.||..||||.| |
Sbjct 1533 -----------GCGCTCT-CGG--------CATGGA-----------------------CCTCTCACTGCAC-G 1562
Query 1338 TGCAGGGAGGGATGCC-CTGTGTGGGAAGCTGCAGTGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGCACATG 1410
|| ||| || |.|.||||.| |.||||
Sbjct 1563 TG-----------GCCTCT-------------------------------CTCTGCCTTC-CCCACC------- 1586
Query 1411 GTGCCAGTGGACTCTACCGTTCACCTAGATGGC-CAG--GAAGTGACTTGTCGGGGAGCCTTGGCACTCCCCAG 1481
|||..|||||| || ||| ||||
Sbjct 1587 ---------------ACCCGTCACCT-----GCGCAGCTGAAG------------------------------- 1609
Query 1482 TGCCCAGCTGGACCTGCTTGGC-CTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAG 1554
||.|||||| || |||.||| |||||| ||| ||.|
Sbjct 1610 ---CCGGCTGGA--------GCGCTGTGCC-------GCCAGG---CCA-TGGG-------------------- 1641
Query 1555 AGCAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTG 1628
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1629 CAATAGCAACCATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGGCA 1702
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1703 GCATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTG 1776
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1777 CCTCTGCTCCCAGGGGCCGGCCTGGCCTGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTG 1850
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1851 GGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAGGGACCACCCCCTGGGCGGCGTTC 1924
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1925 ACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGC 1998
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 1999 AGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCT 2072
Sbjct 1642 -------------------------------------------------------------------------- 1641
Query 2073 CTGG 2076
Sbjct 1642 ---- 1641
