Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12758
- Subject:
- XM_011542241.3
- Aligned Length:
- 1986
- Identities:
- 1229
- Gaps:
- 717
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCGC 74
Query 1 ---------------------------------------------------------------ATGCAGC---- 7
|||.|||
Sbjct 75 GCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAGCAACT 148
Query 8 TGGA-------AGCCCTGAACCTGCTGCACACACTAGTCTGGGCAC-----GGAGTCTCTGCCGT---GCC--G 64
|.|| .|||..||.|..||.|| |.||.|.|.||.| |||| |.||..||| ||| |
Sbjct 149 TCGACCCCACCGGCCTGGAGCGCGCCGC-----CAAGGCGGCGCGCGAGCTGGAG-CACTCGCGTTACGCCAAG 216
Query 65 GAG---CT-------GTGCAGACACAGGAGC---GGCTGTCAGGCAGTGCCAGCCCT-GAGCA--AGTGCCAGC 122
||| || |.|||||..||||||| .||| ||||| | ||||| |||.|.|||
Sbjct 217 GAGGCCCTGAATCTGGCGCAGATGCAGGAGCAGACGCT-----GCAGT--------TGGAGCAACAGTCCAAGC 277
Query 123 TGGTGAGTGCTGTGCTCTGC-AGGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAG 195
| | |.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 T------------------CAAAGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAG 333
Query 196 GCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCT 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 334 GCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCT 407
Query 270 GGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGG 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 408 GGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGG 481
Query 344 AGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAG 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 AGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAG 555
Query 418 ATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCA 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 ATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCA 629
Query 492 GATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGG 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 GATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGG 703
Query 566 AAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTC 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 AAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTC 777
Query 640 GGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCT 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCT 851
Query 714 AGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCA 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 AGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCA 925
Query 788 GTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATA 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 GTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATA 999
Query 862 GCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAA 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 GCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAA 1073
Query 936 GACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCC 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 GACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCC 1147
Query 1010 CCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTG 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 CCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTG 1221
Query 1084 CTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCAC 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 CTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCAC 1295
Query 1158 ACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAAATTCATGCTGGTCCTGGCCAGCAATCTGCCTG 1231
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 ACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAA-------------------------------- 1337
Query 1232 AGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTC-CACTTCGACCTGCCGCAGCAGGAGGAGCG 1304
||.||.|.|||| ||| ||| ||||||.|.
Sbjct 1338 -------------------------CCCCAGTCACGT----GTCACAC-----------------GGAGGATCA 1365
Query 1305 GGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGC 1378
.|..|..||||| ||||| .
Sbjct 1366 AGTCCTGCTGGT--------------------------------CGGCC------------------------G 1383
Query 1379 TGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTC-GGCTGACGGAGGGCATGTCGGGCCGGGAGAT 1451
|||| ||||| || || ||| |||..|||| || |.|||
Sbjct 1384 TGGC------TGACT-------------CT----------TCAGGC--ACGTTGGGC---TC---CTGGG---- 1416
Query 1452 CGCTCAGCTG--GCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACT-GAGGCCATGA 1522
||||||| ||||| || |||| |||.|| |||.||
Sbjct 1417 ---TCAGCTGCTGCCGT-TC----------------------------GACG-----CTCCCTGGAGCCC---- 1449
Query 1523 TGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGG 1596
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1597 CGCGGGGTCGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTC 1670
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1671 CTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTC 1744
Sbjct 1450 -------------------------------------------------------------------------- 1449
Query 1745 TGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG 1806
Sbjct 1450 -------------------------------------------------------------- 1449
