Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12758
- Subject:
- XM_024448098.1
- Aligned Length:
- 2033
- Identities:
- 1516
- Gaps:
- 424
Alignment
Query 1 ATGCAGCTGG------------AA-----GCCC------TGAA---------CC-----------TGCTGCACA 31
|||..| ||| || |||| |||| || |||.||.|.
Sbjct 1 ATGTCG-TGGCTCTTCGGCATTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCGCCCG 73
Query 32 CACTAGTCTGGG------------------CACGGAGTCTCTG-----CCGTGCCGGAGC------------TG 70
|.| ||.|.||| |.||| || || ||| |||||.|| .|
Sbjct 74 CGC-AGCCCGGGGCCGAGGGCGGCGGGGACCGCGG-GT---TGGGAGACCG-GCCGGCGCCCAAGGACAAATGG 141
Query 71 TGCA-----GAC--------ACAGGAGCG-GCTGTC-AGGCAG-------------------------TGCCA- 103
.||| ||| .|.|||||| ||.|.| ||||.| |||||
Sbjct 142 AGCAACTTCGACCCCACCGGCCTGGAGCGCGCCGCCAAGGCGGCGCGCGAGCTGGAGCACTCGCGTTATGCCAA 215
Query 104 ----GCCCTGA-------------GCAAGTGC--------CAGCTGGTG----AGTGCTGTGCTCTGCAGGAGT 148
||||||| |||.|.|| |||.|||.| ||| |...|||| .|.||||
Sbjct 216 GGACGCCCTGAATCTGGCACAGATGCAGGAGCAGACGCTGCAGTTGGAGCAACAGT-CCAAGCTC--AAAGAGT 286
Query 149 ATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 ATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGGCGCAGGCTGAGGAGAGGAGGAAGACCCTGAGC 360
Query 223 GAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGACAAGCTGGCCCGGCAGCGCTACGAGGACCAACT 434
Query 297 GAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 GAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCAGGAAGCCATGC 508
Query 371 GGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGACCGAGGCCCGG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 509 GGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGAATGAGATGCTGCGAGTGGAGGCCGAGGCCCGG 582
Query 445 GCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGTCCGAGCACCG 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 583 GCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGCGAGCAGATCCGCCTGAAGGCGGCCGAGCACCG 656
Query 519 TCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACC 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 657 TCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTTTGGGGAAGGATTCCGTGCCTTTGTGACAGACT 730
Query 593 GGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTCGGGGTCTACTCAGCCAAGAATGCGACA 666
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.||
Sbjct 731 GGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGGCTGTTGGGGTCTACTCAGCCAAGAATGCCAC- 803
Query 667 GC-CGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGG 739
|| .|||.|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 GCTTGTCGCCGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCGTCCCTAGTGAGGGAGACGTCCCGCATCACGG 877
Query 740 TGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGTGCTGGAGGGT 813
||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 878 TGCTTGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCTCCTCAGTCGACCCCAGGACGCGCTGGAGGGT 951
Query 814 GTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACCAGGAACACCAAGAAGAACCG 887
||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 952 GTTGTGCTCAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCGCCATAGCAACAAGGAACACCAAGAAGAACCG 1025
Query 888 GGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCC 961
..|||||||||||.||||||||.||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 CAGCCTGTACAGGAACATCCTGATGTACGGGCCACCAGGCACCGGGAAGACGCTGTTTGCCAAGAAACTCGCCC 1099
Query 962 TGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCC 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 TGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGTGGCCCCCATGGGGCGGGAAGGCGTGACCGCC 1173
Query 1036 ATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTCATGGATGAAGCAGACGCCTT 1109
|||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||.||||||||
Sbjct 1174 ATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCCTCCTGCTCTTTGTGGATGAAGCGGACGCCTT 1247
Query 1110 CCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGAGCCACACTGAACGCCTTCCTGTACCACATGG 1183
||||||||||||||||||.|||.||||||||.||||||||||.|||||||||||||||||||||||||.||.||
Sbjct 1248 CCTTCGGAAGCGAGCCACCGAGAAGATAAGCGAGGACCTCAGGGCCACACTGAACGCCTTCCTGTACCGCACGG 1321
Query 1184 GCCAACACAGCAACAA---------------------------------------------------------- 1199
||||.|||||||||||
Sbjct 1322 GCCAGCACAGCAACAACCCCAGTCACGTGTCACACGGAGGATCAAGTCCTGCTGGTCGGCCGTGGCTGACTCCT 1395
Query 1200 --------------------ATTCATGCTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAA 1253
.|||||||||||||||||||||||.|..||.||||||||||||||.||||||||
Sbjct 1396 CAGGCACGTTGGGCTCCCAGGTTCATGCTGGTCCTGGCCAGCAACCAACCAGAGCAGTTCGACTGGGCCATCAA 1469
Query 1254 CAGCCGCATTGACGTGATGGTCCACTTCGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATT 1327
...||||||..|.|.|||||||||||||||||||||...|||||||||.||||||||||||||||||.||.|||
Sbjct 1470 TGACCGCATCAATGAGATGGTCCACTTCGACCTGCCAGGGCAGGAGGAACGGGAGCGCCTGGTGAGAATGTATT 1543
Query 1328 TTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGG 1401
|||||||.|.|||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||||||||
Sbjct 1544 TTGACAAGTATGTTCTTAAGCCGGCCACAGAAGGAAAGCAGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGG 1617
Query 1402 AAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCA 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 AAGTGCTCGGAGGTCGCTCGGCTGACGGAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCA 1691
Query 1476 GGCCACGGCATATGCCTCCAAGGACGGGGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCC 1549
|||||||||.|||||||||.|||||||||||||.||.|||||||||||||||.||.|.||||||||||||||||
Sbjct 1692 GGCCACGGCGTATGCCTCCGAGGACGGGGTCCTGACCGAGGCCATGATGGACACCCGCGTGCAAGATGCTGTCC 1765
Query 1550 AGCAGTACCGACAGAAGATGCGCTGGCTGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGA 1623
|||||.|||..|||||||||.||||||||||||||||.|||||||||||.||||.|||||.|.|||.||||
Sbjct 1766 AGCAGCACCAGCAGAAGATGTGCTGGCTGAAGGCGGAAGGGCCTGGGCGTGGGGACGAGCCCTCCCCATCC--- 1836
Query 1624 GTCCAAGGCGAGACCCTCACCTCATGGAGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCAC 1697
Sbjct 1837 -------------------------------------------------------------------------- 1836
Query 1698 ATTTAGGATATGCTCCTGGATGGGGACTGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCG 1771
Sbjct 1837 -------------------------------------------------------------------------- 1836
Query 1772 GTCGGCCGTTCTGCCCCCCAGGGCACCCCCTGTTG 1806
Sbjct 1837 ----------------------------------- 1836
