Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12758
- Subject:
- XR_002957738.1
- Aligned Length:
- 3505
- Identities:
- 1693
- Gaps:
- 1788
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACGCATTTCCGTCGCCGGGAGGAAGGGGTGTGTGTTTCGCCTGCGCAGTGGTCCTGGCCACCGGCTCGCGGCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGAGGCTGCTCCCAGCCGCGCCCGAGTCAGACTCGGGTGGGGGTCCCGGCGGCGGTAGCGGCGGCGGCGGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGAGCATGTCGTGGCTCTTCGGCGTTAACAAGGGCCCCAAGGGTGAAGGCGCGGGGCCGCCGCCGCCTTTGCCG 222
Query 1 --------------------------------------------------------------------ATGCAG 6
|||.||
Sbjct 223 CCCGCGCAGCCCGGGGCCGAGGGCGGCGGGGACCGCGGTTTGGGAGACCGGCCGGCGCCCAAGGACAAATGGAG 296
Query 7 C----TGGA-------AGCCCTGAACCTGCTGCACACACTAGTCTGGGCAC-----GGAGTCTCTGCCGT---G 61
| |.|| .|||..||.|..||.|| |.||.|.|.||.| |||| |.||..||| |
Sbjct 297 CAACTTCGACCCCACCGGCCTGGAGCGCGCCGC-----CAAGGCGGCGCGCGAGCTGGAG-CACTCGCGTTACG 364
Query 62 CC--GGAG---CT-------GTGCAGACACAGGAGC---GGCTGTCAGGCAGTGCCAGCCCT-GAGCA--AGTG 117
|| |||| || |.|||||..||||||| .||| ||||| | ||||| |||.
Sbjct 365 CCAAGGAGGCCCTGAATCTGGCGCAGATGCAGGAGCAGACGCT-----GCAGT--------TGGAGCAACAGTC 425
Query 118 CCAGCTGGTGAGTGCTGTGCTCTGC-AGGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGG 190
|.|||| | |.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 426 CAAGCT------------------CAAAGAGTATGAGGCCGCCGTGGAGCAGCTCAAGAGCGAGCAGATCCGGG 481
Query 191 CGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGAC 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 CGCAGGCTGAGGAGAGGAGGAAGACCCTGAGCGAGGAGACCCGGCAGCACCAGGCCAGGGCCCAGTATCAAGAC 555
Query 265 AAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCA 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 AAGCTGGCCCGGCAGCGCTACGAGGACCAACTGAAGCAGCAGCAACTTCTCAATGAGGAGAATTTACGGAAGCA 629
Query 339 GGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGA 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 GGAGGAGTCCGTGCAGAAGCAGGAAGCCATGCGGCGAGCCACCGTGGAGCGGGAGATGGAGCTGCGGCACAAGA 703
Query 413 ATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 704 ATGAGATGCTGCGAGTGGAGACCGAGGCCCGGGCGCGCGCCAAGGCCGAGCGGGAGAATGCAGACATCATCCGC 777
Query 487 GAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTT 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GAGCAGATCCGCCTGAAGGCGTCCGAGCACCGTCAGACCGTCTTGGAGTCCATCAGGACGGCTGGCACCTTGTT 851
Query 561 TGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGG 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 852 TGGGGAAGGATTCCGTGCCTTTGTGACAGACCGGGACAAAGTGACAGCCACGGTGGCTGGGCTGACGCTGCTGG 925
Query 635 CTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCG 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 CTGTCGGGGTCTACTCAGCCAAGAATGCGACAGCCGTCACTGGCCGCTTCATCGAGGCTCGGCTGGGGAAGCCG 999
Query 709 TCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 TCCCTAGTGAGGGAGACGTCCCGCATCACGGTGCTGGAGGCGCTGCGGCACCCCATCCAGGTCAGCCGGCGGCT 1073
Query 783 CCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCG 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 CCTCAGTCGACCCCAGGACGTGCTGGAGGGTGTTGTGCTTAGTCCCAGCCTGGAAGCACGGGTGCGCGACATCG 1147
Query 857 CCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 CCATAGCAACCAGGAACACCAAGAAGAACCGGGGCCTGTACAGGCACATCCTGCTGTATGGGCCACCAGGCACC 1221
Query 931 GGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGT 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1222 GGGAAGACGCTGTTTGCCAAGAAACTCGCCCTGCACTCAGGCATGGACTACGCCATCATGACAGGCGGGGACGT 1295
Query 1005 GGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGGCC 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1296 GGCCCCCATGGGGCGGGAAGGCGTGACCGCCATGCACAAGCTCTTTGACTGGGCCAATACCAGCCGGCGCGG-- 1367
Query 1079 TCCTGCTCTTCATGGATGAAGCAGACGCCTTCCTTCGGAAGCGAGCCACTGAGGAGATAAGCAAGGACCTCAGA 1152
||||||||||||||||||||||||
Sbjct 1368 --------------------------------------------------GAGGAGATAAGCAAGGACCTCAGA 1391
Query 1153 GCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAA--------------------------- 1199
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 GCCACACTGAACGCCTTCCTGTACCACATGGGCCAACACAGCAACAAGTGAGGGAGCCCCTCGGGTCCTGAGCC 1465
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1466 CCCGGGCAGGGCTGTGCAGCCGTCGCCCTTGGTTCCCACTGAGGGTCCCTGGCTCACAGTGCTGGGCACCAGCT 1539
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1540 GTGGCCTCAGTGTGCCCACCTCAGATGTCCCCTGGGAACGGCCCAGCTCGGGACAGCACGGGGTGTCATTGAGG 1613
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1614 AACATGCAGGGGCCTCCCGGGCAGAGCTGGGGTCAGTCCTGTCTTCACGGCCCTGTGCGCCGCCGCCCCAGCTT 1687
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1688 GCAGGTCCCTCTGCCCCTAGATTTCTGCGGTCCTGTGCCTGCAAGGGAGGTGGTCTGATTGCTGCCGCCCAGAG 1761
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1762 GTCCCCAGTAGGGTGACCGGCCCTATGTCCAGGCTCCCTCTTCCCTCCCAAATCCCTTAATTTTGAGTTTTCTT 1835
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1836 GGTCTCCTGGGCCCCTCCAGCCCCAGTCACGTGTCACACGGAGGATCAAGTCCTGCTGGTCGGCCGTGGCTGAC 1909
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1910 TCTTCAGGCACGTTGGGCTCCTGGGTCAGCTGCTGCCGTTCGACGCTCCCTGGAGCCCTGACTCAGGTCCTTCC 1983
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 1984 CAGAGAGGCAAGGCTGGGGCCCTGCTGAGCCTCTGCTGAACCCGGGCCCCCGAGGTCCTGCTTCTGGCTCGCAT 2057
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 2058 GGCCATAATCTTGACAGGGACTCTGGGTCCCGCATCCCTGCTCCCAGCACAGCGGGGCTCAGGTAGCAGGAGGG 2131
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 2132 AGTGGTGTTCCCGGCACTGCCTATCAGGCTGGGCGAGGGTCAGCGGGGAAGTACCACACAGGGCAAGAACAGAG 2205
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 2206 GCCCGAGAAGCCGGGCGGGGGGCAGCTGGGCGTGGTGGGGCAGGCAGGCGGGTGACCAGGGCTGTGGCTGCGTT 2279
Query 1200 -------------------------------------------------------------------------- 1199
Sbjct 2280 CTCCCCATGTTTCCTGTGCTCACAAGCTGCCGCTTTAGATTCTCCCAAAAAGTCTCCCCGAGGGGGCTGAGGAG 2353
Query 1200 -------------------------------------------------------------------ATTCATG 1206
|||||||
Sbjct 2354 CCCCCGTTGCCCTCGGGGCATCTCAGCTGGCAGCCCCAGCGTTTCCTTCCCCATCCCTGTCCTACAGATTCATG 2427
Query 1207 CTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTT 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2428 CTGGTCCTGGCCAGCAATCTGCCTGAGCAGTTCGACTGTGCCATCAACAGCCGCATTGACGTGATGGTCCACTT 2501
Query 1281 CGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCA 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2502 CGACCTGCCGCAGCAGGAGGAGCGGGAGCGCCTGGTGAGACTGCATTTTGACAACTGTGTTCTTAAGCCGGCCA 2575
Query 1355 CAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACG 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2576 CAGAAGGAAAACGGCGCCTGAAGCTGGCCCAGTTTGACTACGGGAGGAAGTGCTCGGAGGTCGCTCGGCTGACG 2649
Query 1429 GAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGG 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2650 GAGGGCATGTCGGGCCGGGAGATCGCTCAGCTGGCCGTGTCCTGGCAGGCCACGGCATATGCCTCCAAGGACGG 2723
Query 1503 GGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGC 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2724 GGTCCTCACTGAGGCCATGATGGACGCCTGTGTGCAAGATGCTGTCCAGCAGTACCGACAGAAGATGCGCTGGC 2797
Query 1577 TGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2798 TGAAGGCGGAGGGGCCTGGGCGCGGGGTCGAGCACCCCCTATCCGGAGTCCAAGGCGAGACCCTCACCTCATGG 2871
Query 1651 AGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGAC 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2872 AGCCTGGCCACGGACCCCTCCTACCCCTGCCTTGCCGGCCCCTGCACATTTAGGATATGCTCCTGGATGGGGAC 2945
Query 1725 TGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACC 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2946 TGGGCTGTGCCCAGGGCCTCTGTCCCCCAGGATGTCTTGTGGTGGCGGTCGGCCGTTCTGCCCCCCAGGGCACC 3019
Query 1799 CCCTGTTG------------------------------------------------------------------ 1806
||||||||
Sbjct 3020 CCCTGTTGTAGGCACTGGCTAGGGAGGGGCAGGCCTCCTTCCTGCCCCTCGAGACACTCTTGGGAGATGCATTT 3093
Query 1807 -------------------------------------------------------------------------- 1806
Sbjct 3094 TCCGTCTGGCTCACAGGGGGAGGGTGAGGCTTTGTACCCCAGCCCCTGCCCAGGCCACTGTGAGGGTGGGTGCT 3167
Query 1807 -------------------------------------------------------------------------- 1806
Sbjct 3168 GGCTGAGCCCCTGGGGCAGAAGGAGTGGGGCAGGCGGGGTCTTTGTTCTCGGCTCCCACAGCAGAGCCAGGTGA 3241
Query 1807 -------------------------------------------------------------------------- 1806
Sbjct 3242 GGGGGGGCCTGCCAGGACTAGACAGAAGTGGGGCGGCCTGAACCCTGCTTCCAGCCATGGCCAGGGGCCACGGA 3315
Query 1807 -------------------------------------------------------------------------- 1806
Sbjct 3316 ACCCGGCAGGGGTGTCTGAGGCCGCCCTGTCAGCTGGCCGGTCCAAGCCTGTGGCTGGAGCTGGTGTGTGTTTA 3389
Query 1807 --------------------------- 1806
Sbjct 3390 TCTAATAAAGTCCCACAGGTGCCTCAC 3416
