Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_022006.1
- Aligned Length:
- 4325
- Identities:
- 190
- Gaps:
- 4111
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCATCTCATCTCAGATGCCTGGCAACATCTAATTCCTCAGCTCCTTTTCAGTAATTTCAGTTCTATTTTCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCTATCATTCTGGTGTTTTCATTGCATTTTCTTATAAAAGAGATCCAGATTTATTTTGGAAATAGATTTGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACGAAAACATCCTATAGAAGCAAATCCTAAACAAATATAAATATTTGACCATGATTATGCAAAGAAAGCTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCTTCCTCCTCTGTGTCACAGAGACCCTCGGGAGGAACTCCAGGGAGAATGGAAGCTTGGGAGTCATCCCAAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTTGCTCAGGTGCGAAATCCCCTGCCCTCTGCCTGGCACTGATAGGGACGGATCAGTTTCTCTGCCTGGAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCAGCCTCCTGTGACCTGGATACATTGGAGCCTGAACACGGGAACAGAAGGGTCTCTGGGAATCCAATCTCAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTTGGGCTTACAAAGTGACCAAAGTCAAATGCTGGTCTGTGAGAGAAAGAGGAGGCAGACACATCGGGGGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGAGAAATACTTTGAAGCACCCCGCTCACCATGGTATGGGGAAGAATTTGGCCACATCCCTGCCAACTGCTGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTCTTGGACTGGGAAAGGGTCAGTTGCTTGTTTCTATCAGATTCATGGACACCACCAAGAAAAGAGGCCAGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGAGACATTCAATATTTGTTGAAACACAGAGGTTTAACTGATCATTGAGGTACACAGGGTGATAGGAAGAGTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAACTTGAGAATCTGATGGATTTTGTTTAAAGTTAGGACTAGGCTACTGACTACCCACCCTGCTAATTGTCTTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGAAGTTATTTAACCTCTCTGAACCTCAGCTTCTCATCCACAAAATAGGACACTAGCACACAGTGGGCTATCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATATATATTTATTGAATTGAAATGGGAGTATTCAAAATTATTTGGGTTGTTGGCTTAAAATAAGCAGAATAATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATTCCTGTTCATCTGGAATCTAATTGTCCAATTTGGAGTTTCAGATGTAACAAAGATCCTAATGACCTAATA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTATTGGGGTAATCCTAAAATTTATTAGGTGATCTGCAAGTTCCATGATGATTGTATACTGGAGGAAATGCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGCACACAGACCTTCCTAGGAGTAAAAGACTGATGTGAATTTGCAGCACTACTTAATTATAAGTAATTGTTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGAACACACACACAAACACACACCCACAGAACTCACACTATAAGATAGGAGGGGCAAATAATGACATTTGACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAATGAGCTCTTGCAGAGCTCAACGAGTCTAAGTTTCCTCCCTAATATCTTAACAGGCTACAGTATACACAGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTTAAGTAATGTACTTGTTATCCAAACACTAGCAGACATTTAACTGGAATCCAGGAGCATTTTGTCAAGAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAAAAGAACTAACCAAAGAAAAAGAAAAGTAGAGAGTTTCCCAGCTGTTTTACCACATCACAACTTCAAAAAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAAGCCTGTCCTTGCCTTGTCCCTGATGGCTCTGCCAGCAGAGTGAATGAATTGGAGCAGATTTAGGTTTTAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AATGCCTCCTAATATCATTTGGGCAGATTAGCTTACATGGCTGGACATTGTGCTCCCAGCCACAGGGAATGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTTCCTGTTGGAAGCTCTGACAGCCACTGCCACGGTGAAATATCAGGAGCCTCCTAACATTTTTCTTGATTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTAAGAGTGAACATTAGACATATTAAAAACAACAACCCAATCATTAAGCCCTGTGAGGTTTTCCTAGGAGCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTCTATCGCTTTAATCAGATTACGGACAACTCATTCTCATCCCAGCCATTTATCTTCTTTGTTTACACACACA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAAGTGGCATTCTTCTTAGCATCAAAAAATAGTAATCAAAATTGAGAACAACAAAAGACCTTTCATTATTTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGTGTTAAGTAACATCTATTTGCCTTCATTAGTTTCTAAACAACGAAGTACACTGGTTCTGATTAAAGCTGGCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTGTTAATTATATCCGAGGTCTGGGATTGTTTTGTCTACAATAAAGGATTGCTGAAAGCTGAAATTTGAGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCAGGCCCCAGAAATCACCTGCCTCTATGTGTTTCCTCAGTGAGAGTTTCCAGCCTGAGAATGGCAGAAGCGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ATGTGAGCTTGTCACAGAAAGTTTTTTTTGCTTTGTTTTGTTTTGTTTGGTTTTTAAGCCCTCGGTTTTATTGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCATTTTATGGGCTGGAGTTAAATGGAAGTACAATGCAGTTTGCTGTCTTACTGCTCAGCACTAACAGCCATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGAGCCATAATTAGAAGTAAAACCACCACATAAATAACATGGTAGAAAAATTGCCACAGTGAGAAGCCAGACTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGGCGACGGGAAACTTCAGCGGGTCTTGAGTATCCATCATACTTAAGGGGCACCGCGTATTTTAGCCCATATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTCTTACTAAAGCCAAAATGGGAGCCATTTAGACTTTCGAACAAGCTTTTAAAAATAGAGAATGTAGGCTTAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CAGACTGCCTGCTGCTAAGTGTGATGAAGAAACCTGTCACCTGGAGGCTACGACAGCTGGAAGGGCTGGGAGGG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AGAGCCCTGGGAGCCCAGGGGTGAGGAAGGGAAGATAAACAGGAGAGGAAGAGGAGGCCTGGACTCTCCACAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGCAAGGTCTAGACATTTCACTGCAAAGCCTAAGAGTCTGCACACCGTTGAGCACAGCAGCTTAGACTTCCGCC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGGAACGTGTGAGGCTGGGACGCCTTGCAGATTTTGCTTTCATGACCTGTACTCAGCGATGAAGTGGGAGCAG 2812
Query 1 --------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC 48
||||||||||||||||||.|||||.||||||||.||||||.|||||||
Sbjct 2813 GTAGACTAGTTTTTTTTTTTTTTTTAATGGAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTC 2886
Query 49 GGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAG 122
||.|||||||||||||||||.|.|..|.||||||||||||||||||||.|||.||.||||||||||||||||||
Sbjct 2887 GGTTCACTGCAACCTCTGCCACCCATGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAG 2960
Query 123 GCACACGCAACCATGC--CCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGG 194
|..|..||.|| ||| |.|||||| |||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2961 GTGCCTGCCAC--TGCGTCTGGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGG 3029
Query 195 CTGGTCTCGAACTCCTGACCTCAAG------------------------------------------------- 219
|||||||.|||||||||||||...|
Sbjct 3030 CTGGTCTTGAACTCCTGACCTTGTGGTCCACCCGCCTCGGCCTCCCAAAATCCTGGGATTACATGCATGAGCCA 3103
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3104 CGCGCCCAGCCTAGACTAGCATTTTTGAGTACCCACTATCTCCTTGGCATTTTACTTCCATTTTAATTCTCATA 3177
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3178 ACAGCCTTAGGACGCCAATGAAAAGGAAGAGAAAATAAAGTGTGTTCTGTGCCTGAAAATGGCCTTAAAGAAAC 3251
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3252 AAGGACCAACAGCTGGAGCAGAGTGGGGCTGCCCATACGCAAAGAGACAACAAGTAGGAATTAACATAAGGCAT 3325
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3326 ATCACGTGGATGCCATAGAACTATCACAGCAATTTCTTTTTTCCCCAAGTCAGCCTCTCTTGTACAGGGGATTA 3399
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3400 GAAAACAAACCCAAGAGAATAAACTTGAAATGGAAGGAACGTGCTTTGTAGTCGAGTGTTTTTCAAAGCCTGCA 3473
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3474 TCATTTTAAAAACTGATTTAAGTATATTCATTTGCTTTCTAAAATAAGTCATATGTATGTTTCTACTGATCGGC 3547
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3548 CAGAATAGTTAAGGTCTGTCTGATCTTCATATGGAATGAAAGGGGACATTCTTTGGATATTCTGGAAGTCCACA 3621
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3622 CGTGTTCTTTACAGAGTTTGGTTTGCTTTCTCCGTTTCTTCCTTCCTTTGCAAAATCAAACAAACAGGAATAAA 3695
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3696 AACCAAACCAAAACAAAATTAATGAAAACCCTTGTGTTGAGGACTTTGTTTTGTTTTAAATGTGTCTGGTATTA 3769
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3770 AGCAGTATGTTTAGTGAAATGACTTTAAACTTAAGTAGGAAATACAGCTCCATTTCACACGTGGATTTTGTCTG 3843
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3844 CATTTACATCTCTGCAGGCCTCACATGCCGTGACACCAGACATTTTTTTAATTAAGATATGAAGTGCTCATTTT 3917
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3918 TTTTTTGTGGAACTGCTGTATTCTAACAAATTTACTACACGTCTCAGAAAACACATAGCTTTGCCAAAGTTGGT 3991
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3992 GAGTAGCCCAGCATGGTTTATCTCCAGCCCACAGCTCTTTCCCTGAATTCAATACTGCAGGCACAATTTAATGC 4065
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4066 AAACCCAATTTATGACTTAATGCTCTAGGGACCGTAGTGGGAGATTGTTACATTATTCTTTTCTAATCCTATTT 4139
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4140 GTGTTTTAATTTGCTAAGTCTGTAATGAGGTGCATGCCTTGAATATTCAAGATCTTTGACATTGCTTTTGACTT 4213
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4214 TGTTTAATATAATAGATTTTACAGTTTGCATTAAATACCCAGGTGCTTCGGTCAGTATTATCTCTTTATTTTCT 4287
Query 220 --------------------------------- 219
Sbjct 4288 CAACTAGAGTGAATAAAATTACACGATGAAAGT 4320
