Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_046429.2
- Aligned Length:
- 1880
- Identities:
- 189
- Gaps:
- 1665
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTGCTCAGTAGAAGCCATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCAGAAGCACTGTCCACTTTCTATCTCCAGCAGCATATTAATTTGCACATGCCAGGATGGTCTCGATCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGACCTCGTGATCTGCCAGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCATGAGCCACAGCGCCCGGCCAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCCGCACATCTTAAAGGACAAGAAGAGGTATTTACGCCTCCTGGAGATTCACAAAATAATGCGGACGCTACCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGAGTCCGGTCACAAGGGCCCAGCCCATCACAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACACCCAGGTATTTCCCCAGAAGAAGACTCCAGAGAGGAAGCTCATCTGAGGAAAGCTGAGAGGGAAGAGAAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAACATACTGAAGCAAAAAAAAGCCTATCCTTCAGAAAAAAGCAACAAAAAGATTTCTGTTTTATCTTTCGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AACTAAAACTATTGGATTTGAAGATTAAGTATCCTAAACATCACTGACTAGAAACTGTTCTCTTTGTCAGCAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAAGATATTGGATCATAGGTTATTGATGGTTGCAAAATTGGACAATAACCACGTTATTTTTATCCTCAACCTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGGTCACAGGATATTTATGCAAATAAAATCTTTAAATGGGTGGCTCTAGTAATTCCTATCCATACTAAGATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGAGAGAATCCATCTCCTCCTCTAAATTAAACAGGATTTAAATAAATTGAGATCATTATAAACCACACGAAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTGATGACACCGTTTTTATACTCATTGGAAAACATACAGAGCAAGGTGCATTGACAAAGTAAACTTTAAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAATTATAAAGCTTAAAGCAATTAAAAAGTTATGAGGAGTCTGACTGTAGCTAATACTTTAAAGATATAAACTG 962
Query 1 ---------------------------------------ATGGAG------TCTCATTC-TGTCGCCCAGACTG 28
.||||| |.|||.|| |||..|||||.|||
Sbjct 963 ACTTGTCTAACCCAAATAATAATAATTATTATTATTTTCTTGGAGACAGAATTTCACTCTTGTTACCCAGGCTG 1036
Query 29 GAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCC 100
||||..||||| || .||||||||||||||||||||||||||.||.|.||||||.||||||.||||||.|||
Sbjct 1037 GAGTTTAGTGG--TGCTGTCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCC 1108
Query 101 TCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGG 174
|||..||||||||||||||.|||..|.|||.||||.|||.|||.|| ||||||||||||||||||||||||||
Sbjct 1109 TCCCAAGTAGCTGGGATTATAGGTGCTCGCTACCAAGCCTGGCCAA--TTTTTTGTATTTTTAGTAGAGATGGG 1180
Query 175 GTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------- 219
|||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1181 GTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAGAGTG 1254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1255 CTGGGATTACAGGCATGAGTCACTGCGCCCAGCCCCAAATAATTACTTTTAAACTATAGTATCTAAATTTACTT 1328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1329 TAATGTTGACTTCAACTGATGCAAATTAATTTGATAATTTTCTCACTGTTTCCCGTTATCATTACATAGATGCT 1402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1403 GGCTAAAATAATATACTTCCTCTCAAACTTTTAACGTAATTCCAGGTTCAAAATGCCTGATTAAACTGCTACAA 1476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1477 GAATATTCTGGTACCTCTAGAACTCCACAGAGATAAGTTCACTCAACTCTTGGAACCTTGTATTCTCAGGGTGC 1550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1551 AATATGAGAAACAAATCCCACAGATTGCATTGATTGGTTATTTGTTTTGGCCACTCTGTAAAACACATCTTCCT 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 GTTTATGCCACTTATCTTGCCTGTAACATAAGAACTTTAGTTCTGCATATGTGGTCAGTGGTTTGCACTTTTTC 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 CTCCCAAGATCTACATGCAAAAGTTGCTGTTGCTGCTGCTGCTACAAAAACAGAAAAAAAAAAATCAGGATGAA 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 GACATGAAAGGACTTTGGGAATGGTTGCCCTAAAAAAGGAAAGAGAGATAAAATCATCATGCTATGTTTCTTTG 1846
Query 220 ------------------------------ 219
Sbjct 1847 CTTTATTAAAATGATCAAAAAAGAAAAAAA 1876
