Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_145697.1
- Aligned Length:
- 3073
- Identities:
- 190
- Gaps:
- 2859
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGTGGGAAACCGCGCTGGACGCTGAGAATGTGCGGAAGGATCCTGAGGGGAGGACGCGAGACAGCGCGAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGACGAGGAGAGTTAGGGTTGGCCGGGAGGGTGCGAAGATGAAGCGACCACTGGAGGCTGTGAGGGTGAAAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCAAGAATCGTCTAGAGACGGGCTGGGCCGGTGCTGGGGCCAAAGGCTTCTGTCTGTCAGGCCCTTTTTGGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCACTCTAGAAAGAAGAGGCGGAGACGCGAAGAGATCGGGTTAGAGTCAGATTTTCGAAGCACGGAGATGGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCAATGAAAGGACGAGGAAAGACGAGAAACCAGCGGCCGGAGAACGGAGGTGGCCGCCGCCGTCCTTTGCTCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGGGGCTGGGCGCCGCCCGGAGAGCCCTCCCGGAGGGGGCGGGGCGGGGCCGGGTGAACAGAGCTGGGCGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTCGCCAGCTCTTCCAGGCGCCCTGGGCAAGCAATAGTTCAACAATTTTTATGAATTTCTAATCCAACCTCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGCCAATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAATTTTTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAATGGAATCTCATTCTGTCACCAGGCTGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTGGCCCTCAGCTTACATCTAGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGAACAGAGATGTTTTCTCTTCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATTCACCCTGGTTGGGTCGTGTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGGGAAATTGAATGTACCAATGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAGTGGGATCAGCTTTCCCTAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCTGTTAGTAATGGGAAGGCAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAGGCCCAACTAAAGATAACCTC 1332
Query 1 -------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAG 31
|||||||||||.|||.||.||||..||||||
Sbjct 1333 TTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCACTCTCTCACCCAAGCTGGAG 1406
Query 32 TGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCG 104
||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |.||||||||.||.||||||.
Sbjct 1407 TGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-AATCTCCTGCTTCAGCCTCCC 1478
Query 105 GAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTT 178
.|||||||||||||||||||.|||.|.||||||||||||||| ||||||||||||||||||||||.||||||
Sbjct 1479 AAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATAGGGTTT 1549
Query 179 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------- 219
||||||||||||||.||||||||||.||.||||||||||||
Sbjct 1550 CACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCCTCGGCCCCCAAAGGTGTGAG 1623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1624 CCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTTGTTTGCTTGTTTTGTTTGTT 1697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1698 TGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCTAGGCTTGAGTGCAGTGGTGC 1771
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1772 AATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAGTAGCTGAGA 1845
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1846 CTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAGGTCTCACTATGTTGCCCAAG 1919
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1920 GTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCTCTGGGATTGCAGGTATGAGC 1993
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1994 CGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCCTAAGTATATTACAAGTCCCT 2067
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2068 TGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACTCAATGATGGATAAAATAGTT 2141
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2142 TTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAAAGTGTATAGATGGGTGGAAG 2215
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2216 GGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAATGAGTCCCTGGGTTCACTCAA 2289
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2290 GCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAATGAGTTTGAGGCCAATATTA 2363
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2364 TTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTGTTGCC 2437
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2438 CAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATTCTCCTGTCTCAACCTCCCAA 2511
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2512 GCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAGAGACGGGGTTTCTCTGTGTT 2585
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2586 GGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAGCCTCCAATATGATTTTCTAA 2659
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2660 TAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTGAAAATATCTATTTAAGTTTC 2733
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2734 TTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAACATATTCTATTCATTTATTTT 2807
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2808 ATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCTTGTAAACCTGACTTAATATT 2881
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2882 GGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTAAAAATATTTTGCTATTTCTA 2955
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2956 TACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATGACTTGAAATTTATGTTATGA 3029
Query 220 --------------------------------------- 219
Sbjct 3030 CTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG 3068
