Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_163905.1
- Aligned Length:
- 3120
- Identities:
- 189
- Gaps:
- 2905
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG 148
Query 1 -------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGT 37
|||.|||.|||.||||||.|||||.|||||.||.|.|
Sbjct 149 CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATGAAGTGTCACTCTGTCACCCAGGCTGGAATGCAAT 222
Query 38 GGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAG 110
|||..|||||||||||||||.||||||.||||| |.||| ||||||||||||.|||||||.||||||.||||||
Sbjct 223 GGCGCGATCTCGGCTCACTGTAACCTCCGCCTC-CCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAG 295
Query 111 CTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT 184
||||||.|||||||.|..||.||||||||||||||| ||||||||||||||||||||||.||||||||||||
Sbjct 296 CTGGGACTACAGGCGCGTGCCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATTGGGTTTCACCAT 366
Query 185 GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--------------------------------------- 219
.||||||||||||||||.||||||||||||||..|
Sbjct 367 ATTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAA 440
Query 220 -------------------------------------------------------------------------- 219
Sbjct 441 GTGTGAGCCACCGCGCCCGGCCAGGAAAGTTTTAAGGAGAGTCACCACCAGCTTTGTAACCAGTCTGGGTGTTT 514
Query 220 -------------------------------------------------------------------------- 219
Sbjct 515 TCCACTCAGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGATGATGAG 588
Query 220 -------------------------------------------------------------------------- 219
Sbjct 589 GAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATAATTTTGT 662
Query 220 -------------------------------------------------------------------------- 219
Sbjct 663 GGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAAT 736
Query 220 -------------------------------------------------------------------------- 219
Sbjct 737 ATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCG 810
Query 220 -------------------------------------------------------------------------- 219
Sbjct 811 TCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGGCTGTAGA 884
Query 220 -------------------------------------------------------------------------- 219
Sbjct 885 CTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTC 958
Query 220 -------------------------------------------------------------------------- 219
Sbjct 959 CACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGTG 1032
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1033 GAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAG 1106
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1107 CAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGATG 1180
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1181 TCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAAAATAT 1254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1255 GGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGA 1328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1329 GTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAAT 1402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1403 ACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTC 1476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1477 TTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCA 1550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1551 CATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGG 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 TTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTACAGTGTG 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 GACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCC 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 TGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGCGAGAGTG 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 GGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCT 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 GACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCC 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 CAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAAGAAGG 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 ACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCC 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 AAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCAGCGACCG 2216
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2217 CTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAATTTGAGG 2290
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2291 GTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAA 2364
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2365 GAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCC 2438
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2439 ACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTTTTTTTTTTAATTTTTTATACTTTGGTGT 2512
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2513 TTCACTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAGTTTAGTCCAGATTTTTACAGAGGATACA 2586
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2587 TCTATTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACCTTCTAATTTCTTTATTTCTCAAAGCAGA 2660
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2661 TAATTCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTAAAATTCCTTTTCCAAATCATGTTGATTT 2734
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2735 TGCTCTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCTGATTGCTTC 2808
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2809 CTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGG 2882
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2883 CGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAG 2956
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2957 GGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGACCCAG 3030
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3031 AGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGATTAAAAACGTTA 3104
Query 220 ------------ 219
Sbjct 3105 AGAACTGCGTTA 3116
