Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
XR_002957252.1
Aligned Length:
2670
Identities:
187
Gaps:
2462

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGCACGCCGCGCGGAGGACGAAGAGGCTGCACGCACAGCCGCTGCCGGGGGTCGGGGCCAAGTGCGCGCCTCGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGAGGACGAAGAGGCTGGCGTGCCCGGTGGCTCGGCTAGCTCCCGGGTCCCGGCCCCGCCTGGAGGATGCGGCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTGGGGGAATGGGAGCGGCCGGACCTCCCAGCCTGACAGTGCATCAAGAGCTTTGCGGAGCCTACAGCCCGGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACGACTGAGGCCCTCCCGCTGGCGAGCTGGCCGAGGGCTCGTCCCTCTCCAGCTAAAGCGCCAGCTTACGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TACAGCCAAACTGCCGGCTCTCATCGGCTGTGGGAGCAGGAGGCCCCCAGGGGTAAATCCCGGAGCCTCGTCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGAAGCCTGGCGCTTGTGTCTCAGAAGGTGCGGGACCCACAGGGACACTTGAATCAGCAGGCTCACGACCCCCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCCCCCTGCCCCCGCCTGTGTTTGCCCTGGACCTCCAGCTAGGGCTGACCACTAATTCTGTCATGTGACCCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGTGCAGGTAGCTCCCCCAAGACCAAGCCCAAGGCGCGTCCGTGTGGAGGCTGGGGCTGACGCACCCCCACCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAGGCCTCATCCCCAAAGGAGGATGCTCCACTGCAGGGGGCGGAGTCTTCTCCAGATGGAGAAAGACTTTTTTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTCTCTGAATTCGTCTTAAATTAGGAAATCATGTGGGAATTGGAAAAGATTGGAAATTCTGACTTGTTTCCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AGGCTCTGAAGAAACAGGAAGAGAAAAGTGAAAATAGAGTTAGCACCCCGCCCACTCATTTCAGTTTCTCCAGT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGCTGGCCCTGATTAGAAAAGTGTTTACTTTTGGCAGGGGGCGGGGGAGGCCGACTTCAGGTGACAGAATGGAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TAATTAAAATCTTTGGTTAATGATATACAATTATCATTGAACCTTGCATGGATCCTCTTCTTAAAATTCATGTA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TATTTATAACTTTTAAATTAATACGATAAACACCCATGTACCCATTGCAAAACTCAAGGGGCCACCACCATCCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GAATTCTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTTATTTATTTATTTATTT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTTGAGACACGGTCTGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAGCCTCTACC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TCCTGGGCTCAAGCAATCCTCCCACTTCAGCCTCTTGCATAGCTGGGACTACGGGAGCACACCACCATGCCCGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTAAGTTTTTGTATTTTTTGTAAAGAAGTGGTTTAACCTTGTTGTCCAGGCTAGTCTTGAACTCCTGAGCTCAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTTTCCTCCCCGCTTGGCCTCACAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCTGGGCCAGAATTCTGTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTTTTTAAATTAATTAATTAATTAATTTATTGTAAATAGAGATGGGTCTCACTGTGTTGCCCAGGCTGGTCTCA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AACTCCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGTGGGATTACAGGCATGAGCCACCACACCTGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CCCAGAATTCTGTATTTTAAAGAAAAAAAAAGTTATATCTGCATGCCTACACAATATATCTTTTGGTTTTCCTT  1628

Query    1  ----------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGC  40
                                              |   |||||||.||||||||.|||.|||||.||.||||||
Sbjct 1629  AGTTTTGAACTTTTTTTTTTTTTTTTTTGAGACAA---AGTCTCACTCTGTCGCGCAGGCTGGAATGCAGTGGC  1699

Query   41  ATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTG  113
            ||    ||.|||.||||||||||||||||| |.||| ||||||||||||||||||||.||||||.|||||||||
Sbjct 1700  AT----TCTGCTTACTGCAACCTCTGCCTC-CTAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTG  1768

Query  114  GGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTA--TTTTTAGTAGAGATGGGGTTTCACCATG  185
            ||||||.|||..|...|.||||.||||.|||||   ||||||||  |||||||||||||.||||||||||||||
Sbjct 1769  GGATTAAAGGGGCCAACCACCACGCCCAGCTAA---TTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCATG  1839

Query  186  TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------  219
            ||||||||||||||||||||||||||||||||.|                                        
Sbjct 1840  TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATTCGCCAGCCTCTGCCTCCCAAAGTGCTGAGATTACA  1913

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1914  GGTGTGAGCCACCGCACCCAGCCAGTTTTGAACTTTTATGAAGAGGGCATCATATGATTTGTTGTCCTTTGTTA  1987

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1988  CTTGCTTTTTTCACTCAACCTGTTACTATGATTCATGTTTCACAGTTAATTCACTTTTTCACTGCTGTATACTA  2061

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2062  TTTTGTTGTGTAAATATACCACAGTTTGTTTATTCATCCTGAAGATAGGCATTTTTATTTTTATTTTTTTGAGA  2135

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2136  TGGAGTTCCTCTCTTGTGGCCCAGGCTGGAGTGCAATAGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCAG  2209

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2210  GTTCAAGTGATTCTCCTGCCTTAGCCTCCTGAGTAGCTAGGATTACAGATTTATAGGAGCATTGTGACTGGACC  2283

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2284  AAGGACAAAGAAGTTCCCAACCTCCTCAGACCCTCGCTGCTGCCCAGATGTCTGCCATGGGGTGGCCATCATCG  2357

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2358  AATCCACTGAGGGCGCAAATAGAACAAAAAGGTGAAGAAAAGGTGAATTCTCTCCTTTCTTGAGCTGGGACATC  2431

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2432  CAACTTCTCAGACATCAGAGCTCCTGGAGGCCTTCAGACTCCGAGACATTACACCATTGGCTCACCTGGTCCTC  2505

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2506  AGGTCTTTGGACTTGGAATGAATTACACCATTGGCTTTCCAGGTCTTCCAGCTTGCAGATGGCAGATTGTGGGA  2579

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2580  CTTTTCAGCCTCCATAACTTTGTCATCCAATTCCCATAATAAATCGCCTCTTATATCTGTATCTGTTTGGTTCT  2653

Query  220  ------  219
                  
Sbjct 2654  GTTCTG  2659

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