Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12786
Subject:
NM_001368301.1
Aligned Length:
1500
Identities:
298
Gaps:
1182

Alignment

Query    1  ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCCAGGTAGCAGTGTCCACCCTGCCTGTTGAAGAAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATT  74

Query   75  CCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCAAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGT  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCTCGTGTCTGCCCTCGAATCCATGTGTAAAGAACTGGCCAAGTCCAAGGCAGAAGTGGCCTGCATCGCAGTGT  148

Query  149  ACGAAACAGACGTGTTTGTCGTCGGAACCGAGAGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACGAAACAGACGTGTTTGTCGTCGGAACCGAGAGAGGATGCGCTTTTGTTAATGCCAGGACGGATTTTCAGAAA  222

Query  223  GATTTTGCAAAATACTGCGTTGCAGAGGGACTGTGTGAGGTGAAACCTCCCTGCCCTGTGAACGGGATGCAGGT  296
            |||||||||||||||||       .|||   |||.|.|..|..|.|||       .|||       ||.|    
Sbjct  223  GATTTTGCAAAATACTG-------TAGG---TGTTTTAATTTTATCCT-------TTGT-------ATTC----  268

Query  297  CCA--CTCGGGCGAAACGGAAATACTCAGGAAGGCAGTGGAGGACTATTTCTGC----TTTTGTTATGGTAAAG  364
            |||  |||     |||           ||||..|||| |.|.|||   |||..|    ||||.||.|    |||
Sbjct  269  CCAATCTC-----AAA-----------AGGATCGCAG-GCAAGAC---TTCCACAGTATTTTCTTCT----AAG  318

Query  365  CCTTAGGGACAACAGTGATGGTGCCTGTTCCCTATGAGAAGATGCTGCGAGACCAGTCGGCTGTGGTAGTGCAG  438
            |..|     ||                                                               
Sbjct  319  CTAT-----CA---------------------------------------------------------------  324

Query  439  GGGCTTCCGGAAGGCGTTGCCTTTCAACACCCTGAGAATTACGACCTTGCAACCCTGAAATGGATTTTGGAGAA  512
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  513  CAAAGCAGGGATTTCATTCATCATAAATAGACCCTTCCTAGGACCAGAGAGTCAGCTGGGTGGCCCTGGGATGG  586
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  587  TAACAGATGCGGAGAGATCCATAGTATCACCAAGTGAAAGCTGCGGCCCCATCAATGTGAAAACTGAACCCATG  660
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  661  GAAGATTCTGGCATTTCACTGAAAGCAGAAGCTGTCTCAGTCAAGAAAGAATCAGAAGATCCTAATTACTATCA  734
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  735  ATATAATATGCAAGGAAGCCACCCTTCTTCCACAAGCAATGAAGTAATAGAAATGGAATTACCAATGGAAGATT  808
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  809  CCACTCCGCTGGTCCCTTCAGAAGAACCAAATGAGGACCCTGAAGCCGAGGTGAAAATCGAAGGAAACACAAAT  882
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  883  TCATCCAGTGTTACAAATTCTGCAGCAGGTGTTGAAGATCTTAACATCGTTCAAGTGACTGTTCCAGATAATGA  956
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query  957  GAAGGAAAGATTATCAAGCATTGAAAAGATTAAACAGCTAAGAGAACAAGTTAATGACCTCTTTAGCCGAAAAT  1030
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1031  TTGGTGAAGCAATTGGCGTGGATTTCCCTGTGAAAGTTCCCTACAGGAAGATCACATTCAACCCTGGCTGTGTG  1104
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1105  GTGATTGATGGCATGCCCCCGGGGGTGGTATTCAAGGCCCCCGGCTATCTGGAAATCAGTTCCATGAGGAGGAT  1178
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1179  CTTGGAGGCAGCTGAGTTTATCAAATTCACAGTCATCAGGCCGCTTCCAGGGCTTGAGCTCAGTAATGGACTTT  1252
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1253  TGGAGGCCGGGGCAGGAGGATTGCTTGAGGCCGGGAGTTTGAGGCCAGCCTGGGCAACATGGCAAGACCCCATC  1326
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1327  TCTACAAAAAATTTAAAAATTAGCTGGAAACAGTGGCTCACACCTGTAGCCCCAGCTACTTGGCAGGCTGAAGC  1400
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1401  GGGAGGATCGCTTGAACTCAGGAGTTTGAGACAGCAGAGAACCATAATTGCAATACTGCACTCCAGCCTGGGTG  1474
                                                                                      
Sbjct  325  --------------------------------------------------------------------------  324

Query 1475  ACAGAACAAGACCCTGTCTC  1494
                                
Sbjct  325  --------------------  324