Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12794
Subject:
NM_001291459.2
Aligned Length:
1647
Identities:
872
Gaps:
774

Alignment

Query    1  ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74

Query   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG  148

Query  149  GGATTGTACATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGATTGTACATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGA  222

Query  223  AAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTA  296

Query  297  CAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACACTGAGGAAATGAAGATGAAAA  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  297  CAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACACTGAGGAAATGAAGTTGAAAA  370

Query  371  ACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGAC  444

Query  445  GTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACAT  518

Query  519  CCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCC  592

Query  593  TCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAG  666

Query  667  GGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCACA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCACA  740

Query  741  ACCCAAGACCATGGGGCATCAG----------------------------------------------------  762
            ||||||||||||||||||||||                                                    
Sbjct  741  ACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATGTGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGA  814

Query  763  --------------------------------------------------------------------------  762
                                                                                      
Sbjct  815  TATTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCCTGTGGGACGTGTATCTGGTAGAAGGCGAACAGGCG  888

Query  763  ----------------------------------------AGCGCCTCACGAAGACGTCCAGGTGTGGCCCGTG  796
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  889  TTGATGCCGATAACAAGAATCGCCTTTAAGGTTCAGCAGAAGCGCCTCACGAAGACGTCCAGGTGTGGCCCGTG  962

Query  797  GGCACGTTTTTGCAACCGGTTCGTTGATACCTGGGCCAGGGATGAGGACACTGTGCTCAAGCATCTTAGGGCCT  870
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCACGTTTTTGCAACCGGTTCGTTGATACCTGGGCCAGGGATGAGGACACTGTGCTCAAGCATCTTAGGGCCT  1036

Query  871  CTA-----------------------------------------------------------------------  873
            |||                                                                       
Sbjct 1037  CTATGAAGAAACTAACAAGAAAGCAGGGGGACCTGCAACCCCCAGCCAAACCCGAGCAAGGGTCGTCGGCATCC  1110

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1111  AGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCAAGGGGGACAGGCAGGCCCCTCCAGGCCCACCAGC  1184

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1185  CCGGTTCCCGCGGCCCATTTGGTCAGCTTCCCCGCCACGGGCACCTCGTTCTTCCACACCCTGTCCTGGTGGGG  1258

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1259  CTGTCCGGGAAGACACCTACCCTGTGGGCACTCAGGGTGTGCCCAGCCCGGCCCTGGCTCAGGGAGGACCTCAG  1332

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1333  GGTTCCTGGAGATTCCTGCAGTGGAACTCCATGCCCCGCCTCCCAACGGACCTGGACGTAGAGGGCCCTTGGTT  1406

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1407  CCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTGCCATATCCCAGGAGGACCAGCTGGCCCCCTGCTGGC  1480

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1481  AGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTCGCTGCACCCAGCACTGATTCCGACCAGGGCACCCCC  1554

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1555  TTCAGAGCTAGGGACGAACAGCCGTGTGCTCCCACCTCAGGGCCTTGCCTCTGCGGCCTCCACTTGGAAAGTTC  1628

Query  874  -------------------  873
                               
Sbjct 1629  TCAGTTCCCTCCAGGCTTC  1647