Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12833
• Subject: NM_032528.3
• Aligned Length: 1600
• Identities: 1344
• Gaps: 248

Alignment

Query    1  ---------------------------------ATGCTTTTCGGAATATTCGCTTGGGGGCTCCTCTTTTTGCT  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAATATTCGCTTGGGGGCTCCTCTTTTTGCT  74

Query   42  GATTTTCATCTACTTCACCGACAGCAACCCCGCTGAGCCTGTACCCAGCTCCCTCTCCTTCCTGGAGACCAGGA  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GATTTTCATCTACTTCACCGACAGCAACCCCGCTGAGCCTGTACCCAGCTCCCTCTCCTTCCTGGAGACCAGGA  148

Query  116  GGCTCCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATGAGCCCTCCCCGCCTGGGGGCCTG  189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGCTCCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATGAGCCCTCCCCGCCTGGGGGCCTG  222

Query  190  GACGCACGCCAGGCGCTGCCCCGCGCCCACCCAGCCGGTTCCTTTCATGCGGGGCCTGGAGACCTGCAGAAATG  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACGCACGCCAGGCGCTGCCCCGCGCCCACCCAGCCGGTTCCTTTCATGCGGGGCCTGGAGACCTGCAGAAATG  296

Query  264  GGCCCAGTCCCAAGATGGGTTTGAACATAAAGAGTTTTTTTCATCCCAGGTGGGGAGAAAATCTCAAAGTGCTT  337
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCCCAGTCCCAAGATGGGTTTGAACATAAAGAGTTTTTTTCATCCCAGGTGGGGAGAAAATCTCAAAGTGCTT  370

Query  338  TCTACCCGGAGGATGACGACTACTTTTTTGCTGCTGGTCAGCCAGGGTGGCACAGCCACACTCAGGGGACATTG  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCTACCCGGAGGATGACGACTACTTTTTTGCTGCTGGTCAGCCAGGGTGGCACAGCCACACTCAGGGGACATTG  444

Query  412  GGATTCCCTTCCCCCGGGGAGCCAGGCCCACGGGAGGGGGCTTTTCCGGCTGCACAGGTCCAGAGGAGGCGGGT  485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGATTCCCTTCCCCCGGGGAGCCAGGCCCACGGGAGGGGGCTTTTCCGGCTGCACAGGTCCAGAGGAGGCGGGT  518

Query  486  GAAGAAGAGGCACCGGAGGCAGAGAAGGAGCCACGTGTTGGAGGAGGGCGACGACGGCGACAGGCTGTACTCCT  559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAAGAAGAGGCACCGGAGGCAGAGAAGGAGCCACGTGTTGGAGGAGGGCGACGACGGCGACAGGCTGTACTCCT  592

Query  560  CCATGTCCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCGCCTGCAG  633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCATGTCCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCGCCTGCAG  666

Query  634  AAGGCGATGAAGGATTACCTGACCGCCAACAAGCACGGGGTGCGCTTCCGCGGGAAGCGGGAGGCCGGGCTGAG  707
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGGCGATGAAGGATTACCTGACCGCCAACAAGCACGGGGTGCGCTTCCGCGGGAAGCGGGAGGCCGGGCTGAG  740

Query  708  CAGGGCACAGCTGCTGTGCCAGCTGCGGAGCCGCGCGCGCGTGCGGACGCTGGACGGCACCGAGGCGCCCTTTT  781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CAGGGCACAGCTGCTGTGCCAGCTGCGGAGCCGCGCGCGCGTGCGGACGCTGGACGGCACCGAGGCGCCCTTTT  814

Query  782  CTGCGCTGGGCTGGCGGCGCCTGGTGCCCGCCGTGCCCCTGAGCCAGCTGCACCCCCGCGGCCTGCGCAGCTGC  855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CTGCGCTGGGCTGGCGGCGCCTGGTGCCCGCCGTGCCCCTGAGCCAGCTGCACCCCCGCGGCCTGCGCAGCTGC  888

Query  856  GCTGTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGAGGAAATAGATTCTCATGATGCGGTTTT  929
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GCTGTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGAGGAAATAGATTCTCATGATGCGGTTTT  962

Query  930  GAGATTTAACTCTGCTCCTACACGTGGTTATGAGAAAGATGTTGGGAATAAAACCACCATACGCATCATTAATT  1003
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGATTTAACTCTGCTCCTACACGTGGTTATGAGAAAGATGTTGGGAATAAAACCACCATACGCATCATTAATT  1036

Query 1004  CGCAGATTCTGACCAACCCCAGCCATCACTTCATTGACAGTTCACTGTATAAAGACGTCATTTTGGTGGCCTGG  1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CGCAGATTCTGACCAACCCCAGCCATCACTTCATTGACAGTTCACTGTATAAAGACGTCATTTTGGTGGCCTGG  1110

Query 1078  GACCCTGCCCCATATTCCGCAAATCTTAACCTGTGGTACAAAAAACCGGATTACAACCTGTTCACTCCATATAT  1151
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GACCCTGCCCCATATTCCGCAAATCTTAACCTGTGGTACAAAAAACCGGATTACAACCTGTTCACTCCATATAT  1184

Query 1152  TCAGCATCGTCAGAGAAACCCAAATCAGCCATTTTACATTCTTCATCCTAAATTTATATGGCAGCTCTGGGATA  1225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCAGCATCGTCAGAGAAACCCAAATCAGCCATTTTACATTCTTCATCCTAAATTTATATGGCAGCTCTGGGATA  1258

Query 1226  TTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGG----CTCATTTGT  1295
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||    
Sbjct 1259  TTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCAT----  1328

Query 1296  AAAAAT--TGGCCATAT-CAGAG-CTTGCA-GTG--------------AGCCG------AGATCACGCGA-CTG  1343
               |||  ||.||||.| ||||| ..|||| |||              |.|||      ||   ||| || |||
Sbjct 1329  ---AATGATGTCCATGTGCAGAGAGGTGCACGTGTATGAATATATCCCATCCGTGCGGCAG---ACG-GAGCTG  1395

Query 1344  ---CACT----CCAGC----CTGGACGACAGAG-----------------------------------------  1365
               ||||    |.|||    ||  |||||..||                                         
Sbjct 1396  TGCCACTACCACGAGCTGTACT--ACGACGCAGCCTGCACCCTCGGGGCGTACCACCCACTACTCTATGAGAAG  1467

Query 1366  --------------------------------------------------------------------------  1365
                                                                                      
Sbjct 1468  CTCCTGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTT  1541

Query 1366  ----------------------------------------------  1365
                                                          
Sbjct 1542  CCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCT  1587