Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12859
- Subject:
- NR_152603.1
- Aligned Length:
- 2982
- Identities:
- 905
- Gaps:
- 1969
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCGGCGACCGGAGGCGCGCGGACAGGCAAGGAGACCGCGGCCGGGGTCGTGTCAGGAATCCGCCTGACCTAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATTGCTAGCCTTGTTTGCTTGTCCCTCTGAGGACTCCCTGCTTGCTTGCTTTTTTTTCCTTAAGGGGAAGGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGTAAGGAAGGAATGGCCAGTGTACTGACTGGACGCCAACTGGGACATTTCTGACGTGGGGAGCACAGTAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATTCTATTTTAATTCCGTCGCGGCTTTAGGTTGAGTTTGCTTCTGAAAGCTCCCCCTCGCTTAATTGACCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGTTTGGCAGATTTTGGCTGAATTGAAATGTGTTAGTTTGACCTGCTTCAGGTCCTTTCTCTCCACCGTCGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCCCCACCCCCGCTCCTCCTTTCTTTTTTCTTTTTCTTTTTTTCTTTTCTTTTTTTCGAGGAAACGTTCTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCCTGCTCAGGATGGGCGTTTTGAAGACCTGTGTACTTAGAAGAAGTGCTTGTGCCGCCGCCTGCTTCTGGAG 518
Query 1 ----------------------------------------------------------------ATGCCTGCTT 10
|||||.||||
Sbjct 519 AAGGACAGTTATCCCAAAGCCACCATTTAGAGGCATTAGTACTACGTCTGCGAGGAGCACTGTCATGCCCGCTT 592
Query 11 GGGTGATAGATAAATATGGGAAGAATGAAGTGCTTCGATTCACTCAGAACATGATGATGCCTATCATACACTAT 84
|||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||.|.|||||||||||||||
Sbjct 593 GGGTGATAGATAAATATGGAAAGAATGAAGTCCTTCGATTCACCCAGAACATGATGTTACCTATCATACACTAT 666
Query 85 CCAAATGAAGTCATTGTCAAAGTTCACGCTGCCAGTGTAAATCCTATAGACGTTAATATGAGAAGTGGTTATGG 158
|||||||||||||||.|||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 667 CCAAATGAAGTCATTATCAAAGTCCACGCTGCCAGTGTAAATCCTATAGATGTTAATATGAGAAGTGGTTATGG 740
Query 159 AGCTACAGCTTTAAATATGAAGCGTGATCCTTTACACGTGAAAATCAAAGGAGAAGAATTTCCTCTGACTCTGG 232
|||.|||||..|||||||||||||||||||..|.||..||||||.||||||||||||.||||||||||||||||
Sbjct 741 AGCCACAGCCCTAAATATGAAGCGTGATCCCCTGCATATGAAAACCAAAGGAGAAGAGTTTCCTCTGACTCTGG 814
Query 233 GTCGGGATGTCTCTGGCGTGGTGATGGAATGTGGGCTTGATGTGAAATACTTCAAGCCTGGAGATGAGGTCTGG 306
||||||||||||||||.|||||||||||.|||||||||||||||||.||.|||.||||||||||||||||||||
Sbjct 815 GTCGGGATGTCTCTGGTGTGGTGATGGAGTGTGGGCTTGATGTGAAGTATTTCCAGCCTGGAGATGAGGTCTGG 888
Query 307 GCTGCAGTTCCTCCTTGGAAACAAGGCACTCTTTCAGAGTTTGTTGTAGTCAGTGGGAATGAGGTCTCTCACAA 380
||||||||||||||||||||.|||||||||||.|||||.||||||||.|||||||||||||||||.||.|||||
Sbjct 889 GCTGCAGTTCCTCCTTGGAAGCAAGGCACTCTCTCAGAATTTGTTGTGGTCAGTGGGAATGAGGTTTCACACAA 962
Query 381 ACCCAAATCACTCACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCACAGCCTGGTCTGCTATAAACA 454
.||||||||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||
Sbjct 963 GCCCAAATCGCTTACTCATACTCAAGCTGCCTCTTTGCCATATGTGGCTCTCACGGCCTGGTCTGCCATAAACA 1036
Query 455 AAGTTGGTGGCCTGAATGACAAGAATTGCACAGGAAAACGTGTTCTAATCTTAGGCGCTTCAGGCGGAGTTGGT 528
|.|||||.|||||||.|||||.|||.||||..||.||.|
Sbjct 1037 AGGTTGGCGGCCTGAGTGACAGGAACTGCAAGGGGAAGC----------------------------------- 1075
Query 529 ACTTTTGCTATACAGGTAATGAAAGCATGGGATGCTCATGTGACAGCAGTTTGCTCCCAAGATGCCAGTGAACT 602
|||||||||||||||||..||||||||||||||.||||||||..||||||||||||||||
Sbjct 1076 --------------GGTAATGAAAGCATGGGGGGCTCATGTGACAGCCGTTTGCTCGAAAGATGCCAGTGAACT 1135
Query 603 TGTAAGGAAGCTTGGTGCAGACGATGTAATTGATTACAAATCTGGAAGTGTGGAAGAGCAGTTGAAATCCTTAA 676
|||..||||||||||.|||||.||.||.||||||||||..|..|||||||||||||||||.||||||||..|||
Sbjct 1136 TGTGCGGAAGCTTGGAGCAGATGAGGTCATTGATTACACGTTGGGAAGTGTGGAAGAGCAATTGAAATCTCTAA 1209
Query 677 AACCATTTGATTTTATCCTTGATAATGTTGGCGGATCCACTGAAACATGGGCTCCAGATTTTCTCAAGAAATGG 750
|||..|||||.||||||||||||||.|||||.|||||.||||||||||||||||.|.|||||||||||||.|||
Sbjct 1210 AACTGTTTGACTTTATCCTTGATAACGTTGGTGGATCTACTGAAACATGGGCTCTAAATTTTCTCAAGAAGTGG 1283
Query 751 TCAGGAGCCACCTATGTGACTTTGGTGACTCCTTTCCTCCTGAACATGGACCGATTGGGCATAGCAGATGGCAT 824
||||||||.||||||||||||.||||||||||||||||||||||||||||||||.||||..|.||.||||||||
Sbjct 1284 TCAGGAGCTACCTATGTGACTCTGGTGACTCCTTTCCTCCTGAACATGGACCGACTGGGTGTTGCTGATGGCAT 1357
Query 825 GTTGCAGACAGGAGTCACTGTAGGTTCAAAGGCATTAAAGCATTTCTGGAAAGGAGTCCATTATCGCTGGGCAT 898
||||||||||||||||||.||.|||.||||||||||.||||||.|||||.|||||||||||||..|.|||||.|
Sbjct 1358 GTTGCAGACAGGAGTCACCGTGGGTACAAAGGCATTGAAGCATCTCTGGCAAGGAGTCCATTACAGATGGGCCT 1431
Query 899 TTTTCATGGCCAGTGGCCCATGTTTAGATGACATTGCAGAACTGGTGGATGCGGGAAAGATCCGGCCAGTTATT 972
|.||||||||||||||.||||.|.|||||||.||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1432 TCTTCATGGCCAGTGGTCCATATCTAGATGAAATTGCAGAACTGGTGGATGCAGGAAAGATCCGGCCAGTTATT 1505
Query 973 GAACAAACCTTTCCTTTTTCTAAAGTTCCAGAAGCCTTCCTGAAGGTGGAAAGAGGACACGCACGAGGAAAGAC 1046
||.|..||.||.|||||.|||.||||.|||||||||||||||||||||||.|||||.|||||.|||||||||||
Sbjct 1506 GAGCGGACATTCCCTTTCTCTGAAGTCCCAGAAGCCTTCCTGAAGGTGGAGAGAGGCCACGCCCGAGGAAAGAC 1579
Query 1047 TGTAATTAATGTTGTT---------------------------------------------------------- 1062
|||..|||||||.|||
Sbjct 1580 TGTGGTTAATGTAGTTTAAATACATATATGGGCAAGCTGGCGGCTTGCTGCTCTCTCCTCGCCAAGTGCCTCGG 1653
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1654 ACCCAGACATCTAGCCTTCACCACACATTCTCCCGAGTCAGATTTTAAGTTTCACTATCCATGTATAAACCTAC 1727
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1728 TCCTGGACTGGTGAGAGCTCACAGGTAAAGTTGCGTGGCTGCCTGAGTTCAGTTCCTGGAGCCCACTCGAGGGA 1801
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1802 GAACTGATTCCAGTACATTGTTCTCTCTCCCCCTCCCCCACTATGCACACACCTCTACAGAGATAAAGAAATGC 1875
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1876 ATAATGCTTGTGTGGGCACATGCGCCAAGGGCACGAGAGGACATCACAGGGAACCTTCGGGAGCCAGTGCTAGC 1949
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 1950 CTTTACCCACGGAGTCATCTCACTGGCCCAATGAAAAACATTTTTAAAAATATGTGTTTTAAAAAATACTTTCA 2023
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2024 AAATTATTTAAATTGACCTAGAGAATAGTTTCTTCATGGCAGTCTACATGTACGTTCATGGGATGTAGCCTTTT 2097
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2098 GTGCTAATCATTTGCCAATGCTCAGTACAAAACTGTCAGCTCCTGCACTTGCCTGCAGTCAGTGGGAAGTACAT 2171
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2172 GGTGCTTTGTTTTAATTTATTTTGATTTTGTGTCATGTGTATGGATATTTGCCTATGTGTATGTGCACCATATG 2245
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2246 GCATGTCTTGTACCTGGGGCGCCCAGAGGTGGTTGTCAGGTCCCTTGGAACTGGAATTAACAGGTGATTGTGAG 2319
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2320 CTGCCATGTAGGCACTGGGAATTGAACCTGGGTCCTCAGGAAGAGCAGCCAGTGTTCCTAAATGCGGAGCTGTC 2393
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2394 TCCAGCCTCTGCACAGTGTTTTTGTTTTCATAAGCTGTGGTTTGACCCAGCTCTGTAAATTTTTGTGGCCTTTT 2467
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2468 TGTAGCTCAAACCCCGCCATCTTATGTTAATGTCTGTGAGATTCTAAAACGGGTCAGAACCTCTCCCAAGGACC 2541
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2542 TTCGTGTGCAGCATCACTTGTGATAATACTGGGAGGTAGCAGAACCTTACGTAGGACCTAGTGGGAGGAAGTGG 2615
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2616 GGAGGCACTGCTGGAGGAGATACCAGGACCCAGGGCTTTCCTGCTTCTATGTCTTGATCGCCTGTAGGCAGGCC 2689
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2690 TGAGGAGCATTCTCTTGATTGATGGTTGGTGGATGGGTCCAGCCCACTGTGGGAGGTGCCATCCCTGGGTAGGT 2763
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2764 AGTCATGGGGTGTATAAGAAACCAAACTCAGTAAGCTAAGGGGAAGCAAGCCAGTCAGCAGCACTCCTCTGTGG 2837
Query 1063 -------------------------------------------------------------------------- 1062
Sbjct 2838 CCTCTGCATTAGTTCCTGCCTCCGGGTTCCTGCATTCCTTGAGTCCCTGCCCTCTATGATGTAATCTGTGAGAT 2911
Query 1063 ---------------------- 1062
Sbjct 2912 GTAATAAACCCTTTCCTCCTCA 2933
