Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12925
- Subject:
- XM_005253519.2
- Aligned Length:
- 1947
- Identities:
- 1245
- Gaps:
- 702
Alignment
Query 1 ATGGAAATGAGATGGTTTTTGTCAAAGATTCAGGATGACTTCAGAGGTGGAAAAATTAACCTAGAAAAAACTCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAATGAGATGGTTTTTGTCAAAGATTCAGGATGACTTCAGAGGTGGAAAAATTAACCTAGAAAAAACTCA 74
Query 75 GAGGTTACTTGAAAAATTAGATATTCGGTGCAGTTATATTCATGTGAAACAGATTTTTAA-------------- 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAGGTTACTTGAAAAATTAGATATTCGGTGCAGTTATATTCATGTGAAACAGATTTTTAAGGACAATGACAGGC 148
Query 135 -------------------------------------------------------------------------- 134
Sbjct 149 TGAAACAAGGAAGAATCACCATAGAAGAATTTAGAGCAATTTATCGAATTATCACGCACAGAGAAGAAATTATT 222
Query 135 -------------------------------------------------------------------------- 134
Sbjct 223 GAGATTTTCAACACATATTCTGAAAACCGGAAAATTCTTTTAGCAAGTAATCTGGCTCAATTTCTGACACAAGA 296
Query 135 -------------------------------------------------------------------------- 134
Sbjct 297 ACAATATGCAGCTGAGATGAGTAAAGCTATTGCTTTTGAGATCATTCAGAAATACGAGCCTATCGAAGAAGTTA 370
Query 135 -------------------------------------------------------------------------- 134
Sbjct 371 GGAAAGCACACCAAATGTCATTAGAAGGTTTTACAAGATACATGGATTCACGTGAATGTCTACTGTTTAAAAAT 444
Query 135 -------------------------------------------------------------------------- 134
Sbjct 445 GAATGTAGAAAAGTTTATCAAGATATGACTCATCCATTAAATGATTATTTTATTTCATCTTCACATAACACATA 518
Query 135 -------------------------------------------------------------------------- 134
Sbjct 519 TTTGGTATCTGATCAATTATTGGGACCAAGTGACCTTTGGGGATATGTAAGTGCCCTTGTGAAAGGATGCCGTT 592
Query 135 -------------------------------------------------------------------------- 134
Sbjct 593 GTTTGGAGATTGACTGCTGGGATGGAGCACAAAATGAACCTGTTGTATATCATGGCTACACACTCACAAGCAAA 666
Query 135 -----------------------------------------------GACATCTGACTACCCAGTGGTGCTCTC 161
|||||||||||||||||||||||||||
Sbjct 667 CTTCTGTTTAAAACTGTTATCCAAGCTATACACAAGTATGCATTCATGACATCTGACTACCCAGTGGTGCTCTC 740
Query 162 TTTAGAAAATCACTGCTCCACTGCCCAACAAGAAGTAATGGCAGACAATTTGCAGGCTACTTTTGGAGAGTCCT 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTAGAAAATCACTGCTCCACTGCCCAACAAGAAGTAATGGCAGACAATTTGCAGGCTACTTTTGGAGAGTCCT 814
Query 236 TGCTTTCTGATATGCTTGATGATTTTCCTGATACTCTACCATCACCAGAGGCACTAAAATTCAAAATATTAGTT 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCTTTCTGATATGCTTGATGATTTTCCTGATACTCTACCATCACCAGAGGCACTAAAATTCAAAATATTAGTT 888
Query 310 AAAAATAAGAAAATAGGAACCTTAAAGGAAACCCATGAAAGAAAAGGTTCTGATAAGCGT-------------- 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAAAATAAGAAAATAGGAACCTTAAAGGAAACCCATGAAAGAAAAGGTTCTGATAAGCGTGGTAAGGTGGAGGA 962
Query 370 -------------------------------------------------------------------------- 369
Sbjct 963 ATGGGAAGAAGAAGTGGCAGATGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATA 1036
Query 370 -----------------------------------GGAGACAATCAAGACAAGGAAACAGGGGTAAAAAAGTTA 408
|||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATTCAAAGAATCAGAAGTATTGGAATCTGTTTTAGGAGACAATCAAGACAAGGAAACAGGGGTAAAAAAGTTA 1110
Query 409 CCTGGAGTAATGCTTTTCAAGAAAAAGAAGACCAGGAAGCTAAAAATTGCTCTGGCCTTATCTGATCTTGTCAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CCTGGAGTAATGCTTTTCAAGAAAAAGAAGACCAGGAAGCTAAAAATTGCTCTGGCCTTATCTGATCTTGTCAT 1184
Query 483 TTATACGAAAGCTGAGAAATTCAAAAGCTTTCAACATTCAAGATTATATCAGCAATTTAATGAAAATAATTCTA 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTATACGAAAGCTGAGAAATTCAAAAGCTTTCAACATTCAAGATTATATCAGCAATTTAATGAAAATAATTCTA 1258
Query 557 TTGGGGAGACACAAGCCCGAAAACTTTCAAAATTGCGAGTCCATGAGTTTATTTTTCACACCAGGAAGTTCATT 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTGGGGAGACACAAGCCCGAAAACTTTCAAAATTGCGAGTCCATGAGTTTATTTTTCACACCAGGAAGTTCATT 1332
Query 631 ACCAGAATATATCCCAAAGCAACAAGAGCAGACTCTTCTAATTTTAATCCCCAAGAATTTTGGAATATAGGTTG 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ACCAGAATATATCCCAAAGCAACAAGAGCAGACTCTTCTAATTTTAATCCCCAAGAATTTTGGAATATAGGTTG 1406
Query 705 TCAAATGGTGGCTTTAAATTTCCAGACCCCTGGTCTGCCCATGGATCTGCAAAATGGGAAATTTTTGGATAATG 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCAAATGGTGGCTTTAAATTTCCAGACCCCTGGTCTGCCCATGGATCTGCAAAATGGGAAATTTTTGGATAATG 1480
Query 779 GTGGTTCTGGATATATTTTGAAACCACATTTCTTAAGAGAGAGTAAATCATACTTTAACCCAAGTAACATAAAA 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GTGGTTCTGGATATATTTTGAAACCACATTTCTTAAGAGAGAGTAAATCATACTTTAACCCAAGTAACATAAAA 1554
Query 853 GAGGGTATGCCAATTACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCTTACTCATTCATCATCTAA 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGGGTATGCCAATTACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCTTACTCATTCATCATCTAA 1628
Query 927 CAAAGGTGATTCATTAGTAATTATAGAAGTTTTTGGTGTTCCAAATGATCAAATGAAGCAGCAGACTCGTGTAA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAAAGGTGATTCATTAGTAATTATAGAAGTTTTTGGTGTTCCAAATGATCAAATGAAGCAGCAGACTCGTGTAA 1702
Query 1001 TTAAAAAAAATGCTTTTAGTCCAAGATGGAATGAAACATTCACATTTATTATTCATGTCCCAGAATTGGCATTG 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TTAAAAAAAATGCTTTTAGTCCAAGATGGAATGAAACATTCACATTTATTATTCATGTCCCAGAATTGGCATTG 1776
Query 1075 ATACGTTTTGTTGTTGAAGGTCAAGGTTTAATAGCAGGAAATGAATTTCTTGGGCAATATACTTTGCCACTTCT 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATACGTTTTGTTGTTGAAGGTCAAGGTTTAATAGCAGGAAATGAATTTCTTGGGCAATATACTTTGCCACTTCT 1850
Query 1149 ATGCATGAACAAAGGTTATCGTCGTATTCCTCTGTTTTCCAGAATGGGTGAGAGCCTTGAGCCTGCTTCACTGT 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATGCATGAACAAAGGTTATCGTCGTATTCCTCTGTTTTCCAGAATGGGTGAGAGCCTTGAGCCTGCTTCACTGT 1924
Query 1223 TTGTTTATGTTTGGTACGTCAGA 1245
|||||||||||||||||||||||
Sbjct 1925 TTGTTTATGTTTGGTACGTCAGA 1947
