Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12925
- Subject:
- XM_017020178.1
- Aligned Length:
- 1843
- Identities:
- 1213
- Gaps:
- 614
Alignment
Query 1 ATGGAAATGAGATGGTTTTTGTCAAAGATTCAGGATGACTTCAGAGGTGGAAAAATTAACCTAGAAAAAACTCA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAAATGAGATGGTTTTTGTCAAAGATTCAGGATGACTTCAGAGGTGGAAAAATTAACCTAGAAAAAACTCA 74
Query 75 GAGGTTACTTGAAAAATTAGATATTCGGTGCAGTTATATTCATGTGAAACAGATTTTTAA-GACATCTGACTAC 147
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| .|||
Sbjct 75 GAGGTTACTTGAAAAATTAGATATTCGGTGCAGTTATATTCATGTGAAACAGATTTTTAAGGACA-ATGA---- 143
Query 148 CCAGTGGTGCT-------------CTC------------TTTAGA--AA-----------ATCACTGCTCCAC- 182
||| ||| .|| |||||| || ||||| .|||
Sbjct 144 -CAG----GCTGAAACAAGGAAGAATCACCATAGAAGAATTTAGAGCAATTTATCGAATTATCAC----GCACA 208
Query 183 ------------------TGCCCAACA----------------------------AG-AAGTAA--TGGC---- 203
|...||||| || |||||| ||||
Sbjct 209 GAGAAGAAATTATTGAGATTTTCAACACATATTCTGAAAACCGGAAAATTCTTTTAGCAAGTAATCTGGCTCAA 282
Query 204 -----------AG-ACAATTTGCAG--------------GCTA---CTTTTGGAGA------------------ 230
|| |||||.||||| |||| ||||| ||||
Sbjct 283 TTTCTGACACAAGAACAATATGCAGCTGAGATGAGTAAAGCTATTGCTTTT-GAGATCATTCAGAAATACGAGC 355
Query 231 -------------------------------GTCCTT----GCTT----------------------------T 241
|||.|| |.|| |
Sbjct 356 CTATCGAAGAAGTTAGGAAAGCACACCAAATGTCATTAGAAGGTTTTACAAGATACATGGATTCACGTGAATGT 429
Query 242 CT----------------------------------GATATG-CT-----------TGATGATTTT-------- 261
|| |||||| || ||||.|||||
Sbjct 430 CTACTGTTTAAAAATGAATGTAGAAAAGTTTATCAAGATATGACTCATCCATTAAATGATTATTTTATTTCATC 503
Query 262 ----------------------CCTGAT---------------------------------------------- 267
.|||||
Sbjct 504 TTCACATAACACATATTTGGTATCTGATCAATTATTGGGACCAAGTGACCTTTGGGGATATGTAAGTGCCCTTG 577
Query 268 ---------------------------ACT----------------------------------------CTAC 274
||| ||||
Sbjct 578 TGAAAGGATGCCGTTGTTTGGAGATTGACTGCTGGGATGGAGCACAAAATGAACCTGTTGTATATCATGGCTAC 651
Query 275 -CA-TCACCAG--------------------------------------------------AGGCACTAAAATT 296
|| ||||.|| .||||||||||||
Sbjct 652 ACACTCACAAGCAAACTTCTGTTTAAAACTGTTATCCAAGCTATACACAAGTATGCATTCATGGCACTAAAATT 725
Query 297 CAAAATATTAGTTAAAAATAAGAAAATAGGAACCTTAAAGGAAACCCATGAAAGAAAAGGTTCTGATAAGCGT- 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 726 CAAAATATTAGTTAAAAATAAGAAAATAGGAACCTTAAAGGAAACCCATGAAAGAAAAGGTTCTGATAAGCGTG 799
Query 370 -------------------------------------------------------------------------- 369
Sbjct 800 GTAAGGTGGAGGAATGGGAAGAAGAAGTGGCAGATGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG 873
Query 370 ------------------------------------------------GGAGACAATCAAGACAAGGAAACAGG 395
||||||||||||||||||||||||||
Sbjct 874 GAGGAGGAGGATAAATTCAAAGAATCAGAAGTATTGGAATCTGTTTTAGGAGACAATCAAGACAAGGAAACAGG 947
Query 396 GGTAAAAAAGTTACCTGGAGTAATGCTTTTCAAGAAAAAGAAGACCAGGAAGCTAAAAATTGCTCTGGCCTTAT 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 GGTAAAAAAGTTACCTGGAGTAATGCTTTTCAAGAAAAAGAAGACCAGGAAGCTAAAAATTGCTCTGGCCTTAT 1021
Query 470 CTGATCTTGTCATTTATACGAAAGCTGAGAAATTCAAAAGCTTTCAACATTCAAGATTATATCAGCAATTTAAT 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 CTGATCTTGTCATTTATACGAAAGCTGAGAAATTCAAAAGCTTTCAACATTCAAGATTATATCAGCAATTTAAT 1095
Query 544 GAAAATAATTCTATTGGGGAGACACAAGCCCGAAAACTTTCAAAATTGCGAGTCCATGAGTTTATTTTTCACAC 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096 GAAAATAATTCTATTGGGGAGACACAAGCCCGAAAACTTTCAAAATTGCGAGTCCATGAGTTTATTTTTCACAC 1169
Query 618 CAGGAAGTTCATTACCAGAATATATCCCAAAGCAACAAGAGCAGACTCTTCTAATTTTAATCCCCAAGAATTTT 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170 CAGGAAGTTCATTACCAGAATATATCCCAAAGCAACAAGAGCAGACTCTTCTAATTTTAATCCCCAAGAATTTT 1243
Query 692 GGAATATAGGTTGTCAAATGGTGGCTTTAAATTTCCAGACCCCTGGTCTGCCCATGGATCTGCAAAATGGGAAA 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1244 GGAATATAGGTTGTCAAATGGTGGCTTTAAATTTCCAGACCCCTGGTCTGCCCATGGATCTGCAAAATGGGAAA 1317
Query 766 TTTTTGGATAATGGTGGTTCTGGATATATTTTGAAACCACATTTCTTAAGAGAGAGTAAATCATACTTTAACCC 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 TTTTTGGATAATGGTGGTTCTGGATATATTTTGAAACCACATTTCTTAAGAGAGAGTAAATCATACTTTAACCC 1391
Query 840 AAGTAACATAAAAGAGGGTATGCCAATTACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCTTACTC 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 AAGTAACATAAAAGAGGGTATGCCAATTACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCTTACTC 1465
Query 914 ATTCATCATCTAACAAAGGTGATTCATTAGTAATTATAGAAGTTTTTGGTGTTCCAAATGATCAAATGAAGCAG 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 ATTCATCATCTAACAAAGGTGATTCATTAGTAATTATAGAAGTTTTTGGTGTTCCAAATGATCAAATGAAGCAG 1539
Query 988 CAGACTCGTGTAATTAAAAAAAATGCTTTTAGTCCAAGATGGAATGAAACATTCACATTTATTATTCATGTCCC 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1540 CAGACTCGTGTAATTAAAAAAAATGCTTTTAGTCCAAGATGGAATGAAACATTCACATTTATTATTCATGTCCC 1613
Query 1062 AGAATTGGCATTGATACGTTTTGTTGTTGAAGGTCAAGGTTTAATAGCAGGAAATGAATTTCTTGGGCAATATA 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 AGAATTGGCATTGATACGTTTTGTTGTTGAAGGTCAAGGTTTAATAGCAGGAAATGAATTTCTTGGGCAATATA 1687
Query 1136 CTTTGCCACTTCTATGCATGAACAAAGGTTATCGTCGTATTCCTCTGTTTTCCAGAATGGGTGAGAGCCTTGAG 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1688 CTTTGCCACTTCTATGCATGAACAAAGGTTATCGTCGTATTCCTCTGTTTTCCAGAATGGGTGAGAGCCTTGAG 1761
Query 1210 CCTGCTTCACTGTTTGTTTATGTTTGGTACGTCAGA------------------------------- 1245
||||||||||||||||||||||||||.|.| .||||
Sbjct 1762 CCTGCTTCACTGTTTGTTTATGTTTGTTTC-ACAGAGCATCAACCCGGACACAGCCACTCTGTACCA 1827
