Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12944
• Subject: XM_017002775.1
• Aligned Length: 1570
• Identities: 439
• Gaps: 1100

Alignment

Query    1  ATGTTTCCCCATCACTCGAGGAGTCTGGGCAGAGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAACAGACATATTTCTAGTTGTATGAGGTGGCCTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GGCATTTTTCACTAAATTGGAGACCACCCTGTTTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTGACAACCTGAGCCAGACATCTTTGATTCATCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  ATCAAAACGAAGAAAACACCAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAA  370
                     |.|       .||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ---------ATG-------GAAGGTGTGATAAAGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAA  58

Query  371  CGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   59  CGAAGATCCTAGGAGACAAAAATGTTGATCCCAAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATG  132

Query  445  TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  133  TCCTATAATATACTTTCACAAGATTTACTGGAAGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATT  206

Query  519  ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  207  ACACTGGAGTTTTAGGTTTCCCAATATTCTGAAAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAG  280

Query  593  AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGT------------------  648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  281  AAGTTCAAGAAGATCATTATGGAGCAGAGATCAGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAG  354

Query  649  --------------------------------------------ACAATGCAACTTTT-----TT---------  664
                                                        |||.|.|||.||||     ||         
Sbjct  355  ATGCGGACAGGAAGGAAACCTGATGGCTGTGCTATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAA  428

Query  665  ----------TTTTT---------TTTTTCTTTTTT-----GAGACA-----GG----GTCTCACTCTGTC-GC  704
                      ||.||         |.|||||.|.||     ||||||     ||    ||.|.|||||..| ||
Sbjct  429  CCCAGTGGAATTCTTCCGCCCTGATATTTCTCTGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGC  502

Query  705  CCAA---------------CTGGAGTGCA------GTGGCACAAT-------------------CATGGC----  734
            ||||               |||...||||      ||.||| |||                   ||.|||    
Sbjct  503  CCAAAATTCCATATGCTGCCTGCCCTGCAATCTGCGTAGCA-AATACGCATCTGTTGTATAATCCAAGGCGAGG  575

Query  735  ---TCACTACAGC---CTCAA--------CCTACTGGGC-------TCAAGTAATCCTCTC-------ATTTCG  780
               | |.|| |||   |.|||        .||||| |||       ||.|||..|.|.|.|       ||..|.
Sbjct  576  TGAT-ATTA-AGCTGACGCAATTGGCAATGCTACT-GGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCA  646

Query  781  GCTTCC--------------------------------------------------------------------  786
            |||||.                                                                    
Sbjct  647  GCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATTCTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAA  720

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct  721  GGAAAATTGAATTATGAAGGACTTCCCATAGGAAAGGTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAAT  794

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct  795  TTTATCTATTCCAATTTGGCCCCCAAACCTAGGTATCTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAA  868

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct  869  AAGTAGAAAAGACAGACAGTGATCTGACACAAACACAGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAA  942

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct  943  TTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCATCTGTTTATTCACATTACTTTCCTGACACTGGAATTCC  1016

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1017  AGAAGTGACCACCTGTCATTCCCGAAGTGCCATAACTGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATG  1090

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1091  TTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTGGTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACA  1164

Query  787  --------------------------------------------------------------------------  786
                                                                                      
Sbjct 1165  GAACAAGACTTATGGACTGTTAATGGACTTCCAAACGAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAA  1238

Query  787  ----------------  786
                            
Sbjct 1239  GTTCAGACTTGAGCTC  1254