Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12959
- Subject:
- XM_006714936.3
- Aligned Length:
- 1690
- Identities:
- 792
- Gaps:
- 818
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 1 ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG 74
Query 4 GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT 69
| ||||| |||..|.| |||.|| || |||||| .|||| ||..|| ||||..| ||||| |
Sbjct 75 G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T 134
Query 70 ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT 139
|||| ||.| || ||.|||| ||.||||||..|..||||| .||.||||
Sbjct 135 GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT 182
Query 140 ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC--- 189
|||||..| ||....||.| ||||.|| |..|| |.| .|||.||||..||
Sbjct 183 GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG 252
Query 190 AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 245
.||.|| ||.|.|||.|.||.| |.|||||||||||||||||||||||||||||||||
Sbjct 253 GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 326
Query 246 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 400
Query 320 ACCCTGGTCCTCCA---------------------------GGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 366
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 401 ACCCTGGTCCTCCAGGGCAATCAGGACGAGATGGCTACCCGGGACCCCTGGGTTTGGATGGCAAGCCCGGACTT 474
Query 367 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCAGGCCCGAAAGGGGAAAAGGGTGCACCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGC 548
Query 441 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TGGGCCTCCGGGGCCCCCTGGACCTCCTGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGG 622
Query 515 GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 GAGCACAAGGCCCAGCGGGCCCCAAAGGAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGG 696
Query 589 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 CCCAAGGGTGAGCCTGGAGTACCTGGAAAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCC 770
Query 663 CAAGGGCGAGC--------------------------------------------------------------C 674
||||||.|||| |
Sbjct 771 CAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTGCAGGGCCCCGGGGTGCCCCAGGCCTCAAGGGCGAGC 844
Query 675 AGGGAG-------------------------------------------CATGGGGCCTC----------GGGG 695
|||||| ||.|||||||| ||||
Sbjct 845 AGGGAGACACAGTGGTGATCGACTATGATGGCAGGATCTTGGATGCCCTCAAGGGGCCTCCCGGACCACAGGGG 918
Query 696 --------------AGAGAACGGTG----------------TGGA-----CGGTGCCCCAGGA----------- 723
||.||.|..|| |||| |||||||||||||
Sbjct 919 CCCCCAGGGCCACCAGGGATCCCTGGAGCCAAGGGCGAGCTTGGATTGCCCGGTGCCCCAGGAATCGATGGAGA 992
Query 724 --------CCGAAG-----------------GGGGAGCCT-GGCCACC-------------GAGGCACG---GA 755
||.||| ||.|||||| |||||.| ||.|||.| ||
Sbjct 993 GAAGGGCCCCAAAGGACAGAAAGGAGACCCAGGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGA 1066
Query 756 TGGAGCT--GCAGGGCCCCGGGG---TGACGTCC------GGGA----------TCCTGGCCTC-----GGCT- 802
||| ||| .|.||.|.||.||| |||||.|| |||| || |||.|| |.||
Sbjct 1067 TGG-GCTTGTCCGGCCTCCCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTC--GGCGTCTGACAGCCTA 1137
Query 803 ---------CTGTCTC--CTCAT------------GCTCCCAG----------------AGGC----TGGCTTC 833
|||.||| ||||| ||.|||.| |||| |||
Sbjct 1138 CAGGAGAGCCTGGCTCAGCTCATAGTGGAGCCAGGGCCCCCTGGCCCCCCTGGCCCCCCAGGCCCGATGG---- 1207
Query 834 TTCCTCCA---AA-----------AA---------------AAATGGA------------TC-------TGAGC 859
.|||||| || || |||.||| || .|||.
Sbjct 1208 -GCCTCCAGGGAATCCAGGGTCCCAAGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTGCGTCGGGTGAGAGAGG 1280
Query 860 CCCC----GCCTGGCTGTGCAGGGTGCCCCA---GGCCT------------------CAAGGGCGAGCAGGG-A 907
|||| |||||.|||.||..|.||.|||| ||||| |||.||.|||.|||| |
Sbjct 1281 CCCCAGCGGCCTGCCTGGGCCAGTTGGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCA 1354
Query 908 GACACAGTGGTGATC---GACTA--------------------------------------------------- 927
|||.| ||.||.| |||||
Sbjct 1355 GACCC---GGGGAGCCAGGACTAGATGGTTTCCCTGGACCCCGAGGAGAGAAAGGTGATCGGAGCGAGCGTGGA 1425
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1426 GAGAAGGGAGAACGAGGGGTCCCCGGCCGGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGGACCACCAGGCCT 1499
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1500 GGACCAGCCGTGTCCCGTGGAGAATCCCACGTGCGGAGGCCGGAGAGGGGCACCAGGCTGGCGGGGCCCTGCGA 1573
Query 928 -------------------------------------------------------------- 927
Sbjct 1574 GGGGCAATGGGCCATGCCCTGCGGGCCCCGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAG 1635
