Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12959
- Subject:
- XM_011534688.2
- Aligned Length:
- 1736
- Identities:
- 797
- Gaps:
- 874
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 1 ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG 74
Query 4 GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT 69
| ||||| |||..|.| |||.|| || |||||| .|||| ||..|| ||||..| ||||| |
Sbjct 75 G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T 134
Query 70 ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT 139
|||| ||.| || ||.|||| ||.||||||..|..||||| .||.||||
Sbjct 135 GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT 182
Query 140 ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC--- 189
|||||..| ||....||.| ||||.|| |..|| |.| .|||.||||..||
Sbjct 183 GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG 252
Query 190 AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 245
.||.|| ||.|.|||.|.||.| |.|||||||||||||||||||||||||||||||||
Sbjct 253 GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 326
Query 246 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 400
Query 320 ACCCTGGTCCTCCAGGACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCA 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 ACCCTGGTCCTCCAGGACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCA 474
Query 394 CCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC 548
Query 468 TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 549 TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG 622
Query 542 GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA 696
Query 616 AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC 770
Query 690 TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG 844
Query 764 CAGGGCCCCGGGGTGACGTCCGGGATCCT----GGC---------------------CTCGGCTCTG------- 805
|||||||||||||||.| ||.|| ||| ||| .|||.||.||
Sbjct 845 CAGGGCCCCGGGGTGCC--CCAGG--CCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTATGATGGCAG 914
Query 806 --TCT-------CCTCATG----CTCC-------CAGAGGC-----TGGCTTCTTCCTCCAAAAAAAATGGATC 854
||| |||||.| |||| |||.||| .|| ||.|| |.|||||
Sbjct 915 GATCTTGGATGCCCTCAAGGGGCCTCCCGGACCACAGGGGCCCCCAGGG------CCACC-------AGGGATC 975
Query 855 ---TGAGCC-----CCCGCCTGGCTGTGCAGGGTGCCCCAGGCCTC---------AAGGGC-------GAGCAG 904
.||||| |..||.|||.| |||..|||||||||||..|| |||||| || |||
Sbjct 976 CCTGGAGCCAAGGGCGAGCTTGGAT-TGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGGA-CAG 1047
Query 905 ---GGAGACACAGTGGTGATC------------GACTA------------------------------------ 927
||||||.|| ||.||.| ||||.
Sbjct 1048 AAAGGAGACCCA--GGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTC 1119
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1120 CCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTCGGCGTCTGACAGCCTACAGGAGAGCCTGGCTCAGCT 1193
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1194 CATAGTGGAGCCAGGGCCCCCTGGCCCCCCTGGCCCCCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCCCA 1267
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1268 AGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTGCGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGCCAGTT 1341
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1342 GGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTAGATGG 1415
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1416 TTTCCCTGGACCCCGAGGAGAGAAAGGTGATCGGAGCGAGCGTGGAGAGAAGGGAGAACGAGGGGTCCCCGGCC 1489
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1490 GGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGAGAATCCC 1563
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1564 ACGTGCGGAGGCCGGAGAGGGGCACCAGGCTGGCGGGGCCCTGCGAGGGGCAATGGGCCATGCCCTGCGGGCCC 1637
Query 928 ---------------------------------- 927
Sbjct 1638 CGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAG 1671
