Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12959
- Subject:
- XM_011534691.2
- Aligned Length:
- 1736
- Identities:
- 716
- Gaps:
- 955
Alignment
Query 1 -----------------------------------------------------------------------ATG 3
|.|
Sbjct 1 ATGGGCCCAGGCGAGCGCGCCGGTGGCGGCGGCGACGCGGGGAAGGGCAATGCGGCGGGCGGCGGCGGCGGAGG 74
Query 4 GAGTCTCGCTCTGGCATCCA-GGCTGGAGT-----GCGGTG-TCGCGATCTCGGCTCACTGCAAC-CTCCGCCT 69
| ||||| |||..|.| |||.|| || |||||| .|||| ||..|| ||||..| ||||| |
Sbjct 75 G-----CGCTC-GGCGACGACGGCCGG-GTCCCGGGCGGTGAGCGCG--CTGTGC---CTGCTGCTCTCCG--T 134
Query 70 ---CTCGCGTTAAAGCAGTTCT-CCAGCCTCAGTCTCCCAAGCAGCTGGGATTATAGGCGCCTGCCACCACGCT 139
|||| ||.| || ||.|||| ||.||||||..|..||||| .||.||||
Sbjct 135 GGGCTCG-------GCGG--CTGCCTGCCT-----------GCTGCTGGGTGTCCAGGCG------GCCGCGCT 182
Query 140 ----------GTGGCTTC-CTTTTTGAAGTCAGCGAGA-------CCACGAACCC---ACCGGCAGGAACC--- 189
|||||..| ||....||.| ||||.|| |..|| |.| .|||.||||..||
Sbjct 183 GCAGGGCCGGGTGGCGGCGCTCGAGGAGG--AGCGGGAGCTGCTGCGGCG--CGCGGGGCCGCCAGGCGCCCTG 252
Query 190 AACTCC-------AGACACACTTTGACC-----------GTGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 245
.||.|| ||.|.|||.|.||.| |.|||||||||||||||||||||||||||||||||
Sbjct 253 GACGCCTGGGCCGAGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGTTGGACGGACTAGCGAAGATCCGGACTGC 326
Query 246 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 327 TCGGGAAGCTCCATCCGAATGTGTCTGCCCCCCAGGGCCCCCTGGACGGCGCGGCAAGCCTGGGAGAAGAGGCG 400
Query 320 ACCCTGGTCCTCCAGGACCCCTGGGTTTGGATGGCAAGCCCGGACTTCCAGGCCCGAAAGGGGAAAAGGGTGCA 393
||||||||||||||
Sbjct 401 ACCCTGGTCCTCCA------------------------------------------------------------ 414
Query 394 CCAGGAGACTTTGGCCCCCGGGGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC 467
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 ---------------------GGAGACCAAGGACAAGATGGAGCTGCTGGGCCTCCGGGGCCCCCTGGACCTCC 467
Query 468 TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 TGGGGCCCGGGGCCCTCCTGGCGACACTGGGAAAGATGGCCCCAGGGGAGCACAAGGCCCAGCGGGCCCCAAAG 541
Query 542 GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 GAGAGCCCGGACAAGACGGCGAGATGGGCCCAAAGGGACCCCCAGGGCCCAAGGGTGAGCCTGGAGTACCTGGA 615
Query 616 AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 AAGAAGGGCGACGATGGGACACCAAGCCAGCCTGGACCACCAGGGCCCAAGGGCGAGCCAGGGAGCATGGGGCC 689
Query 690 TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 TCGGGGAGAGAACGGTGTGGACGGTGCCCCAGGACCGAAGGGGGAGCCTGGCCACCGAGGCACGGATGGAGCTG 763
Query 764 CAGGGCCCCGGGGTGACGTCCGGGATCCT----GGC---------------------CTCGGCTCTG------- 805
|||||||||||||||.| ||.|| ||| ||| .|||.||.||
Sbjct 764 CAGGGCCCCGGGGTGCC--CCAGG--CCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTATGATGGCAG 833
Query 806 --TCT-------CCTCATG----CTCC-------CAGAGGC-----TGGCTTCTTCCTCCAAAAAAAATGGATC 854
||| |||||.| |||| |||.||| .|| ||.|| |.|||||
Sbjct 834 GATCTTGGATGCCCTCAAGGGGCCTCCCGGACCACAGGGGCCCCCAGGG------CCACC-------AGGGATC 894
Query 855 ---TGAGCC-----CCCGCCTGGCTGTGCAGGGTGCCCCAGGCCTC---------AAGGGC-------GAGCAG 904
.||||| |..||.|||.| |||..|||||||||||..|| |||||| || |||
Sbjct 895 CCTGGAGCCAAGGGCGAGCTTGGAT-TGCCCGGTGCCCCAGGAATCGATGGAGAGAAGGGCCCCAAAGGA-CAG 966
Query 905 ---GGAGACACAGTGGTGATC------------GACTA------------------------------------ 927
||||||.|| ||.||.| ||||.
Sbjct 967 AAAGGAGACCCA--GGAGAGCCTGGGCCAGCAGGACTCAAAGGGGAAGCAGGCGAGATGGGCTTGTCCGGCCTC 1038
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1039 CCGGGCGCTGACGGCCTCAAGGGGGAGAAGGGGGAGTCGGCGTCTGACAGCCTACAGGAGAGCCTGGCTCAGCT 1112
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1113 CATAGTGGAGCCAGGGCCCCCTGGCCCCCCTGGCCCCCCAGGCCCGATGGGCCTCCAGGGAATCCAGGGTCCCA 1186
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1187 AGGGCTTGGATGGAGCAAAGGGAGAGAAGGGTGCGTCGGGTGAGAGAGGCCCCAGCGGCCTGCCTGGGCCAGTT 1260
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1261 GGCCCACCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTAGATGG 1334
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1335 TTTCCCTGGACCCCGAGGAGAGAAAGGTGATCGGAGCGAGCGTGGAGAGAAGGGAGAACGAGGGGTCCCCGGCC 1408
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1409 GGAAAGGAGTGAAGGGCCAGAAGGGCGAGCCGGGACCACCAGGCCTGGACCAGCCGTGTCCCGTGGAGAATCCC 1482
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1483 ACGTGCGGAGGCCGGAGAGGGGCACCAGGCTGGCGGGGCCCTGCGAGGGGCAATGGGCCATGCCCTGCGGGCCC 1556
Query 928 ---------------------------------- 927
Sbjct 1557 CGACGGGCTGCCTGTGCCTGGCTGCTGGCATAAG 1590
