Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13010
Subject:
NM_054089.4
Aligned Length:
2559
Identities:
384
Gaps:
2136

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGTTGCGAGAAGTGGAACCATGTGGCCGAAATGCTGCTCTTCATTGAAGACCGCGAGGAGGAGTACAAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTTTGCCTCTGCTCCCGGGCATTTGTGGAAGATCGAAAATTGTACAATTTGGGATTAAAAGGCTACTATGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAAGCAGTGGCAATAATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCACATAGCCCAAATGAAAGTGACCTTGATTCTGAGGCCAAACTCATGAGAAGTATGGGACTACCAATTCAGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTAGAATGTCTTCACATGAGAATTTTGAGATGTCTATGAATGCAAGAAATAAAGCTAAAGTAAAGCAAAAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GAAGAAAACACCAGAAGCGGTATTTAGATGAAATGGTTCGGGAATCCTGGAGAAATGACTATGAAGAAGATGAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTTGTAGTGTCAGATGACCCATCTTCAGTTGAACACTGTGAGAACAACAGAACATGTGAAATTCAAAGCAAAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGGTTCTGAAGTAGAAAACCTTCCTGTTGAAAATACACTGGCACCAAAGCTAGAGGTCCCAGAGAATTGGGAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGACCAGACACTGTCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCTGAGCCTTGGAACCTCCCTGATACAAAGGAAGAATGGGAACAACATTACAGTCAGCTTTATTGGTATTATTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAACAATTTCAGTATTGGGAAGCTCAGGGCTGGACTTTTACTGCCTCACAAAACTGTGATAAAGATGTTTACA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CATCTCACACAGAAGTAGACCAGAATGCTGAGAGCAGCCTGAAAGCAGATGTAATGACTTTTTCATCTTCACCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AATATAGTTGAGGATGAAATCCCTGGCTCAAATGATAATGACCACAATGAAATTATTACTGCGATTAACAACAT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AACTGTGAGTGCAGAGAAAGTAGAACAGAGCCAGTTAGATTCCTCTCAACACTGTGACGAGCCGCTCAGTGAAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCACTGGGAAAGAGTGCCCTGCCTCTGGAGGAAGTGACTCCTGTAATGGAACACCCAAAGAAAATGATATATCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GAGAACAGAAGCTCAGACCAACCAGCTAAAGAGTTGCAGGAGTCTTCAGGAACAAATAAAGGTAAACATAGACC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCCATGAATTGGATGTTGATGAAAACCCAGATTCAGAAGTTGATGACAATGGTTTCCTTCTAGGATTCAAGCAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GGCTCAGGACAAAAATATGGTGGAATTCCAAATTTCAGCCATCGACAGGTCAGGTATCTAGAGAAGAATGTGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGAGGACT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGGGAAACCTTTTGTCGTGTGTAAGAGTAAAGTACGGAGTAAGGTAGAAAAATTCCTAAAATGGGTTAATGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CGAGTAGATGAGGAGACATCACAGGATTCTCTTTCTCAAAACAAAATGCAAGACACTTGCACAAGCAGTGACTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAACCTGATGGAGACCAGAGATCCAGAACCTGAAAAATGTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAAGAGTGAAGTAGGCTCCTTAGTAGCAACTGTTCCAGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AACTGTTCAACTGAAGAAATACCAAACTCTCCCCATGCAGAAACAGAAGTTGAAATAAAGAAGAAAAAGAAGAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GAACAAGAACAAAAAGATAAATGATCTACCACCTGAAATAGCTTCTGTTCCAGAGCTGGCTAAATACTGGGCCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGAGATACAGGCTCTTCTCTCGCTTTGATGATGGAATCAAATTGGACAAAGAGGGCTGGTTTTCAGTCACTCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GAGAAGATTGCTGAACACATTGCTGGCCGTGTCAGTCAGGCCTTCAGATGTGACGTTGTAGTAGATGCTTTCTG  2072

Query    1  ----------------------------------------ATGAGAGTGATTGCCATTGATATCGATCCTGTTA  34
                                                    |..|||||||||||.|||||||||||.|||||||
Sbjct 2073  TGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGGGAAAAGAGTGATTGCTATTGATATCGACCCTGTTA  2146

Query   35  AGATTGCCCTTGCTCGCAATAATGCAGAAGTTTATGGGATAGCAGATAAGATAGAGTTCATCTGTGGAGATTTC  108
            |.||||..||||||||.||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||
Sbjct 2147  AAATTGATCTTGCTCGGAATAATGCTGAAGTTTATGGGATAGCAGATAAAATAGAGTTTATCTGTGGAGATTTC  2220

Query  109  TTGCTGCTGGCTTCTTTTTTAAAGGCTGATGTTGTGTTCCTCAGCCCACCTTGGGGAGGGCCAGACTATGCCAC  182
            .||||..|||||.|.|.||||||.|||||||||||||||||.||.||||||||||||||||||||.|||||.||
Sbjct 2221  CTGCTCTTGGCTCCATGTTTAAAAGCTGATGTTGTGTTCCTAAGTCCACCTTGGGGAGGGCCAGATTATGCTAC  2294

Query  183  TGCAGAGACCTTTGACATTAGAACAATGATGTCTCCTGATGGCTTTGAAATTTTCAGACTTTCTAAGAAGATCA  256
            ||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||..|||||||||
Sbjct 2295  TGCAGAGACCTTCGACATTAGGACAATGATGTCTCCTGATGGCTTTGAAATTTTCAGGCTTTCCCAGAAGATCA  2368

Query  257  CTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACCAGGTGGCATCCTTAGCTGGGCCTGGAGGG  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||.
Sbjct 2369  CTAATAATATTGTTTATTTTCTTCCAAGAAATGCTGATATTGACCAGGTGGCATCCTTGGCTGGGCTTGGAGGA  2442

Query  331  CAAGTGGAAATAGAACAGAACTTCCTTAACAACAAATTGAAGACAATCACTGCATATTTTGGTGACCTAATTCG  404
            |||||||||||||||||||||||.|||||||||||.||.|||||.|||||||||||.|||||||||||.||..|
Sbjct 2443  CAAGTGGAAATAGAACAGAACTTTCTTAACAACAAGTTAAAGACCATCACTGCATACTTTGGTGACCTGATCAG  2516

Query  405  AAGACCAG--CCTCTGAA-ACC---------------------  423
            ||||||||  |.|||||| |||                     
Sbjct 2517  AAGACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTG  2559

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