Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13019
• Subject: NM_199038.3
• Aligned Length: 1303
• Identities: 925
• Gaps: 269

Alignment

Query    1  ATGGTGGGTTTCGGGGCCAACCGGCGGGCTGGCCGCCTGCCCTCTCTCGTGCTGGTGGTGCTGCTGGTGGTGAT  74
            |||||||||||||||||||||||||||||.|||||||||||.||..||||||||||||||||.|||||.||.||
Sbjct    1  ATGGTGGGTTTCGGGGCCAACCGGCGGGCCGGCCGCCTGCCGTCCTTCGTGCTGGTGGTGCTACTGGTAGTCAT  74

Query   75  CGTCGTCCTCGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTCCTGCTTCAGGAGGAGGTGGCCGAGCTGC  148
            |||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct   75  CGTCGTCCTTGCCTTCAACTACTGGAGCATCTCCTCCCGCCACGTTCTGCTTCAGGAGGAGGTGGCCGAGCTGC  148

Query  149  AGGGCCAGGTCCAGCGCACCGAAGTGGCCCGCGGGCGGCTGGAAAAGCGCAATTCGGACCTCTTGCTGTTGGTG  222
            ||||||||||||||||||||||.||||||||||||||..||||.|||||||||||||||||||||||.||||||
Sbjct  149  AGGGCCAGGTCCAGCGCACCGAGGTGGCCCGCGGGCGCTTGGAGAAGCGCAATTCGGACCTCTTGCTCTTGGTG  222

Query  223  GACACGCACAAGAAACAGATCGACCAGAAGGAGGCCGACTACGGCCGCCTCAGCAGCCGGCTGCAGGCCAGAGA  296
            ||||||||.|||||.|||||||||||||||||||||||.|||||.|||||||||||||||||||||||||..||
Sbjct  223  GACACGCATAAGAAGCAGATCGACCAGAAGGAGGCCGATTACGGTCGCCTCAGCAGCCGGCTGCAGGCCAAGGA  296

Query  297  GGGCCTCGGGAAGAGATGCGAGGATGACAAGGTTAAACTACAGAACAACATATCGTATCAGATGGCAGACATAC  370
            .|||||.|||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||
Sbjct  297  AGGCCTGGGGAAGAGATGCGAGGATGACAAGGTTAAGCTACAAAACAACATATCATATCAGATGGCAGACATAC  370

Query  371  ATCATTTAAAGGAGCAACTTGCTGAGCTTCGTCAGGAATTTCTTCGACAAGAAGACCAGCTTCAGGACTATAGG  444
            |||||||||||||||||||.|||||||||||||||||.|||||||||||.|||||.||||||||.|||||.|||
Sbjct  371  ATCATTTAAAGGAGCAACTGGCTGAGCTTCGTCAGGAGTTTCTTCGACAGGAAGATCAGCTTCAAGACTACAGG  444

Query  445  AAGAACAATACTTACCTTGTGAAGAGGTTAGAATATGAAAGTTTTCAGTGTGGACAGCAGATGAAGGAATTGAG  518
            ||.||.|||||.||||||||.|||.||.|||||||.||.|||||||||||||||||||||||.|||||.||.||
Sbjct  445  AAAAATAATACCTACCTTGTCAAGCGGCTAGAATACGAGAGTTTTCAGTGTGGACAGCAGATCAAGGAGTTAAG  518

Query  519  AGCACAGCATGAAGAAAATATTAAAAAGTTAGCAGACCAGTTTTTAGAGGAACAAAAGCAAGAGACCCAAAAGA  592
            ||||||.||||||||||||||||||||.||||||||.||||||||..|||||||||||   |||||.||.||||
Sbjct  519  AGCACAACATGAAGAAAATATTAAAAAATTAGCAGATCAGTTTTTGCAGGAACAAAAG---GAGACTCATAAGA  589

Query  593  TTCAATCAAATGATGGAAAGGAATTGGATATAAACAATCAAGTAGTACCTAAAAATATTCCAAAAGTAGCTGAG  666
            |||||||||||||||||||.|||||||.||.||||.||||.|.||.||||||||||||||||||.||..||||.
Sbjct  590  TTCAATCAAATGATGGAAAAGAATTGGGTAGAAACGATCATGGAGCACCTAAAAATATTCCAAATGTGCCTGAA  663

Query  667  AATGTTGCAGATAAGAATGAAGAACCCTCAAGCAATCATATTCCACATGGGAAAGAACAAATCAAAAGAGGTGG  740
            ||||.||||.|||||||||||||.|||||||||||||||.||||.|||||||||||||||.|||||.|||.|||
Sbjct  664  AATGATGCAAATAAGAATGAAGACCCCTCAAGCAATCATCTTCCCCATGGGAAAGAACAACTCAAACGAGTTGG  737

Query  741  TGATGCAGGGATGCCTGGAATAGAAGAGAATGACCTAGCAAAAGTTGATGATCTTCCCCCTGCTTTAAGGAAGC  814
            |||||||||||||||||||.|||||||||||||||||||||||||.||.||.|||   ||||||          
Sbjct  738  TGATGCAGGGATGCCTGGAGTAGAAGAGAATGACCTAGCAAAAGTAGACGAGCTT---CCTGCT----------  798

Query  815  CTCCTATTTCAGTTTCTCAACATGAAAGTCATCAAGCAATCTCCCATCTTCCAACTGGACAACCTCTCTCCCCA  888
                                                                                      
Sbjct  799  --------------------------------------------------------------------------  798

Query  889  AATATGCCTCCAGATTCACACATAAACCACAATGGAAACCCCGGTACTTCAAAACAGAATCCTTCCAGTCCTCT  962
                        |.||||||..|||||||.||||.|||.|||.||||||||||||||||.|||||.|.||||||
Sbjct  799  ------------GGTTCACATCTAAACCAGAATGAAAATCCCAGTACTTCAAAACAGAACCCTTCAAATCCTCT  860

Query  963  TCAGCGTTTAATTCCAGGCTCAAACTTGGACAGTGAACCCAGAATTCAAACAGATATACTAAAGCAGGCTACCA  1036
            |||||...|||||||||||.||||||||||..|.||||||||||||||||||||.|...||||||||||.||||
Sbjct  861  TCAGCACATAATTCCAGGCCCAAACTTGGATCGGGAACCCAGAATTCAAACAGACACGTTAAAGCAGGCCACCA  934

Query 1037  AGGACAGAGTCAGTGATTTCCATAAATTGAAGCAAAGCCGATTCTTTGATGAA-AATGAATCCCCTGTTGATCC  1109
            .||||||||.||.|||||||||.||.||||||||||         .||||||| ||.||          ||.|.
Sbjct  935  GGGACAGAGCCAATGATTTCCACAAGTTGAAGCAAA---------ATGATGAAGAACGA----------GAGCT  989

Query 1110  GCAGCATGGCTCTAAACTGGCGGATTATAATGGGGATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGG  1183
            .||| ||||.||    || ||.||.|||                                ||||.|| |||   
Sbjct  990  TCAG-ATGGATC----CT-GCAGACTAT--------------------------------GGCAAAC-AGC---  1021

Query 1184  CTGAGCTGGCTTACAATGAGGAAGAAGATGGTGATG---GTGGAGAGGAAGACGTCCAAGGTGAGCGTGGGCCT  1254
                    |||| ||               ||||||   .|                                 
Sbjct 1022  --------GCTT-CA---------------GTGATGTCCTT---------------------------------  1038

Query 1255  GGCCTCCATGCTATAACCATGAAACCCACCTCTAAGTTTTTTGGT  1299
                                                         
Sbjct 1039  ---------------------------------------------  1038