Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13037
- Subject:
- NM_001323262.1
- Aligned Length:
- 1572
- Identities:
- 732
- Gaps:
- 831
Alignment
Query 1 ATGCCGTCTGAACGCTGCCTCAGTATTCAAGAAATGCTGACAGGCCAGAGGCTCTGCCACTCCGAATCTCACAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TGACAGTGTCCTGGCAGCGCTGAATCAGCAGAGGAGTGATGGCATCCTCTGCGACATCACCCTGATTGCTGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AACAGAAATTCCATGCTCACAAGGCAGTCCTAGCAGCATGCAGTGACTATTTCCGGGCAATGTTCAGTCTTTGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 ATGGTGGAAAGTGGAGCTGATGAGGTTAATTTGCACGGTGTGACCAGCCTTGGCTTAAAGCAGGCTCTGGAGTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGCATACACAGGACAGATTTTGCTGGAGCCAGGTGTGATCCAGGATGTGCTAGCAGCGGGCAGTCACCTACAGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGTTGGAGCTTCTCAATTTATGCTCCCACTATCTCATCCAGGAATTAAATAGCTTTAATTACTTGGATCTGTAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 AGACTTGCTGACCTCTTTAACCTCACTTTGTTGGAGAAGGCAGTGATCGATTTCTTAGTGAAACATCTCTCTGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTCCTGAAGAGCCGCCCAGAAGAAGTTCTAACGCTTCCCTATTGCCTGCTTCAGGAGGTGCTGAAGAGCGACC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GCCTGACCTCCCTGAGTGAAGAGCAGATCTGGCAGCTAGCTGTGAGGTGGTTGGAACACAACTGCCACTACCAG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TACATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTC 740
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ---ATGGACGAGCTCCTGCAATACATCCGCTTTGGCCTAATGGATGTGGATACTCTCCATACAGTTGCCCTGTC 71
Query 741 CCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 CCACCCCCTTGTCCAAGCAAGTGAGACTGCAACAGCCCTTGTCAACGAGGCCCTGGAATACCACCAGAGCATCT 145
Query 815 ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 146 ATGCACAGCCTGTCTGGCAGACTCGCAGGACCAAACCACGATTCCAGTCAGACACTCTGTATATCATTGGTGGG 219
Query 889 AAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 AAAAAGCGCGAGGTCTGCAAGGTCAAGGAACTTCGGTACTTCAATCCTGTTGATCAGGAGAATGCTCTCATAGC 293
Query 963 TGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 TGCCATTGCCAACTGGAGTGAGCTGGCTCCCATGCCTGTGGGAAGGAGCCACCATTGTGTGGCAGTCATGGGGG 367
Query 1037 ACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 ACTTCCTGTTTGTGGCAGGAGGGGAAGTTGAGCATGCCAGTGGCCGGACGTGTGCTGTGAGGACTGCCTGTCGC 441
Query 1111 TATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGC 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 TATGACCCCCGCAGTAATTCCTGGGCAGAGATAGCACCCATGAAAAACTGCCGGGAGCATTTTGTGCTGGGTGC 515
Query 1185 CATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGATATT 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 516 CATGGAGGAATACCTCTATGCAGTTGGGGGCAGAAATGAACTGCGCCAGGTTCTGCCTACAGTTGAGCGATATT 589
Query 1259 GCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTGGCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 GCCCCAAGAAGAACAAATGGACTTTTGTTCAGTCCTTTGACAGATCCCTTTCATGCCATGCTGGATATGTGGCT 663
Query 1333 GATGGTCTTCTTTGGATATCAGGT-------------------------AGAACA---------------TACC 1366
|||||||||||||||||||||||| |||||| .|||
Sbjct 664 GATGGTCTTCTTTGGATATCAGGTGGAGTAACTAATACGGCACAATATCAGAACAGGCTAATGGTGTATGAACC 737
Query 1367 T---CATGT--TGGATTTA----------TCAAA---------------------ACACAC---TTTCATT--- 1398
| ||.|| |||||.|| .|||| ||||.| |||..||
Sbjct 738 TAACCAGGTACTGGATGTAAGCAGAGAAGGCAAAGAAGAAGTATTCTATGGGCCTACACTCCCTTTTGCTTCCA 811
Query 1399 GTGGTAT------------------------ATATT-------------------------------------- 1410
.|||.|| |||||
Sbjct 812 ATGGAATAGCAGCATGCTTCCTTCCAGCTCCATATTTTACATGCCCTAACCTTCAAACTCTTCAAGTGCCTCAT 885
Query 1411 ------------------ 1410
Sbjct 886 CACAGGATTGGCACCATC 903
