Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13049
Subject:
NR_046223.2
Aligned Length:
2584
Identities:
1420
Gaps:
1162

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTCAGCTCTCCGCTCCGCTGGGACCCGCACAGCGCCAGTGGCTCGGGGGTCGGCCCTCGCCTCCTCCCCGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGCCTAGAGCCACCCCTAACCAGAGGCCGGAGACAGCTGGAGCGGCTGCCGCATCCCGGCCCAGCCTCCCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACCATCCCTCCCCCTTCCACTGGACATCTGGACCCTAGGCCCCCGCACCGACAGGGTTCCGGAAACCCTCCCCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCAGCCCGGCGGCCGGGCCCCGCGCCTCTCTCTCTCTAGAGCCCCCAGCCCTCCTCAAGACTAGACTTCCGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TACCCCTGGACACCTCCTCCCGGTCCCCTCCCTCCCCCCCTCCCACAGCCTGGACCGGGGTAGGAGGGAGGGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGTGTGCGCCCGGCGCCGTCCCCGCCCCGCCCCCCGTGATTCCCCCTGCATGGCCGGCCCGGGTGGGGGGCGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGGGGCCCGGGCGCCATGCGGGGGGGGCACAAAGGGGGTCGCTGTGCCTGTCCCCGTGTGATCCGAAAAGTGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGCAAAATGCGGCTGCTGCTTCGCCCGGGGGGGACGTGGGGTGCCCTGGTGAAATTTTCTATCCTGGCCAACT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAAATGAGGATGGCAAGAGAGTGAGCCCTTGGAGAGAGAGGCTGAGCATCATGAAGAGAAGACCCTGGGAGTTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCTGGGGACCCTGAGTCTGGAGCTGGGGCAAGGCCCCCCAGGGCCCGTCAGTGGCCTGAGGAGATGGTTGGATC  740

Query    1  --------------------------------------------------------------------ATGTTG  6
                                                                                ||||||
Sbjct  741  ATTCCAAACATTGTCTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCAGGACCATATGAGAACTGGATGTTG  814

Query    7  GAGCCAGCTCTAGCCACAGGAGAGGAGCTGCCGGAACTGACCTTGCTGACCACACTGTTGGAGGGCCCTGGAGA  80
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAGCCAGCTCTAGCCACAGGAGAGGAGCTGCCGGAACTGACCTTGCTGACCACACTGTTGGAGGGCCCTGGAGA  888

Query   81  TAAGACGCAGCCACCTGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAGGAGGAACAGAAGAAGAAGGCTC  154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TAAGACGCAGCCACCTGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAGGAGGAACAGAAGAAGAAGGCTC  962

Query  155  TGGAAAGGAGTATGTATGTCCTGAGTGAACTGGTAGAAACAGAGAAAATGTACGTGGACGACTTGGGGCAGATT  228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGGAAAGGAGTATGTATGTCCTGAGTGAACTGGTAGAAACAGAGAAAATGTACGTGGACGACTTGGGGCAGATT  1036

Query  229  GTGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAGTCTTCGAGGCCGTGACAGGATTGTGTT  302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GTGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAGTCTTCGAGGCCGTGACAGGATTGTGTT  1110

Query  303  TGGGAATATCCAGCAAATCTATGAGTGGCACCGAGACTATTTCTTGCAAGAGCTACAACGGTGTCTGAAAGATC  376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGGGAATATCCAGCAAATCTATGAGTGGCACCGAGACTATTTCTTGCAAGAGCTACAACGGTGTCTGAAAGATC  1184

Query  377  CTGATTGGCTGGCTCAGCTATTCATCAAACACGAGCGCCGGCTGCATATGTATGTGGTGTACTGTCAGAATAAG  450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTGATTGGCTGGCTCAGCTATTCATCAAACACGAGCGCCGGCTGCATATGTATGTGGTGTACTGTCAGAATAAG  1258

Query  451  CCCAAGTCAGAGCATGTGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCG  524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCCAAGTCAGAGCATGTGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCG  1332

Query  525  CCTGCAGCTGAACGACCTCCTCATCAAACCTGTGCAGCGGATCATGAAATACCAGCTGCTGCTCAAGGATTTTC  598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCTGCAGCTGAACGACCTCCTCATCAAACCTGTGCAGCGGATCATGAAATACCAGCTGCTGCTCAAGGATTTTC  1406

Query  599  TCAAGTATTACAATAGAGCTGGGATGGATACTGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCC  672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TCAAGTATTACAATAGAGCTGGGATGGATACTGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCC  1480

Query  673  AAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGGGGAAGCT  746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGGGGAAGCT  1554

Query  747  CTTGGGCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTGGAGGGCTGCTATCTTCCCGAGGTCGAGAGAGGC  820
            |||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1555  CTTGGGCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTGGAGGGCTGCTGTCTTCCCGAGGTCGAGAGAGGC  1628

Query  821  GCGTCTTCCTCTTTGAGCAAATCATCATCTTCAGTGAAGCCCTGGGAGGAGGAGTGAGAGGTGGAACACAGCCT  894
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCGTCTTCCTCTTTGAGCAAATCATCATCTTCAGTGAAGCCCTGGGAGGAGGAGTGAGAGGTGGAACACAGCCT  1702

Query  895  GGATATGTATACAAGAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG  968
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGATATGTATACAAGAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG  1776

Query  969  CTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCA  1042
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCA  1850

Query 1043  GTCAGGCCTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAACGCATTGCAGTCACCC  1116
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GTCAGGCCTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAACGCATTGCAGTCACCC  1924

Query 1117  ATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTGGGGAGCCCTGG  1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTGGGGAGCCCTGG  1998

Query 1191  AAGAATTCGGCTTGGAGATCAGGCCCAGGGCAGCACACACACACCCATCAATGGCTCTCTCCCCTCTCTGCTGC  1264
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  AAGAATTCAGCTTGGAGATCAGGCCCAGGGCAGCACACACACACCCATCAATGGCTCTCTCCCCTCTCTGCTGC  2072

Query 1265  TGTCACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCCCTTGGTGACATCCCCCAGGCT  1338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGTCACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCCCTTGGTGACATCCCCCAGGCT  2146

Query 1339  CCCCATGACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGA  1412
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CCCCATGACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGA  2220

Query 1413  AGATGAGCTG----------------------------------------------------------------  1422
            ||||||||||                                                                
Sbjct 2221  AGATGAGCTGTAACTGGTGAAAACCATGGGGGTGGTGCTGACTCAGCCGCCTATTCCCCAAGGAGCTTCAGGGC  2294

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2295  AGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATATC  2368

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2369  AACTTGGAGGAGAACACCTAGACCCAAGGACTTTTTTCTGCCCAAGGAACACAGTTTCCTTCAGCTCCCATCCC  2442

Query 1423  --------------------------------------------------------------------------  1422
                                                                                      
Sbjct 2443  TATGCATGCATCATGGTCCCCCCAAAAGGAGGATATGTGGGTGGGTGGGAGGGCTGGGGCAGGGGCCAGATAGA  2516

Query 1423  --------------------------------------------------------------------  1422
                                                                                
Sbjct 2517  AATTATTGGTTTTGTTTTTTAATTTTGTTTTTCCTGTTTTCTGAGAATAAAGGTTTTGTTATATCACC  2584

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