Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13049
- Subject:
- NR_046223.2
- Aligned Length:
- 2584
- Identities:
- 1420
- Gaps:
- 1162
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCAGCTCTCCGCTCCGCTGGGACCCGCACAGCGCCAGTGGCTCGGGGGTCGGCCCTCGCCTCCTCCCCGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGCCTAGAGCCACCCCTAACCAGAGGCCGGAGACAGCTGGAGCGGCTGCCGCATCCCGGCCCAGCCTCCCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCATCCCTCCCCCTTCCACTGGACATCTGGACCCTAGGCCCCCGCACCGACAGGGTTCCGGAAACCCTCCCCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCAGCCCGGCGGCCGGGCCCCGCGCCTCTCTCTCTCTAGAGCCCCCAGCCCTCCTCAAGACTAGACTTCCGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACCCCTGGACACCTCCTCCCGGTCCCCTCCCTCCCCCCCTCCCACAGCCTGGACCGGGGTAGGAGGGAGGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTGTGCGCCCGGCGCCGTCCCCGCCCCGCCCCCCGTGATTCCCCCTGCATGGCCGGCCCGGGTGGGGGGCGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGGGGCCCGGGCGCCATGCGGGGGGGGCACAAAGGGGGTCGCTGTGCCTGTCCCCGTGTGATCCGAAAAGTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGCAAAATGCGGCTGCTGCTTCGCCCGGGGGGGACGTGGGGTGCCCTGGTGAAATTTTCTATCCTGGCCAACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAATGAGGATGGCAAGAGAGTGAGCCCTTGGAGAGAGAGGCTGAGCATCATGAAGAGAAGACCCTGGGAGTTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTGGGGACCCTGAGTCTGGAGCTGGGGCAAGGCCCCCCAGGGCCCGTCAGTGGCCTGAGGAGATGGTTGGATC 740
Query 1 --------------------------------------------------------------------ATGTTG 6
||||||
Sbjct 741 ATTCCAAACATTGTCTCAGTGTGGAAACTGAGGCAGACAGTGGTCAGGCAGGACCATATGAGAACTGGATGTTG 814
Query 7 GAGCCAGCTCTAGCCACAGGAGAGGAGCTGCCGGAACTGACCTTGCTGACCACACTGTTGGAGGGCCCTGGAGA 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAGCCAGCTCTAGCCACAGGAGAGGAGCTGCCGGAACTGACCTTGCTGACCACACTGTTGGAGGGCCCTGGAGA 888
Query 81 TAAGACGCAGCCACCTGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAGGAGGAACAGAAGAAGAAGGCTC 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TAAGACGCAGCCACCTGAAGAGGAGACTTTGTCCCAAGCCCCTGAGAGTGAGGAGGAACAGAAGAAGAAGGCTC 962
Query 155 TGGAAAGGAGTATGTATGTCCTGAGTGAACTGGTAGAAACAGAGAAAATGTACGTGGACGACTTGGGGCAGATT 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGAAAGGAGTATGTATGTCCTGAGTGAACTGGTAGAAACAGAGAAAATGTACGTGGACGACTTGGGGCAGATT 1036
Query 229 GTGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAGTCTTCGAGGCCGTGACAGGATTGTGTT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTGGAGGGTTATATGGCCACCATGGCTGCTCAGGGGGTCCCCGAGAGTCTTCGAGGCCGTGACAGGATTGTGTT 1110
Query 303 TGGGAATATCCAGCAAATCTATGAGTGGCACCGAGACTATTTCTTGCAAGAGCTACAACGGTGTCTGAAAGATC 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGGGAATATCCAGCAAATCTATGAGTGGCACCGAGACTATTTCTTGCAAGAGCTACAACGGTGTCTGAAAGATC 1184
Query 377 CTGATTGGCTGGCTCAGCTATTCATCAAACACGAGCGCCGGCTGCATATGTATGTGGTGTACTGTCAGAATAAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGATTGGCTGGCTCAGCTATTCATCAAACACGAGCGCCGGCTGCATATGTATGTGGTGTACTGTCAGAATAAG 1258
Query 451 CCCAAGTCAGAGCATGTGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCG 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCCAAGTCAGAGCATGTGGTGTCAGAGTTTGGGGACAGCTACTTTGAGGAGCTCCGGCAGCAGCTGGGGCACCG 1332
Query 525 CCTGCAGCTGAACGACCTCCTCATCAAACCTGTGCAGCGGATCATGAAATACCAGCTGCTGCTCAAGGATTTTC 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCTGCAGCTGAACGACCTCCTCATCAAACCTGTGCAGCGGATCATGAAATACCAGCTGCTGCTCAAGGATTTTC 1406
Query 599 TCAAGTATTACAATAGAGCTGGGATGGATACTGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCC 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCAAGTATTACAATAGAGCTGGGATGGATACTGCAGACCTAGAGCAAGCTGTGGAGGTCATGTGCTTTGTGCCC 1480
Query 673 AAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGGGGAAGCT 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAGCGCTGCAACGATATGATGACGCTGGGGAGATTGCGGGGATTTGAGGGCAAACTGACTGCTCAGGGGAAGCT 1554
Query 747 CTTGGGCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTGGAGGGCTGCTATCTTCCCGAGGTCGAGAGAGGC 820
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1555 CTTGGGCCAGGACACTTTCTGGGTCACCGAGCCTGAGGCTGGAGGGCTGCTGTCTTCCCGAGGTCGAGAGAGGC 1628
Query 821 GCGTCTTCCTCTTTGAGCAAATCATCATCTTCAGTGAAGCCCTGGGAGGAGGAGTGAGAGGTGGAACACAGCCT 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCGTCTTCCTCTTTGAGCAAATCATCATCTTCAGTGAAGCCCTGGGAGGAGGAGTGAGAGGTGGAACACAGCCT 1702
Query 895 GGATATGTATACAAGAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GGATATGTATACAAGAACAGCATTAAGGTGAGCTGCCTGGGACTGGAGGGGAACCTCCAAGGTGACCCTTGCCG 1776
Query 969 CTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCA 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTTTGCACTGACCTCCAGAGGGCCAGAGGGTGGGATCCAGCGCTATGTCCTGCAGGCTGCAGACCCTGCTATCA 1850
Query 1043 GTCAGGCCTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAACGCATTGCAGTCACCC 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GTCAGGCCTGGATCAAGCATGTGGCTCAGATCTTGGAGAGCCAACGGGACTTCCTCAACGCATTGCAGTCACCC 1924
Query 1117 ATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTGGGGAGCCCTGG 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATTGAGTACCAGAGACGGGAGAGCCAGACCAACAGCCTGGGGCGGCCAAGAGGGCCTGGAGTGGGGAGCCCTGG 1998
Query 1191 AAGAATTCGGCTTGGAGATCAGGCCCAGGGCAGCACACACACACCCATCAATGGCTCTCTCCCCTCTCTGCTGC 1264
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AAGAATTCAGCTTGGAGATCAGGCCCAGGGCAGCACACACACACCCATCAATGGCTCTCTCCCCTCTCTGCTGC 2072
Query 1265 TGTCACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCCCTTGGTGACATCCCCCAGGCT 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGTCACCCAAAGGGGAGGTGGCCAGAGCCCTCTTGCCACTGGATAAACAGGCCCTTGGTGACATCCCCCAGGCT 2146
Query 1339 CCCCATGACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGA 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCCCATGACTCTCCTCCAGTCTCTCCAACTCCAAAAACCCCTCCCTGCCAAGCCAGACTTGCCAAGCTGGATGA 2220
Query 1413 AGATGAGCTG---------------------------------------------------------------- 1422
||||||||||
Sbjct 2221 AGATGAGCTGTAACTGGTGAAAACCATGGGGGTGGTGCTGACTCAGCCGCCTATTCCCCAAGGAGCTTCAGGGC 2294
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2295 AGTCCTTCTGGCACTGCTCCAGAATTCCTCCTTCTTGGTGTGTCTGGAGGGTGGGCAAGGCTGGGAGGGATATC 2368
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2369 AACTTGGAGGAGAACACCTAGACCCAAGGACTTTTTTCTGCCCAAGGAACACAGTTTCCTTCAGCTCCCATCCC 2442
Query 1423 -------------------------------------------------------------------------- 1422
Sbjct 2443 TATGCATGCATCATGGTCCCCCCAAAAGGAGGATATGTGGGTGGGTGGGAGGGCTGGGGCAGGGGCCAGATAGA 2516
Query 1423 -------------------------------------------------------------------- 1422
Sbjct 2517 AATTATTGGTTTTGTTTTTTAATTTTGTTTTTCCTGTTTTCTGAGAATAAAGGTTTTGTTATATCACC 2584
