Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13070
- Subject:
- XM_011539249.1
- Aligned Length:
- 2426
- Identities:
- 1011
- Gaps:
- 1381
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCAGCCTCAGGGGTGCCCAGAGGATGCGACATCCTCATCGTCTACAGCCCGGATGCCGAGGAATGGTGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTACCTGCAGACCCTGTTCCTGTCCAGTCGGCAGGTCCGCAGCCAGAAGATACTGACTCACAGGCTGGGCCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGCCTCCTTCTCGGCAGAGGACCTAAGCCTTTTCCTCAGCACCCGCTGTGTCGTGGTGCTGCTGTCCGCGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGTGCAGCACTTCCACAAGCCCGCCTTGCTGCCCCTGCTGCAGAGAGCTTTCCATCCTCCGCACCGCGTGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGGCTGCTCTGCGGCGTGCGGGACAGCGAGGAGTTCCTAGACTTCTTTCCAGATTGGGCCCATTGGCAGGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCACCTGTGACGATGAGCCAGAGACCTACGTGGCAGCTGTGAAAAAAGCCATTTCCGAAGATTCTGGCTGTGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAGTCACTGACACTGAGCCTGAGGACGAGAAGGTTGTTTCCTACTCGAAGCAGCAGAACCTGCCGACGGTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCACCTGGGAACCTGATGGTGGTGCAGCCGGACCGCATTCGCTGTGGGGCAGAAACCACTGTCTATGTTATTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAGATGTAAGCTGGATGACAGGGTGGCGACAGAAGCAGAGTTTTCTCCTGAGGATTCTCCCTCTGTAAGGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGCCAAGGTGGAGAATGAGTACACCATTTCAGTGAAGGCTCCCAACCTTTCATCTGGGAACGTTTCTCTGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATATATTCTGGAGACTTAGTGGTGTGTGAAACCGTTATCAGCTATTATACTGACATGGAAGAAATTGGGAATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TATTGTCCAATGCCGCGAATCCTGTGGAATTCATGTGTCAGGCCTTTAAAATTGTGCCCTACAACACAGAGACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CTTGATAAACTGCTAACCGAATCCCTGAAGAACAATATCCCTGCAAGCGGACTGCACCTCTTTGGAATCAACCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTGGAAGAAGAAGATATGATGACAAATCAGAGGGATGAAGAGCTGCCCACCCTGTTGCATTTTGCTGCGAAGT 1036
Query 1 ATG------AG--------------GTTTTTCAC------------------------CAGCGTGGCC----TG 26
||| || |||..|||| |||||||||| .|
Sbjct 1037 ATGGACTGAAGAACCTCACTGCCTTGTTGCTCACCTGCCCAGGAGCCCTGCAGGCGTACAGCGTGGCCAACAAG 1110
Query 27 CTATGG-------------ATCTTGTCT-----------CTT----------------TGCATC--TGAGT--- 55
| |||| |.|.|..|| ||| |.|||| .||||
Sbjct 1111 C-ATGGCCACTACCCCAACACCATCGCTGAGAAACACGGCTTCAGGGACCTGCGGCAGTTCATCGACGAGTATG 1183
Query 56 ---------------TGCT-------------------GATCAGATGCA-----AGGA--CTG--GC------- 79
|||| ||.|.|||||| |||| ||| ||
Sbjct 1184 TGGAAACGGTGGACATGCTCAAGAGTCACATTAAAGAGGAACTGATGCACGGGGAGGAGGCTGATGCTGTGTAC 1257
Query 80 ---TCAAAGGAAGACCAGCTCTCTTCACTGCCCTGCT-------AGCT--------------TGTGTCCTTTAT 129
||.|.| |.|||.||.|| |||.|.|||||| .||| ||||.|....||
Sbjct 1258 GAGTCCATG---GCCCACCTTTC--CACAGACCTGCTTATGAAATGCTCGCTCAACCCCGGCTGTGACGAGGAT 1326
Query 130 CTTTGTGAGTGGACTGG-TGCCAAGCATGTCCCAG----------GGTCATCTTATGTTGAAATGCTTCAGGCC 192
||.|.|||||..| ||| |||| ..|||||||| .|.|.|| |||||||||||||||||||||
Sbjct 1327 CTCTATGAGTCCA-TGGCTGCC---TTTGTCCCAGCTGCCACTGAAGACCTC-TATGTTGAAATGCTTCAGGCC 1395
Query 193 AGTACATCTAACCCAATCCCTGGAGATGGTTTCTCTCGGGCCACTAAGGACTCTATGATCCGCAAGTTTTTAGA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 AGTACATCTAACCCAATCCCTGGAGATGGTTTCTCTCGGGCCACTAAGGACTCTATGATCCGCAAGTTTTTAGA 1469
Query 267 AGGCAACAGCATGGGAATGACCAATCTGGAGAGAGATCAGTGCCATCTTGGTCAGGAAGAAGATGTTTATCACA 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1470 AGGCAACAGCATGGGAATGACCAATCTGGAGAGAGATCAGTGCCATCTTGGTCAGGAAGAAGATGTTTATCACA 1543
Query 341 CGGTGGATGACGATGAGGCCTTTTCTGTGGACTTGGCCAGCAGGCCCCCTGTCCCAGTGCCCAGACCAGAGACC 414
||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1544 CGGTGGATGACGATGAGGCCTTTTCTGTGGACCTGGCCAGCAGGCCCCCTGTCCCAGTGCCCAGACCAGAGACC 1617
Query 415 ACTGCTCCTGGTGCTCACCAGCTGCCTGACAACGAACCATACATTTTTAAAGTTTTTGCAGAAAAAAGTCAAGA 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 ACTGCTCCTGGTGCTCACCAGCTGCCTGACAACGAACCATACATTTTTAAAGTTTTTGCAGAAAAAAGTCAAGA 1691
Query 489 GCGGCCTGGGAATTTCTACGTTTCCTCAGAGAGCATCAGGAAAGGGCCGCCCGTCAGACCATGGAGGGACAGGC 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 GCGGCCTGGGAATTTCTACGTTTCCTCAGAGAGCATCAGGAAAGGGCCGCCCGTCAGACCATGGAGGGACAGGC 1765
Query 563 CCCAGTCGAGTATATATGACCCTTTTGCGGGAATGAAAACGCCAGGCCAGCGGCAGCTTATCACCCTCCAGGAG 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1766 CCCAGTCGAGTATATATGACCCTTTTGCGGGAATGAAAACGCCAGGCCAGCGGCAGCTTATCACCCTCCAGGAG 1839
Query 637 CAGGTGAAGCTGGGCATTGTCAACGTGGATGAGGCTGTGCTCCACTTCAAAGAGTGGCAGCTCAACCAGAAGAA 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 CAGGTGAAGCTGGGCATTGTCAACGTGGATGAGGCTGTGCTCCACTTCAAAGAGTGGCAGCTCAACCAGAAGAA 1913
Query 711 ACGATCGGAGTCCTTTCGTTTCCAGCAGGAAAATCTTAAACGGCTAAGAGACAGCATCACCCGAAGACAGAGAG 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 ACGATCGGAGTCCTTTCGTTTCCAGCAGGAAAATCTTAAACGGCTAAGAGACAGCATCACCCGAAGACAGAGAG 1987
Query 785 AGAAGCAAAAATCAGGAAAGCAGACAGACTTGGAGATCACGGTCCCAATTCGGCACTCACAGCACCTGCCTGCA 858
|||||||||||||||||||||||||||
Sbjct 1988 AGAAGCAAAAATCAGGAAAGCAGACAG----------------------------------------------- 2014
Query 859 AAAGTGGAGTTTGGAGTCTATGAGAGTGGCCCCAGGAAAAGCGTCATTCCCCCTAGGACGGAGCTGAGACGAGG 932
Sbjct 2015 -------------------------------------------------------------------------- 2014
Query 933 AGACTGGAAAACAGACAGCACCTCCAGCACAGCAAGTAGCACAAGTAACCGCTCCAGCACCCGGAGCCTCCTCA 1006
|||||||||||||||||||||||||||||||||||||||
Sbjct 2015 -----------------------------------GTAGCACAAGTAACCGCTCCAGCACCCGGAGCCTCCTCA 2053
Query 1007 GTGTGAGCAGCGGGATGGAAGGGGACAACGAGGATAATGAAGTCCCTGAGGTTACCAGAAGTCGCAGTCCAGGC 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2054 GTGTGAGCAGCGGGATGGAAGGGGACAACGAGGATAATGAAGTCCCTGAGGTTACCAGAAGTCGCAGTCCAGGC 2127
Query 1081 CCCCCACAAGTGGATGGGACACCCACCATGTCCCTCGAGAGACCCCCCAGGGTGCCTCCGAGAGCTGCCTCACA 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 CCCCCACAAGTGGATGGGACACCCACCATGTCCCTCGAGAGACCCCCCAGGGTGCCTCCGAGAGCTGCCTCACA 2201
Query 1155 GAGGCCTCCGACCAGGGAGACCTTCCATCCTCCTCCACCTGTTCCACCCAGAGGACGC 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2202 GAGGCCTCCGACCAGGGAGACCTTCCATCCTCCTCCACCTGTTCCACCCAGAGGACGC 2259
