Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13098
Subject:
NM_001321676.2
Aligned Length:
1103
Identities:
255
Gaps:
838

Alignment

Query    1  ATGGCGTCCGAACTTTGTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCGTCCGAACTTTGTAAGACGATCTCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAG  74

Query   75  GAATCTGCACCATTTTCCATTGGAGTTACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAATCTGCACCATTTTCCATTGGAGTTACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAA  148

Query  149  GGAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTGAAGACAACTG--  220
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |.|.|||  
Sbjct  149  GGAACTCCCTGACATCCTTGCCAGAAAACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACT----ATACCTGCA  218

Query  221  ----------TTAGTTTTG--------------TGG----CTT-----ACTGCTGCTCCACCCAGTGTCTGCA-  260
                      .|||||.||              |||    |||     |||          |||.||||||.| 
Sbjct  219  CTCAAATAACATAGTTGTGGTTCCGGAAGCCATTGGGTCTCTTGTAAAACT----------CCAATGTCTGGAT  282

Query  261  ------GAC---------------TTTTGACCTG-----------CTGAGT-----------------------  279
                  |||               .||||.||.|           |||||.                       
Sbjct  283  CTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGGTCGTCTGAGAGCTTTACGTCATCTTCGATTAGC  356

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  357  TAATAACCAACTGCAATTCCTACCTCCAGACCATGAGAACATTGCTCTGAACTGGTGTTCCTGTGAACACAGTT  430

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  431  GGACTAACCGCTACTTGAGATGTGTGTTGTTCCATAAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTG  504

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  505  CCGCGCCATCTCTGCCAGCTGCCCAGCCTCAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACT  578

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  579  TGATTTAGGTCGATCTCGAGAACTACAGTATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTT  652

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  653  ATCTGTACAATAAAGTCATCGGGTGCAGTGGCTGTGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCC  726

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  727  TTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCT  800

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  801  CCCTCTGCAGGAATTGGCTATGAGAGGGCTGTATCATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGT  874

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  875  CTCCAATCTCATTACCCAGAAGTCTCCTAGAGCTGCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAG  948

Query  280  --------------------------------------------------------------------------  279
                                                                                      
Sbjct  949  CCTATGTTTACCATCGTCTACCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAA  1022

Query  280  -------------------------------------------------------------------  279
                                                                               
Sbjct 1023  GACAACTGTTAGTTTTGTGGCTTACTGCTGCTCCACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT  1089