Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13108
- Subject:
- NM_001102615.1
- Aligned Length:
- 2992
- Identities:
- 329
- Gaps:
- 2636
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGGACAGCGGTGACTCAAAGGACCAGCAACTCATGGTGGCACTTAGGGTCCGGCCCATCAGCGTGGCTGA 74
Query 1 --------------------------------------ATGAGCAGATGGTGGTTCTCATGGACCCAATGGAGG 36
|.||||||||||||||||||||||||||||||||||
Sbjct 75 GCTGGAGGAGGGAGCTACCCTCATCGCTCACAAGATGGACGAGCAGATGGTGGTTCTCATGGACCCAATGGAGG 148
Query 37 ATCCCGACGACATCCTGCGGGCGCATCGCTCCCGGGAGAAGTCCTACCTGTTCGACGTGGCCTTTGACTTCACC 110
|.||.||||||||.||||||||.||.||.||||||||||||||.|||||.||.||||||||||||||||||||.
Sbjct 149 ACCCTGACGACATTCTGCGGGCACACCGGTCCCGGGAGAAGTCATACCTCTTTGACGTGGCCTTTGACTTCACT 222
Query 111 GCCACCCAGGAGATGGTGTATCAGGCCACCACCAAGAGCCTCATCGAGGGCGTCATCTCAGGCTACAATGCCAC 184
|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 223 GCCACCCAGGAGATGGTATATCAGGCCACCACCAAGAGCCTCATCGAGGGCGTCATCTCAGGGTACAATGCCAC 296
Query 185 TGTCTTTGCCTATGGCCCCACAGGCTGTGGGAAAACCTACACCATGCTGGGCACAGACCAGGAGCCTGGCATCT 258
|||.||||||||||||||.||||||||||||||.||||||||||||||||||||.|||||.|||||.|||||||
Sbjct 297 TGTGTTTGCCTATGGCCCTACAGGCTGTGGGAAGACCTACACCATGCTGGGCACTGACCACGAGCCAGGCATCT 370
Query 259 ATGTTCAGACCCTCAACGACCTCTTCCGTGCCATCGAGGAGACCAGCAATGACATGGAGTATGAGGTCTCCATG 332
||||||.|||||||||.|||||.|||||.|||||||||||||||||||||||||||||.||||||||.||||||
Sbjct 371 ATGTTCGGACCCTCAATGACCTGTTCCGAGCCATCGAGGAGACCAGCAATGACATGGAATATGAGGTGTCCATG 444
Query 333 TCCTACCTGGAGATC----ATGCAGCTGC--------------------------------------------- 357
||||||||||||||| ||| ||.||.
Sbjct 445 TCCTACCTGGAGATCTACAATG-AGATGATCCGGGACCTACTGAACCCGGCCCTGGGGTACCTGGAGCTGAGGG 517
Query 358 -------------------------------------------------------------------------- 357
Sbjct 518 AAGACTCCAAAGGGGTGATCCAGGTGGCCGGGATCACCGAAGTGTCTACCATCAATGCGAAGGAGATCATGCAG 591
Query 358 -------------------------------------------------------------------------- 357
Sbjct 592 CTGCTGATGAAGGGGAACCGGCAGAGGACGCAAGAGCCCACAGCTGCCAACCAGACATCCTCCCGCTCCCACGC 665
Query 358 -------------------------------------------------------------------------- 357
Sbjct 666 CGTGCTCCAGGTGGCCGTGCGTCAGCGCAGCCGGGTCAAGAACATCCTCCAGGAGGTGCGGCAGGGCCGCCTGT 739
Query 358 -------------------------------------------------------------------------- 357
Sbjct 740 TTATGATTGACCTAGCTGGCTCCGAGCGTGCCTCTCAGACACAGAACCGGGGGCAGCGCATGAAGGAAGGAGCC 813
Query 358 -------------------------------------------------------------------------- 357
Sbjct 814 CACATCAACCGCTCTCTGCTGGCCCTGGGCAACTGCATCAATGCGCTGAGTGACAAGGGCAGTAATAAATACAT 887
Query 358 -------------------------------------------------------------------------- 357
Sbjct 888 CAACTATCGGGACAGCAAACTCACCCGGCTCCTGAAGGATTCACTAGGCGGGAACAGCCGCACTGTGATGATTG 961
Query 358 -------------------------------------------------------------------------- 357
Sbjct 962 CCCACATCAGTCCAGCGAGCACTGCCTTTGAAGAGTCCCGGAACACCCTGACCTACGCCGGCCGAGCCAAGAAT 1035
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1036 ATTAGGACTCGGGTGAAGCAGAACCTGCTCAACGTCTCCTACCACATCGCTCAGTACACCAGCATCATCGCTGA 1109
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1110 TCTGAGAGGCGAGATCCAGAGACTCAAGTGCAAGATCGACCAGCAGGCTGGGCGGGGTCAGGCCCGGGGCAAAC 1183
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1184 TGGACAGGGGTGACATCCGCCACATCCAAGCTGAGGTTCAGCTACACAGCGGGCAGGAAGGGCCCGCGGAGATG 1257
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1258 GGACAGCTTCGGGAGCAACTCATCAGCGCCTTCCACGAGCAGATGGATGTGCGCCGGCGCCTGCTGGAGCTGGA 1331
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1332 GAACCAGGCCATGGAAGTCCAGATTGACACCTCCCGTCACCTCCTCACCATCGCCGGCTGGGAGCACGAGAAGT 1405
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1406 CACGAAGGGCTCTCAAGTGGCGGGAGGAGCGAAGGAAGGAGTCCTACACCAAAGAGGACAGTGAGAAGGACTCG 1479
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1480 GACACAGGCGATGAGCCAGATAACCTGGAGCCACCTGAAGTGGCATCAGCCCGTGAAAACATCGCTGCCCTGGT 1553
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1554 GGGCGAACAGAAGAAGTTGCGCAAAGAGAAGCTGGCGCTGGAGCAGCGCTGCCGAGAGCTGCGTGCGCGTGGCC 1627
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1628 GGCGCCTGGAAGAGACGCTGCCGCGCCGCATCGGCTCGGAGGAGCAGCGCGAGGTGCTCAGCCTGCTGTGCCGC 1701
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1702 GTGCACGAGCTGGAGGTGGAAAACACCGAGATGCAGTCGCACGCTCTGCTCCGCGACAGCGCTCTGCGCCACCG 1775
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1776 CCGCGAGGCTGTGCGCCGCCTGGAGCAGCACCGCAGCCTCTGCGATGAGATCATCCAGGGCCAGCGGCAGATCA 1849
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1850 TCGACGACTACAATCTGGAGGTTCCCCGGCACCTGGAGGAACTCTACGAAGTCTACCTTCGGGAACTGGAAGAG 1923
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1924 GGCAGCCTGGAGCGGGCCACCATCATGGACCGAGTGGCCTCCAGAGCCCTGCAGGACAGCTCCTTGCCCAAAAT 1997
Query 358 -------------------------------------------------------------------------- 357
Sbjct 1998 CACTCCAGCAGGGGCCACACTGACCCCAGACTCTGACCTGGAGAGTGTGAAGACGCTAAGTTCTGAGGCCCAGC 2071
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2072 GCCCCCAAAACAACACCCTACCCCCACTTGGCACAGACAGTGAGTCCTACCATGTGTTCAAGGCCAGTCCCAGG 2145
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2146 GCCTGGCAGGTGAAGAGCTCCTCTGTGCCTACTCCGCCCCCCATCCAGGTGGGCAGCCTGGTGACCCAGGAGGC 2219
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2220 CCCACCACAGGACAGCCTGGGCAGCCAGATCAACTCTTCCCCGGAGAGCAGCGAGAACCTGTCAGAGATCCTTC 2293
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2294 TGTCCCATAAAGAGAGGAAAGAGATCCTGACGCGGACCAAGTGTATCTCGGTGAAGGCCGCCCAGCGGCGCTCC 2367
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2368 CGGGCCCTGGGAACGGAAGGGCGCCACCTGCTGGCACCTGCCACAGAGCGCAGCAGCCTATCCCTGCACTCGTT 2441
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2442 GAGCGAGGCTGATGATGCTCGCCCACCCGGGCAACTGGCCTGCAAGCGGCCGCCCAGCCCGACACTGCAGCATG 2515
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2516 CCATCAGCGAGGACAATCTATCTAGCAGCACAGGCGAGGGCCCCTCCAGGGCGGTAGGACCTCGAGGTGATGGC 2589
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2590 ACTGGGTCCTGGGTGCGTGGCCAGAAGAAATGCCTCAGCAAAAAAAGGGAGGAGTCACTGGAAGCGAAGAGGAG 2663
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2664 GAAGCGGAGGTCTCGGTCCTTTGAGGTCACAGGACAAGGGCTGTCCCGTCCCAAGACACACCTACTGGGACCTC 2737
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2738 GTCCCTCCGAGGGCCTTTCAGATCGCCGGATGCCGGCGTGTGGGCGGCCATCTCCTGGTGTCAGGCATCTGGGA 2811
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2812 AAAGTCTCTCTGCCTCTGGCCAAGGTCAAATTTCCTCCAAACCAGAACACAGGATCTGGAAACCCTTCACCCCT 2885
Query 358 -------------------------------------------------------------------------- 357
Sbjct 2886 TCTTGTTGCCCCCAACCAAGCCGGTGTTTCCCGTAGAGCTACACGTGGGCCCAGCCTACCCCATGGCTCAAGCA 2959
Query 358 -------------------------------- 357
Sbjct 2960 CCTTTGGCAAAGATGGACGCCTCCAGCATAAC 2991
