Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13184
Subject:
NR_146853.2
Aligned Length:
2380
Identities:
710
Gaps:
1669

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGTCTTCAGCTTTCACCGGCTGGGAGTCCGGAGCTGCAGCAGAGGCCACACCCAGGGCTTGGTGGTCCCGCGCT  74

Query    1  ------------------------------------------------------------------------AT  2
                                                                                    ||
Sbjct   75  TTCCGGAGCTCAGCAGGCGCTTGCTGCTTGAACCGGTCAAAGAAGGAACGAATGAATGACCCTTTTGCCAGGAT  148

Query    3  GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC  76
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGAGACCCGGGGGCCTCAGGGAGCTGCGAATCCCATGGACTCCTCCCGCAGCCTGGGGGACCTCGGGCCTTTTC  222

Query   77  CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC  150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGCGGGAGGTAGGGCGCGGGGCTCCGCTAGCTCCGGGCGCCCGGAATCCCGCGACGGCAGGGGCGAGCCGAAGC  296

Query  151  CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA  224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGGCGGCGGCCACGAGGACAGAACGGCAGATCGGGCCCTCGGACCTCGGGCCGGGGAGGAATTGGACCGTGA  370

Query  225  GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC  298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GTCCTGGGTCAGAGAGAAAGTGCTCTTTCTCCTGCACCCAGAGAGGTGGTTAGGGACTCGAGGGGACCCTGCAC  444

Query  299  GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT  372
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGAAGAGGTGGCCGGTGCAGAGGACCTTCCTCATGCGGGTGGAGAGGACCACGGCGAGGAGCCCAACTACCCT  518

Query  373  TCTGTCTTTCAACGAGAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA  446
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCTGTCTTTCAACGACAAAAGCGAATTTCTGGCAGGCGTGTAGCCCCGCCGCGGGACGCAGCAGACCCACCCAA  592

Query  447  ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA  520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATACGTGCTTGTGCGGGTGGAGGATTATCAGGTAACACAAGAAGTGTTGCAGACCTCCTGGGCCAAGGGTCGCA  666

Query  521  TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA  594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGACCACGAGGACTGAGGAGCACTTCGTGACCGCGCTCACTTTTCGCAGCAGTAGAGAGGGACAGCCTGGGGAA  740

Query  595  CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG  668
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CGCTGGGGCCCTGCTGAATCCCGGGCTCTCCAGGCACGAACAGGGGCATCCCGCGTCCACGCCGCGGGGAGGAG  814

Query  669  GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTC-------------------------------  711
            |||||||||||||||||||||||||||||||||||||||||||                               
Sbjct  815  GGTTTCACCGTCTCCAGGGACTTGGCTCGAGGAAATTAAACTCTAATGAGTAGCTCGAGAAATGTTCCGGGATG  888

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  889  GTGGATGAGCGATCATCCTTAAAAGAAAATGCTATTCTGGGAGCTCCAACCTGCAATTAACCTACAGAAGGAAC  962

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct  963  CTTTTGAGAGGCTGGTGCAGCGCTTCGGGGAGGCAGATTAAGAACTGACCTAGAAACAGAAGTGAAGTTTGAAG  1036

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1037  TCTGCTCTCTGCAAAGAGGGTGGGAGTGGGTGGAGAAGAGGCTTGTTTTAAAAGCCAAAAACAGAAAGTAAAAA  1110

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1111  GAAATGGGAAAGTAAAACCAAAGCAGCAAGTGACTCTCTTCTGATGTGCACTTTTCATTTTTCTCCCCCACATT  1184

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1185  TCAGTGTTAGAAAGAAAACGAGAGGAGCTAGGGAAAGAAGGAGTTGGGGACAGAAGACTAAGATTTCAACGTGA  1258

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1259  AATTCCATTTACAAAGGCTTTACTGCAAACAATAGCTAATTTAGTCCTGTAAACATGCATTTATCATACATTTT  1332

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1333  AATTTTAATATTAAAAATACTGCATGTAAATGTTCTGAACTAAAGGTAGATAGCAATATGTAGTTTGCCATAAA  1406

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1407  ATGAATGCATGTCTTATTCTTTTCCATAGTTCTTCATTAATGAGACTTGTAGTCAAGAATAGATTGAAGATACC  1480

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1481  ATTCTCCTTGTGTAGTTCAAAAAAATCTCCTCTGGTAATACTGAAACAACTAATTTTTCTTATTTTGTTTGTTC  1554

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1555  CTCTTTATTATTAAATACTATGTGAATTAACTCTTTAGTAGTTGGCCTGGTTGAAGCTCTGTGAGGAGCAAAGC  1628

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1629  AGCCCTCTCCAGGTGAACTGCTTGACTTTACCACCTGAAGGAGTATTTACTGCAAGAATTAACAAAGCAGGTGT  1702

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1703  TCCTGATCCAAGCAGAACCCTGTTATTTGAAGAGCCTGAGAAATCTTATCCCGTTTACAAATGTCCTGGGAGTG  1776

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1777  CATCCAAAGTGAAACTTGGGCATCCTCAATACTAAGAAATCTCTGAGAATGACTGGATCTTGGCTCTTTGATCT  1850

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1851  TACCTCTACTCCTCTGAAAAACATGATTATCTAAAATTGTGTTAGGTGGATGAACCGCATCAAAGACTTCCAGA  1924

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1925  AGCCACTCCAGTGACCATAAGATAAATGTCAGAATCGCATAACCCCCAGGATCAGCCTGTTGCTCAGGCTGGAG  1998

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 1999  TGCAATGGCACGATCTGAGCTCACTGCAACCACCTGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCT  2072

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2073  GAGTAGCTGGGATTACAGGCGCCTGCAACCACACCCAGCTAATTTTTGTACTTTTAGTAGAGATGGGGTTTTGC  2146

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2147  CATGTTGGCCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGAT  2220

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2221  TACAGGCTTGAGCCACCGAGCCTGGCCTCTACTTTTTATTACTGTCATGTAGTTAGTGATAAAATGCTTCTATC  2294

Query  712  --------------------------------------------------------------------------  711
                                                                                      
Sbjct 2295  TGAAAAAAAATTTGTTGTTCTAAATTCTAAAAAATTCTCGTGATTATTGCTTAAATTTTAATAAAGCAGATGTG  2368

Query  712  ------------  711
                        
Sbjct 2369  ATTTTCAAATTA  2380

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