Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13193
Subject:
NR_156454.1
Aligned Length:
2515
Identities:
390
Gaps:
2113

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCCGCCGCTTGGCTTCTTTCACACGGGTTGCTTCGGAGGAATCCGCCGTGCAAATCTGTCCGCCCCCTTGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTGATCCCCCGAAGAGCTTCTGTCGCCGCTCTAGGAATAGAGACATTGAAGTTTGGGACAAGATATTTATCTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACTTCTGTGTCAAAATTAGCGACCTGCTATGGCAATGAAGAAAGAAACTGAATTTGTCATTTTCACCTGAAGAA  222

Query    1  --ATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACATA  72
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AAATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACATA  296

Query   73  CTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGTTTTTAC  146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGTTTTTAC  370

Query  147  ACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTCTTACACATTT  220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTCTTACACATTT  444

Query  221  ATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGAAAACAGTGGCAACT  294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGAAAACAGTGGCAACT  518

Query  295  CTGTGGGATGGACATGCAGCCGTTTGGCATGGT----AAG--CAAGG----------ATAC-------------  339
            |||||||||||||||||||||||||||||||||    |||  ||.||          ||||             
Sbjct  519  CTGTGGGATGGACATGCAGCCGTTTGGCATGGTTATGAAGTTCATGGAATGGAAAAAATACCAGAAGATGGACC  592

Query  340  -------------TTTCACCTTTG---TGTTGCCA--------------TTCATGTGTGCT-------------  370
                         |||.|.|.|.|   |.||.|.|              ||||||   |||             
Sbjct  593  AGCACTTATAATTTTTTATCATGGAGCTATTCCTATAGATTTTTACTATTTCATG---GCTAAAATATTTATAC  663

Query  371  ------GCA----TTG--GA-------------ACTGTG---TTACCATTCC-------ATTTTATT----GAT  405
                  |||    |||  ||             |||.||   |||..|||||       |.||||||    |||
Sbjct  664  ACAAAGGCAGAACTTGCCGAGTAGTAGCTGATCACTTTGTCTTTAAAATTCCAGGGTTTAGTTTATTACTGGAT  737

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  738  GTGTTTTGTGCTCTACATGGACCAAGAGAAAAATGTGTTGAAATTCTGAGGAGTGGCCACTTGTTAGCTATCTC  811

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  812  ACCAGGTGGAGTTCGAGAAGCCCTAATTAGTGATGAAACTTATAACATCGTATGGGGTCATCGCAGAGGCTTTG  885

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  886  CTCAGGTTGCAATTGATGCAAAAGTGGGTTATTTAGGTGGCTTTATGAAAAATTCCGCTATCCATTTGCTCCAA  959

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct  960  TGTATGGAGGTTTTCCAGTGAAGTTACGGACCTATTTAGGCGACCCCATTCCGTATGACCCACAGATAACAGCG  1033

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1034  GAAGAATTAGCTGAAAAGACGAAGAATGCTGTTCAAGCTTTGATTGATAAGCACCAAAGAATACCAGGAAACAT  1107

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1108  TATGAGTGCTTTGTTAGAACGTTTTCATTGATAACAAAGGGTCAACTAGAAGATGATTTAGTACATTTATATTA  1181

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1182  AATGTTTGTATCTAAGGTACTGTCTTCTGAATTTTGTAGGTCCTATAATTAGTATTTTTTAAAAAAATCATGTT  1255

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1256  AATAAGCATCTTTCACAGAATTCGTTTCTTTAAAATAGTCAATTTTGTTTTTGCAATTGTGTCAAATACTAACA  1329

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1330  AATTACACACCTAGTAATTCAGAAAAAGATGTCTTATTTGTAAATTCCTAACAATTTATGCTAAACATATAGAT  1403

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1404  TCTTAAGTTTATTAATAACAGCAGTTTAGGTTAAACAAACATTCCTGGATAATGCGTTAAATTTCTGTATCTGT  1477

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1478  CGCCCTGAGCTGATTTTGAAAGATGGTATAAGCTAGGGGTTAGTATAGTTGTTTAAGTTAGAAAAAACATGCTG  1551

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1552  TTGTCTGCCCCTCATTCCCTTCATGACCTTGGGCAAGTCACGTAATGTTTTTGTGCCTCAACAATTCACTTTTT  1625

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1626  AAAAACATGATCGTATGATGAATGATATTATTTTGTTATTTATATTTACTGTGATTGATAACTGTTGAACCAAA  1699

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1700  ATAATAAAATAATTAATTTAAACAATGTCAAAATCCTTTAGCAGTTATGTATATATTTTCTCCATTGTGTGTTT  1773

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1774  AAATTATGTCATGTCCAGTTGCCAAGCACAATGAAAAAGATGTATTATTTTTTAAATTGAATAAAAAATTAGGA  1847

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1848  AAAATAAAATTTCTAATTATTATTTTTAGTATGATATTTTTAACAAGAGTCTATAGGCAAACAATATAGGGTGT  1921

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1922  GCTGTGCATTGTCAGCCCTATACTGTGGTCTTAATAATGCCAGCTTAAAAATCACTGTTGTGCTCTGCATTTCG  1995

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 1996  TGTGTTAGAAGCTGATTCTAGGCTGAGGAAAGCAAGAGTTCTCTACTTTTGCTCAATATTGAGGCTTACCCAGT  2069

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2070  TTGACTCTACAGCCAGTGAAGTGGTTTATTGCTTCAATAAAAATATACTTGAATGATGAATTTATTTATGTTTT  2143

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2144  GTTTTGTTTTTATTTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATC  2217

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2218  CACCTGCCTCAGCCTCCCAACTTGCTGGGATTACAGGTGTGAGCCACCATGCCCAGCCTGAATGATGAATTTAT  2291

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2292  GTGAACACAAAGCCCTCTGAAAAATTAATGATTTTCAATTTGTTGTCTTCTTGAAAACTGAATTTAAGTATTAT  2365

Query  406  --------------------------------------------------------------------------  405
                                                                                      
Sbjct 2366  TTAAACAGAAAAGTGTCAGAAATCAAATGCAGTATCTCCCTCTCCCTTTTTTAAATGTTGAATTAGTAGGGTTT  2439

Query  406  -------------------------------------------------------------------------  405
                                                                                     
Sbjct 2440  TTGTATAGCTTTTTGTATTGTGTGTATTTATGATATGTGAAATGTACATAAAATTAAACAATGTGAAAATAAA  2512

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