Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13241
- Subject:
- XM_017322152.1
- Aligned Length:
- 2097
- Identities:
- 1260
- Gaps:
- 645
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGGAGTCCGTCTCTGTCCACCCTGAAGGTCTCAGGGATCGAACTCAGCTCCTCAGGATTGGCAGCATGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTTACTGTCTGAGCCTTCTCGAAGGCCCCCAGATAAAGTTTTCAGAAGTTCTCGGAACGCAGGTTTCACCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATGCTGCGGCAGAGGGCGTGGCCTGGGCGCCTGCGGGGGCGTGCGTTGCCTCCATCGGCCCCGCCCCGCCTCTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACCACAGGTTTCTCAATGTGTGCTGGCGGAGGGCGCGGCCTGCGCACCTGCGGGGGCGTGGCTTTGCCCTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCACCTCCCTCAGGAGCCTCCGGGAAGGCGGCGGCCGCGCAGCGGGAGCAGCCCGGTCTCCGCGCAGCGAGGCG 370
Query 1 -----------------------------ATGTCTGTGCAGGTAGCGGCTCCTGGAAGTGCAGGGCTGGGCCCA 45
||||||||||||||.||.||.||||||||..||||||||||||||
Sbjct 371 GCTCGGGCGGGCGGCCGTCAGGAGCAGCCATGTCTGTGCAGGTGGCAGCCCCTGGAAGCACAGGGCTGGGCCCA 444
Query 46 GAGCGCCTGAGCCCTGAGGAGCTGGTGCGGCAGACGCGGCAAGTGGTCCAGGGGCTGGAGGCGCTGCGGGCAGA 119
||.|||||||.|||.||||||||||||||||||||.||.||.||.||.|||||.||||||||.||||||||.||
Sbjct 445 GAACGCCTGAACCCCGAGGAGCTGGTGCGGCAGACACGACAGGTTGTACAGGGACTGGAGGCCCTGCGGGCCGA 518
Query 120 GCACCATGGCCTGGCTGGGCACCTGGCGGAGGCCCTGGCGGGACAGGGCCCGGCAGCCGGCTTGGAGATGCTGG 193
|||||||.|.|||||||||||||||||||||||||||||.||||..|||||.|..||.||..|||||.||||||
Sbjct 519 GCACCATAGTCTGGCTGGGCACCTGGCGGAGGCCCTGGCTGGACCAGGCCCTGTGGCTGGTGTGGAGCTGCTGG 592
Query 194 AGGAAAAGCAGCAGGTGGTGAGCCACTCGCTGGAGGCCATCGAGCTGGGGCTGGGCGAGGCCCAGGTGCTGCTG 267
|.||.|||||.||||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 593 AAGAGAAGCAACAGGTGGTGAACCACTCGCTGGAGGCCATCGAGCTGGGGCTGGGTGAGGCCCAGGTGCTGCTG 666
Query 268 GCCCTGTCGGCACATGTGGGTGCACTGGAGGCAGAGAAGCAGCGGCTGCGCTCGCAGGCCCGGCGGCTGGCCCA 341
||||||||.|||||.|||.|||...|||||||.|||||||||.||||.||..|.|||||.|||.||||.|||||
Sbjct 667 GCCCTGTCCGCACACGTGAGTGTGTTGGAGGCTGAGAAGCAGAGGCTACGGGCACAGGCACGGAGGCTAGCCCA 740
Query 342 GGAGAACGTGTGGCTGCGGGAGGAACTGGAGGAGACGCAGCGGCGGCTTCGGGCCAGCGAGGAGTCCGTGGCCC 415
.||||||...|||||.||.|||||.|||||||||||.|||.||||.||.|||||||||||||||.|.|||||||
Sbjct 741 AGAGAACACATGGCTTCGAGAGGAGCTGGAGGAGACACAGAGGCGACTGCGGGCCAGCGAGGAGGCTGTGGCCC 814
Query 416 AGCTGGAGGAGGAGAAGCGCCACCTGGAGTTCCTGGGGCAGCTGCGACAGTACGACCCACCGGCGGAGAGCCA- 488
|||||||.|||||||||.|||||||..|||||||||||||||||.|.|||||.|||||.||.|.|||||||||
Sbjct 815 AGCTGGAAGAGGAGAAGAGCCACCTCCAGTTCCTGGGGCAGCTGAGGCAGTATGACCCGCCCGAGGAGAGCCAG 888
Query 489 --GTCTGAGTCCCCGCCTCGCCGAGACAGCCTGGCCTCCCTGTTCCCCAGCGAGGAGGAGGAGAGGAAAGGTCC 560
|.|.||||||||.|||||||||||||||.||||.||.|||||||||||.||.||||||||.|.|||||||||
Sbjct 889 AGGCCCGAGTCCCCCCCTCGCCGAGACAGCTTGGCATCTCTGTTCCCCAGTGAAGAGGAGGAAAAGAAAGGTCC 962
Query 561 TGAGGCCGCAGGAGCAGCAGCTGCTCAGCAGGGTGGCTATGAGATCCCTGCCCGCCTTCGGACCCTGCATAACC 634
||||||.||||||||||||||.||.|||||||||||||||||||||||.||.||.||.|||||||||||.||||
Sbjct 963 TGAGGCAGCAGGAGCAGCAGCCGCGCAGCAGGGTGGCTATGAGATCCCAGCTCGTCTGCGGACCCTGCACAACC 1036
Query 635 TCGTGATCCAGTACGCGGGGCAGGGCCGCTATGAGGTGGCGGTGCCTCTGTGCCGCCAGGCCTTGGAGGACCTG 708
|.|||||||||||.||.||.||||||||||||||||||||.||.||.||.||.||||||||..|||||||||||
Sbjct 1037 TGGTGATCCAGTATGCTGGCCAGGGCCGCTATGAGGTGGCAGTTCCCCTATGTCGCCAGGCTCTGGAGGACCTG 1110
Query 709 GAGCGCAGCTCGGGCCACTGCCACCCTGACGTGGCCACCATGCTCAACATCCTGGCGCTGGTGTACCGGGACCA 782
|||||.|||||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||.|||||||
Sbjct 1111 GAGCGGAGCTCGGGCCACTGCCATCCTGACGTGGCCACCATGCTCAACATCCTGGCACTCGTGTACAGGGACCA 1184
Query 783 GAACAAGTACAAAGAAGCCACAGACCTTCTCCATGATGCCCTGCAGATCCGGGAGCAGACGCTGGGCCCTGAGC 856
||||||.|||||.|||||.||.||.|||||.||.||.|||||||||||||||||.|||||||||||.|||||.|
Sbjct 1185 GAACAAATACAAGGAAGCTACGGAGCTTCTTCACGACGCCCTGCAGATCCGGGAACAGACGCTGGGTCCTGAAC 1258
Query 857 ACCCCGCGGTGGCCGCCACGCTCAACAACTTGGCTGTCCTCTATGGGAAGCGTGGGCGTTACCGGGAGGCAGAG 930
||||.||.|||||.|||||.|||||||||.||||||||||||||||.||.|||||.|||||||||||||||||.
Sbjct 1259 ACCCTGCAGTGGCTGCCACCCTCAACAACCTGGCTGTCCTCTATGGAAAACGTGGACGTTACCGGGAGGCAGAA 1332
Query 931 CCCCTGTGCCAGCGCGCTTTGGAGATCCGAGAGAAGGTCCTGGGTGCTGACCACCCAGATGTGGCCAAGCAGCT 1004
|||||.||||||||.|||.||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||
Sbjct 1333 CCCCTCTGCCAGCGTGCTCTGGAGATCCGTGAGAAGGTCCTGGGTGCAGACCACCCTGATGTGGCCAAGCAGCT 1406
Query 1005 CAACAACCTGGCCCTGCTGTGCCAGAACCAGGGCAAGTTTGAGGACGTGGAGCGGCACTATGCCCGGGCCCTGA 1078
|||||||||||||||.||||||||||||||||||||||||.||||||||||||||||||||||.||||||||||
Sbjct 1407 CAACAACCTGGCCCTACTGTGCCAGAACCAGGGCAAGTTTCAGGACGTGGAGCGGCACTATGCGCGGGCCCTGA 1480
Query 1079 GCATCTATGAGGCACTGGGCGGGCCCCATGACCCCAACGTGGCCAAGACCAAGAACAACCTGGCCTCAGCCTAC 1152
|||||||.|||||.|||||||||||.||.|||||.||.|||||||||||.||||||||||||||||||||||||
Sbjct 1481 GCATCTACGAGGCCCTGGGCGGGCCACAGGACCCAAATGTGGCCAAGACTAAGAACAACCTGGCCTCAGCCTAC 1554
Query 1153 CTGAAACAGAACAAGTATCAACAAGCGGAAGAGCTGTACAAAGAAATCCTCCACAAGGAGGACCTACCCGCCCC 1226
||||||||||||||||||||.||.||.||.|||||.|||||.||.||||||..|.||||||.|||.||||||||
Sbjct 1555 CTGAAACAGAACAAGTATCAGCAGGCAGAGGAGCTATACAAGGAGATCCTCAGCCAGGAGGCCCTGCCCGCCCC 1628
Query 1227 TCTCGGTGCCCCCAACACAGGCACAGCTGGTG--ACGCAGAA-------------------------------- 1266
.||.||.||||||.|...|||||||||.||.| ||.|||.|
Sbjct 1629 ACTTGGAGCCCCCCAGGGAGGCACAGCAGGCGATACACAGCAGCAGGTAAGCAGGCTCCACCTCAGGTCCTTGT 1702
Query 1267 ----------------------------------------CAGGCCCTTCGCCGCAGCAGCTCACTCTCCAAGA 1300
||||.|||.|||.|.|||||.||..||||.|||.
Sbjct 1703 TGGGCCCCCACCATGTCCCCACACATCACTGTGCCCTCCCCAGGTCCTGCGCAGGAGCAGTTCCTTCTCTAAGC 1776
Query 1301 TCCGTGAGTCTATCAGGCGAGGAAGTGAGAAGCTGGTCTCCCGGCTCCGAGGCGAGG----------------C 1358
||||.||.||.||||||||||||||.|||||||||||||||||.||||||||.|||| |
Sbjct 1777 TCCGGGAATCCATCAGGCGAGGAAGCGAGAAGCTGGTCTCCCGCCTCCGAGGAGAGGGCATGGCAGGGGCTGCC 1850
Query 1359 GG--------CGG------------------CAGGAGC-------------------AGCC--GGA-------- 1377
|| ||| |||||.| |||| |||
Sbjct 1851 GGGTGAGTGCCGGGAGAGGTCAGCAGTCTGTCAGGAACCATCCGTGACATCAGTCAGAGCCAGGGATCTGCAGT 1924
Query 1378 -----------------------------------------ATGAAGAGAGCCATGTCACTCAACACACTGAAC 1410
|||||||||||||||||||||||.|..||||||
Sbjct 1925 CTTCCCTGTCTCACTCCTGTCTTTTTGGGCTCCTCTTCAGGATGAAGAGAGCCATGTCACTCAATATGCTGAAC 1998
Query 1411 GTGGATGCTCCAAGGGCTCCTGGGACTCAGTTTCCCAGCTGGCACCTGGACAAGGCCCCTCGGACCCTCAGCGC 1484
|||||||.|||.||||||.|..||||.|||.| ||..|| ||||
Sbjct 1999 GTGGATGGTCCCAGGGCTGCCCGGACGCAGGT----------------GAGGAG-------------TCAG--- 2040
Query 1485 CAGCACCCAGGACCTGAGCCCCCAC 1509
Sbjct 2041 ------------------------- 2040
