Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13298
- Subject:
- NR_110612.1
- Aligned Length:
- 2808
- Identities:
- 275
- Gaps:
- 2532
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCTAGAGATACCGCCTGGAGGCCACTGATCTGTAAAAGGGATCTCTACAGAAGATAGGGATTTTTGATCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGAGAAGAAGGGATATGTGAGATCCAAACGCCGAAGGAGGAAAGCAGGCTCCGTGGTCTCTTCCAGCCCTGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAGAAACTACCGAGCCTTATTATACTAGGTGCTTTCCACATGCCTATTCATTTAATCCTCCAGCAACCTTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGAAGGGCCATCCCATTTTATATTTAAACAAACCTTAACTACTGACGCAAGGAGTCAAGGATCTAATCCCAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTCTGCCTGGTTCGCTGCAGATGGATGTCCGCGAGGACGCCAGCCCTCCGCCTCCCGCCGGGTCCCTGAACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCGGCCCGGCCGGTCCAACCTCATTCCGCTTCCCGCCATCGAAACGCGAAGCCCCCGCCTTCCCCCAAACGTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGCGCCGCTGGGGCCTTTCTGGCTGCGCCGCCTCCGACCCCAGGCCCCGGTCCGCGCCCGCCGCTCGCTAGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGGGAGTGAGGAGAACGCGTGCTGAGGACCCGGCCAGAGGGACAGCGGGGACCGCCCTCCCGCTGCGTCTCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGCGAGGCCGTTCCTCCCGCGTCCGACCCCCGCGGGGCCGTCAGGTTCGGGGCGGCCCAGGCTGCGGGTCCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGGGCGCTTCGGGCCGAGCCGGCGCGGCGCGTGAAGGGCAGGGGACGCCCCGAAAGACCGCTGGGGTGGGACC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCAAGCTCCAGGGGTCTTTGGAAATAAGAATGCGGCGTGACGTTGGCTGTGCGGGCGCGGGGCTGACGCGGACC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTATAACCCATCGCCGAAACCGGGCGGCCGCGCCCCTATTCCTCGGCATTTCTCTCTGTCCGCGGCCCTGCTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCAATCAGCGAGTGGGCTCCTAGGCAGGTCCTGAGTGACAGCGCGGCGGGCTGGATCAGGAGATGCGCGTGCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGGCCCGGCCCGGCTGATCGCTTCGGGTGCTCGACTCCTGTTGCGCATGCTCAGCGCGCTGCCCGGCTGGGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCGCGCACCTGCAGCGCCCGCTGCTCGGCCCTGCATCCTGCCTGGGCATCCTGCGCCCGGCCATGACGGCGCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCATTCGCCCTCCCGGTCATCATCTTCACCACGTTCTGGGGCCTCGTCGGCATCGCCGGGCCCTGGTTCGTGCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGGGACCCAACCGCGGAGTGATCATCACCATGCTGGTCGCCACCGCCGTCTGCTGTTACCTCTTCTGGCTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCGCCATCCTGGCGCAGCTGAACCCCCTGTTCGGGCCCCAGCTGAAGAATGAGACCATCTGGTACGTGCGCTTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTGTGGGAGTGACCCGCCGCCCCCGACCCAGCGCTTCACCCCAAGGCAAGACCCTAACCTGGGCCCTAACCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGGAGGGAGGGAAAGGGTGCCCAGCTCTCGGAATGACTGTGGCTCCACTGTCCCTGACAACCCCTTCGTCCGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCCTCCCCCACACAACTATGTCTGGTCACCAGCTCCCTCCTGCTGGCACCCAGAGACCCGGACCCGCAGGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGCCTGGTTCCTGGAAGTCTTCCCAGTCTTCCCAGCCAGCCCGGGCCCTGGGGAGCCCTGGGCACAGCAGCGGC 1628
Query 1 -------ATGTCCTGCTCCAATACCCGCACTGCTCTGGAGTTTGCCCTCTTTCCCAAGGAGATGCTGCTGGGGA 67
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CGAGGGGATGTCCTGCTCCAATACCCGCACTGCTCTGGAGTTTGCCCTCTTTCCCAAGGAGATGCTGCTGGGGA 1702
Query 68 GCTGGTATGGGTGGGGTCTTTCCCTTTACAGACGGGGCAGATGCCAGGACTCAGCCCATCCTGAGGAGGACACG 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCTGGTATGGGTGGGGTCTTTCCCTTTACAGACGGGGCAGATGCCAGGACTCAGCCCATCCTGAGGAGGACACG 1776
Query 142 TGTCCTCATGGAGAGGGTGCTCCGGCCCAGGCGGGGGAGTCGGTGCCCAGTCAGCAGCTCTGCCACCATCCTGC 215
|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1777 TGTCCTCATGGAGAGGGTGCTCCGGCCCAGGCGGGGGAGTCAGTGCCCAGTCAGCAGCTCTGCCACCATCCTGC 1850
Query 216 TGGGAACTGGGGGGGCCTCTATTGGGTTATAGGCAAGGCCTTTTCTCTGGCATGGAATTGT------------- 276
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGGGAACTGGGGGGGCCTCTATTGGGTTATAGGCAAGGCCTTTTCTCTGGCATGGAATTGTTAATTTTCTGACA 1924
Query 277 -------------------------------------------------------------------------- 276
Sbjct 1925 CGTCTAGATGTGAAATTTCTGAAAATGTTGAAGCAGAGAAACATTCACACACAAAAAGCAACATAGTCATGTGG 1998
Query 277 -------------------------------------------------------------------------- 276
Sbjct 1999 GTCCAGATGGCCTCAGTCCTAGATGTTGGCACCCTTTGCTGTGTCTCCTCAGAGTATCCTGTTCCGCCTCCTGC 2072
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2073 CACCTGGACCTCCCTCAGTGGATGTCTTCCCTCCCCCGACCCCAGCCTGTCAGTCCGAGCACAGTGCAGGTTTG 2146
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2147 GCTCTGACTTGGGCTTTTGGCTGCAGTGGGGGTGGATTTCAGAGCCTCTCATGGCAGCATCTAAGTGACCAGAG 2220
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2221 CTGGGATGAGAGAGGGGAAGGGGCAATGTGAGTGGCGCTATGGGACGGGCCAGCCCTGCTCCTGAGCCAGCCCC 2294
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2295 GCCCTCTGCCCCCTGGCCCTGGGCTCTGTGCTAGGGATGGTGAAGAATGGGGGCGTGCCAGCCTGGCAGGAGTG 2368
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2369 GGAAGCAACACGCAGGGGTCCCGGACCTCTCCAGCCTTGCCCTCACGCTTACCCGAGCTCCCAGTGTGGTTAGC 2442
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2443 ACAGAGCTCACCCACCTTGCCTGGCTCCCAGCTGGGGCCTGTCCTCACTGGTGCTCCAGGGGAAGAAACGACAG 2516
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2517 CCTCACTTCTGTATGGACTGCTGATGTGGCCTGCCATCCTGTTCAGCGGGCATTGTCTTTGGAGCAGCAGGAGA 2590
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2591 ATAGGATGCCTCTCACTCACATGCCAGTTCCTGGCTGGCCAGCTGCTCAGGGCTCAGGCTGGGGCCTCCCATTG 2664
Query 277 -------------------------------------------------------------------------- 276
Sbjct 2665 ACATCCTCCCCCTACACTCCCTCTCTGAGCCTCCGTCGCCCCTCCTGTTGGGTAAGGGTGTTGAGTGTGACTTG 2738
Query 277 ---------------------------------------------------------------------- 276
Sbjct 2739 TGCTGAAAACCTGGTTCATATATAATAAATAATGGTGATGAAAAGATTACTGTTTGGTGACAAAAAAAAA 2808
