Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13369
- Subject:
- NM_144982.5
- Aligned Length:
- 5972
- Identities:
- 1054
- Gaps:
- 4903
Alignment
Query 1 ATGGCGACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGATGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACCGCAGATACTCCGGCCCCGGCCTCCAGTGGCCTCTCGCCGAAGGAAGAAGGGGAGCTTGAAGATGG 74
Query 75 GGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGCTGT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGAAATCAGTGACGACGATAATAACAGCCAGATACGGAGTCGGAGCAGCAGCAGCAGCAGCGGCGGCGGGCTGT 148
Query 149 TACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGAGGCGGTGGCTCTTCCTCG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACCCTATCCGCGGCGAAGGCCTCCTCACTCGGCCCGGGGCGGTGGATCTGGCGGAGGCGGTGGCTCTTCCTCG 222
Query 223 TCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCACCTCAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCATCGTCCTCTTCTCAGCAGCAGCTGAGGAATTTCTCACGCTCGCGGCACGCGTCTGAGCGGGGCCACCTCAG 296
Query 297 GGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGAGCTCAC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGACCCAGCAGCTACCGACCCAAAGAACCGTTCCGGTCTCATCCGCCTTCTGTACGGATGCCTTCGAGCTCAC 370
Query 371 TGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTTCGAGGC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCCGAAAGCAGTCCCCGGCCGTCTTTCTGGGAGCGGAGCCACCTCGCCTTGGACCGTTTCCGCTTTCGAGGC 444
Query 445 AGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGCCTTACCGGGGTGGGAGTCGCTGGAGTCGGGGGCGAGGAGTGGGTGAGCGAGGAGGCAAGCCGGGGTGCAG 518
Query 519 ACCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAGAGCCCTCTCCACCTCGGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACCTCCTCTGGGAGGAGGAGCAGGATCCGGGTTCAGCAGCAGTCAGAGCTGGCGAGAGCCCTCTCCACCTCGGA 592
Query 593 AGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAAAATGAAAACTGTGTGGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGAGCTCCAAAAGTTTTGGAAGGTCTCCATCAAGAAAACAAAATTATTCATCAAAAAATGAAAACTGTGTGGAA 666
Query 667 GAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATGCATCAATAAGGATGAAAA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAACTTTTGAAGATTTGCTTTTAAAGTATAAACAAATACAGTTGGAACTAGAATGCATCAATAAGGATGAAAA 740
Query 741 ACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACTTCGAGGACCAAACTAGCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACTAGCATTGAGTAGCAAAGAAGAGAATGTGCAGGAAGATCCTAAAACATTGAACTTCGAGGACCAAACTAGCA 814
Query 815 CTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAAACACAAGTCAAAACTTTT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTGATAATGTCAGTATTACAAAGGATTCAAGTAAAGAAGTAGCTCCTGAGGAGAAAACACAAGTCAAAACTTTT 888
Query 889 CAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAACCGTTTGAAAAAAGTTAA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAGGCATTTGAATTAAAACCACTCAGGCAAAAATTGACTTTACCAGGAGATAAGAACCGTTTGAAAAAAGTTAA 962
Query 963 AGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGGTATCCCTTATCGGGTAAAG- 1035
|||||||||||||||||||||||||||||||||||||||||||||||||||||| .|||...|.|||||
Sbjct 963 AGATGGAGCAAAACCACTTTCCCTGAAATCCGACACTACTGATTCTAGTCAAGG-----ATTACAAGATAAAGA 1031
Query 1036 --------------GAGGGTTT--TACTCC---TATT---------------CCTGGT----TTGAA------- 1064
||.|..|| |||..| |||| |.|||| .||||
Sbjct 1032 ACAAAATTTAACAAGAAGAATTAGTACCTCAGATATTCTGTCTGAAAAGAAACTTGGTGAAGATGAAGAGGAAC 1105
Query 1065 ------ATTTTCAGCG---------------------------------------------------------- 1074
|.||.||||.
Sbjct 1106 TATCTGAATTACAGCTTCGCCTTTTGGCTCTTCAGTCAGCCAGTAAAAAATGGCAACAAAAAGAACAGCAGGTG 1179
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1180 ATGAAAGAAAGCAAAGAAAAGTTGACTAAGACGAAAACTGTACAGCAAAAAGTTAAAACAAGTACAAAAACACA 1253
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1254 TTCGGCCAAAAAAGTTAGCACTACAGCTAAACAAGCATTGAGGAAGCAGCAAACAAAGGCATGGAAGAAACTAC 1327
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1328 AACAACAAAAAGAGCAGGAAAGACAGAAAGAAGAGGATCAGCGGAAACAAGCTGAAGAAGAAGAGAGAAGGAAA 1401
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1402 AGAGAGGAAGAAATCAGAAAAATTCGAGATCTCTCAAATCAGGAAGAACAGTACAATCGATTCATGAAATTGGT 1475
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1476 TGGTGGCAAGAGGAGATCAAGAAGTAAATCTTCAGATCCTGACCTGAGGCGATCCTTAGATAAGCAACCTACTG 1549
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1550 ATAGTGGAGGAGGCATTTATCAGTATGATAACTATGAAGAAGTTGCTATGGATACAGATAGTGAAACCAGTTCT 1623
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1624 CCAGCTCCTTCACCAGTGCAACCGCCATTTTTCTCTGAATGTTCATTGGGGTATTTTTCTCCAGCACCATCTCT 1697
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1698 TTCTTTGCCTCCACCACCTCAGGTTTCTTCTCTGCCACCTTTGAGCCAGCCTTATGTGGAAGGCTTGTGTGTTT 1771
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1772 CTCTTGAACCTCTACCTCCTCTACCACCATTACCACCTCTCCCACCTGAAGATCCAGAACAGCCTCCAAAACCA 1845
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1846 CCTTTTGCAGATGAGGAAGAGGAGGAAGAAATGCTGCTTCGAGAAGAACTACTTAAATCTCTAGCAAATAAAAG 1919
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1920 AGCTTTTAAGCCAGAGGAAACATCCAGTAATAGTGACCCACCTTCACCTCCAGTTCTGAACAATTCACATCCTG 1993
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 1994 TGCCAAGAAGCAATCTATCAATAGTCAGTATTAACACAGTGTCTCAGCCTAGGATACAGAATCCAAAGTTTCAC 2067
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2068 AGAGGACCCCGTCTTCCACGAACTGTGATCTCGCTTCCAAAGCATAAATCAGTGGTTGTAACACTAAATGATTC 2141
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2142 AGATGATAGTGAATCTGATGGAGAGGCTTCCAAGTCAACAAATAGTGTTTTTGGTGGATTAGAGTCCATGATTA 2215
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2216 AAGAAGCAAGACGAACTGCTGAGCAAGCTTCAAAACCGAAAGTACCTCCAAAATCTGAAAAAGAAAATGATCCT 2289
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2290 CTGCGAACACCGGAGGCTTTGCCTGAAGAAAAGAAGATTGAATATAGATTGTTAAAGGAAGAGATTGCCAACCG 2363
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2364 TGAGAAACAGCGTTTGATTAAATCAGATCAGCTGAAGACAAGTTCATCATCCCCAGCAAACTCTGATGTGGAAA 2437
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2438 TTGATGGTATTGGCAGGATAGCAATGGTTACTAAGCAGGTTACAGATGCAGAATCAAAACTGAAAAAACATAGG 2511
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2512 ATTCTCTTGATGAAAGATGAATCTGTTTTAAAGAATTTAGTGCAACAAGAAGCTAAGAAGAAAGAATCTGTTAG 2585
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2586 AAATGCTGAAGCAAAGATTACAAAACTTACAGAACAGCTTCAAGCAACTGAAAAAATTCTTAATGTTAACAGAA 2659
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2660 TGTTTTTGAAGAAGCTTCAGGAACAAATTCACAGAGTTCAACAGCGTGTTACAATTAAGAAAGCTTTGACTCTA 2733
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2734 AAATATGGAGAAGAGCTTGCTCGGGCAAAGGCAGTGGCCAGTAAAGAAATAGGAAAACGTAAACTGGAACAAGA 2807
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2808 TCGCTTTGGGCCAAACAAAATGATGAGACTGGACAGTTCTCCAGTATCAAGTCCAAGAAAGCATTCAGCAGAAC 2881
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2882 TAATTGCTATGGAGAAAAGACGGTTACAAAAGCTAGAATATGAATATGCCCTGAAAATTCAAAAATTAAAAGAA 2955
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2956 GCCCGTGCCCTTAAAGCAAAGGAACAACAAAATATCTCTCCAGTTGTGGAAGAGGAACCCGAATTTTCTTTACC 3029
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3030 TCAACCCTCACTTCATGATCTGACACAAGATAAATTAACCCTGGACACTGAAGAAAATGATGTTGATGATGAAA 3103
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3104 TTTTGTCTGGTTCAAGCAGAGAGCGAAGAAGATCTTTTTTAGAATCCAATTATTTTACTAAACCTAACCTTAAG 3177
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3178 CACACTGATACTGCTAACAAAGAATGCATAAACAAACTTAATAAAAATACTGTAGAAAAACCAGAACTTTTTCT 3251
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3252 AGGGTTAAAAATTGGTGAATTGCAAAAATTGTATTCAAAAGCTGACAGCCTAAAACAGCTGATTTTAAAAACCA 3325
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3326 CCACAGGCATTACAGAGAAGGTTTTGCATGGTCAGGAGATTTCTGTAGATGTGGATTTTGTCACAGCACAAAGT 3399
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3400 AAAACAATGGAAGTGAAGCCATGTCCTTTTAGACCCTACCATAGTCCTCTTCTAGTTTTTAAGTCCTACAGATT 3473
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3474 TAGTCCATATTATCGAACCAAGGAAAAACTTCCCCTGAGCTCAGTATCATACAGTAATATGATTGAACCGGATC 3547
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3548 AGTGTTTCTGCCGTTTTGATTTAACAGGAACATGTAATGATGATGATTGTCAATGGCAGCATATACAAGACTAT 3621
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3622 ACACTTAGCCGAAAACAGTTATTCCAGGACATTCTGTCATATAATCTGTCTTTGATTGGTTGTGCAGAGACAAG 3695
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3696 TACTAATGAAGAAATTACTGCTTCAGCAGAAAAATATGTTGAGAAACTTTTTGGAGTAAACAAAGATCGAATGT 3769
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3770 CAATGGACCAGATGGCTGTTCTCCTTGTTAGCAATATCAATGAAAGTAAAGGTCATACTCCTCCATTTACAACC 3843
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3844 TACAAAGATAAAAGAAAGTGGAAGCCAAAGTTTTGGAGAAAACCTATTTCAGATAATAGCTTCAGTAGTGATGA 3917
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3918 GGAACAGTCTACAGGACCAATTAAGTATGCTTTCCAGCCAGAGAACCAAATAAATGTTCCAGCTCTGGATACAG 3991
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 3992 TTGTCACTCCAGATGATGTCAGATACTTTACAAATGAGACTGATGACATCGCTAATTTAGAAGCAAGTGTGCTT 4065
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4066 GAAAATCCTTCTCATGTACAACTTTGGCTCAAGCTTGCGTACAAGTACTTGAATCAAAATGAGGGGGAGTGCTC 4139
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4140 AGAATCCTTGGATTCTGCTTTAAATGTTCTGGCGCGAGCATTGGAAAATAACAAAGACAATCCAGAAATTTGGT 4213
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4214 GCCATTACCTCAGATTGTTCTCAAAAAGAGGAACCAAGGACGAGGTGCAGGAAATGTGTGAAACAGCTGTTGAA 4287
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4288 TATGCTCCAGATTATCAAAGCTTTTGGACTTTTCTACACCTAGAAAGTACCTTTGAAGAAAAGGATTACGTATG 4361
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4362 TGAGAGAATGTTGGAGTTTCTGATGGGAGCAGCCAAGCAGGAAACATCCAATATTTTGTCCTTTCAGCTTTTAG 4435
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4436 AGGCTCTTTTGTTTAGAGTTCAGCTGCACATATTTACTGGAAGATGCCAAAGTGCACTGGCAATTTTACAGAAT 4509
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4510 GCATTGAAATCTGCTAATGATGGAATAGTAGCTGAATACCTTAAAACCAGTGATCGATGTTTGGCATGGTTGGC 4583
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4584 CTACATACATCTTATTGAATTCAACATTCTCCCTTCAAAATTTTATGATCCATCTAATGATAATCCTTCAAGAA 4657
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4658 TTGTTAACACTGAATCATTTGTAATGCCATGGCAAGCTGTTCAAGATGTAAAGACTAATCCTGACATGTTGTTA 4731
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4732 GCAGTTTTTGAAGATGCAGTGAAAGCTTGCACAGATGAGAGCCTTGCTGTTGAGGAAAGAATAGAGGCCTGCCT 4805
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4806 TCCACTTTACACAAACATGATTGCTCTGCACCAACTCCTGGAGAGGTATGAGGCTGCAATGGAGCTTTGTAAAT 4879
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4880 CTTTATTGGAATCATGTCCTATTAACTGCCAGTTGCTGGAAGCTCTTGTTGCATTATATTTGCAAACAAATCAG 4953
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 4954 CATGACAAAGCCAGAGCAGTGTGGCTTACTGCATTTGAAAAAAATCCTCAGAATGCAGAGGTTTTTTATCATAT 5027
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5028 GTGCAAATTCTTCATCTTACAGAATCGAGGCGATAATCTTCTTCCATTTTTGCGGAAATTTATTGCATCCTTCT 5101
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5102 TTAAACCGGGGTTTGAGAAGTATAATAACTTGGATCTGTTTCGGTATCTCTTAAATATTCCAGGACCAATTGAC 5175
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5176 ATTCCATCTCGTTTATGTAAAGGGAATTTTGATGATGATATGTTTAACCACCAAGTTCCTTATTTGTGGCTGAT 5249
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5250 TTACTGCCTTTGTCATCCTCTTCAATCAAGTATTAAAGAAACAGTGGAGGCATATGAGGCAGCATTAGGGGTGG 5323
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5324 CTATGAGATGTGATATAGTACAGAAGATATGGATGGATTATCTTGTCTTTGCAAATAATAGAGCTGCTGGATCC 5397
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5398 AGAAACAAAGTTCAAGAATTCAAATTTTTTACTGATTTAGTGAATAGATGTTTGGTTACAGTCCCTGCCCGATA 5471
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5472 CCCCATTCCTTTTAGCAGTGCTGATTACTGGTCCAACTATGAATTTCATAATAGGGTTATTTTCTTTTATTTGA 5545
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5546 GCTGTGTTCCAAAGACCCAGCATTCCAAAACCTTGGAACGGTTTTGTTCAGTTATGCCAGCTAATTCTGGACTT 5619
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5620 GCATTGAGGTTACTTCAACATGAATGGGAAGAAAGCAATGTTCAGATTCTGAAACTTCAAGCCAAGATGTTTAC 5693
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5694 ATATAATATCCCAACATGCCTGGCCACCTGGAAAATAGCCATTGCTGCTGAGATTGTTCTAAAGGGACAAAGAG 5767
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5768 AGGTCCACCGTTTATATCAGAGAGCCTTACAGAAGTTACCTCTTTGTGCATCACTGTGGAAAGATCAACTCTTG 5841
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 5842 TTTGAAGCATCAGAAGGAGGTAAAACTGATAACCTGAGAAAACTAGTTTCCAAGTGCCAAGAGATTGGAGTCAG 5915
Query 1075 ---------------------------------------------------- 1074
Sbjct 5916 CCTAAATGAGCTCTTAAATTTAAACAGTAACAAAACAGAAAGCAAGAATCAC 5967
