Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13426
- Subject:
- XM_006524393.3
- Aligned Length:
- 2451
- Identities:
- 1408
- Gaps:
- 783
Alignment
Query 1 ATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCACCAACAAGGGATTTATTC 74
||||||||||||||.||||||||.|||||.||||||||||||.|.||.||||||||.||.|||||||||||.||
Sbjct 1 ATGGTGAAGCAGACGATCCAGATTTTCGCTAGGGTGAAGCCCACCGTGCGGAAGCAGCAGCAAGGGATTTACTC 74
Query 75 CATAGATGAAGATGAAAAATTAATACCTAGCTTGGAAATCATCTTACCACGTGATTTGGCAGATGGGTTTGTGA 148
|||||||||||||||||||||||..|.||||||||||||..|||||||.||.||..||||||||||.||.||.|
Sbjct 75 CATAGATGAAGATGAAAAATTAACGCATAGCTTGGAAATTGTCTTACCCCGAGACCTGGCAGATGGATTCGTAA 148
Query 149 ATAATAAGCGAGAAAGCTACAAATTTAAATTTCAAAGAATTTTTGATCAGGATGCAAACCAAGAGACCGTTTTT 222
|.||.||.||||||||||||||.|||||.||||||||.||||||||.||.||.||.||.|||||||.|.||||.
Sbjct 149 ACAACAAACGAGAAAGCTACAAGTTTAAGTTTCAAAGGATTTTTGACCAAGAGGCTAAGCAAGAGATCATTTTC 222
Query 223 GAAAACATTGCCAAACCAGTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACCATCTTTGCATATGGGCAAAC 296
||.|.|||||||||||||||.||.|.||||..|.||||||||||||||||.||||||||.|||||||||||.||
Sbjct 223 GAGATCATTGCCAAACCAGTCGCCGAGAGTACCTTGGCAGGTTACAATGGCACCATCTTCGCATATGGGCAGAC 296
Query 297 AGGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACAC 370
.|||||.||.|||||||||||.||||||||.||.||||||||.|||||||||||||||||.|||||||||||.|
Sbjct 297 GGGCAGTGGCAAGACATTCACCATCACAGGCGGGGCAGAGCGCTACAGTGACAGAGGCATCATCCCAAGGACCC 370
Query 371 TGTCATACATTTTTGAACAGTTACAAAAGGACAGCAGCAAAATATATACAACACACATTTCCTATTTGGAAATC 444
||||.|||||||||||.|||||.|||||||||||||||||.||.||.||.|||||||||||.||.|||||||||
Sbjct 371 TGTCGTACATTTTTGAGCAGTTGCAAAAGGACAGCAGCAAGATCTACACGACACACATTTCTTACTTGGAAATC 444
Query 445 TACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGAC 518
|||||.||||||||.|||||.||..|||||||.|||||.||||||||||...||||||||.|||||||||||||
Sbjct 445 TACAACGAATGTGGCTATGACCTGCTGGATCCCAGACACGAAGCCTCCAAACTGGAAGATCTGCCGAAAGTGAC 518
Query 519 AATACTGGAGGATCCTGATCAGAACATTCACCTGAAAAACTTGACTCTCCATCAGGCAACCACAGAGGAAGAAG 592
||||.|||||||.|||||||||||||||||||||||||||.||.||||.|||||||||||.||.|||||.||||
Sbjct 519 AATATTGGAGGACCCTGATCAGAACATTCACCTGAAAAACCTGTCTCTGCATCAGGCAACAACTGAGGAGGAAG 592
Query 593 CTCTGAATTTGCTTTTTTTAGGAGACACCAACCGAATGATTGCAGAGACTCCTATGAACCAAGCTTCAACCCGT 666
|||||||..||||.||.||.||.|||||||||.|.|||||.||.||||||||||||||.||||||||||||||.
Sbjct 593 CTCTGAACCTGCTCTTCTTGGGGGACACCAACAGGATGATCGCTGAGACTCCTATGAATCAAGCTTCAACCCGG 666
Query 667 TCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCA 740
||.|||||.||||||||..|.||.|||...||||||||.|||||.|||||.||.||.||||||||.||.|||||
Sbjct 667 TCACACTGTATTTTCACTGTGCACTTGAGCAGCAAGGAGCCAGGTTCTGCCACCGTCCGACATGCTAAGCTCCA 740
Query 741 TCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGT 814
|||||||||||||||.||.||||||||.||..|.|||||||||||.|||||||..|||||.|||||||||||.|
Sbjct 741 TCTGGTTGACCTGGCAGGGTCAGAGCGTGTCTCGAAGACTGGAGTCGGGGGCCTGCTTCTGACAGAGGCCAAAT 814
Query 815 ATATCAACTTGTCACTACATTACTTAGAACAGGTTATCATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCCT 888
|.|||||||||||.|||||.|||.|.||.|||||.||||||||||||||.|||||.||||||.|.|||||.|||
Sbjct 815 ACATCAACTTGTCCCTACACTACCTGGAGCAGGTCATCATTGCCCTTTCGGAAAAACACCGTACACACATCCCT 888
Query 889 TATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGACAACTATGATTGCAAC 962
||.||.|||||||||||||||||.||.||.|||||||||.|||||||||||||||||||.||.|||||||||||
Sbjct 889 TACAGGAACTCCATGATGACCAGCGTGCTCAGAGACAGTCTGGGAGGGAACTGCATGACCACCATGATTGCAAC 962
Query 963 ACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCTATATCAACCTGCAGATTTGCACAGCGAGTGGCACTCATAA 1036
.||.||.||||||||.|||||..|||||||||||||.||.||||||||||||||.|||||||||||.||.||.|
Sbjct 963 CCTGTCTTTGGAGAAGAGGAACATTGATGAGTCTATCTCCACCTGCAGATTTGCTCAGCGAGTGGCCCTAATTA 1036
Query 1037 AGAATGAAGCTGTTCTTAATGAAGAAATTAACCCCAGATTAGTGATTAAACGCCTACAAAAGGAAATCCAGGAA 1110
|.||.|||||..||||.||.|||||.|||.|.|||||..|..|||||...|||.|.||||||||.||..|.||.
Sbjct 1037 AAAACGAAGCCATTCTCAACGAAGAGATTGATCCCAGGCTGATGATTGTTCGCTTGCAAAAGGAGATTGAAGAC 1110
Query 1111 CTGAAGGATGAACTGGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCT 1184
.||||||..||..|||||||||.|||.||.|||||||||||||||||.|||||.||||||||||||||||||.|
Sbjct 1111 TTGAAGGCAGAGTTGGCCATGGCCACAGGAGAGCAGAGGACAGAGGCCCTCACGGAAGCAGAGCTCCTTCAGTT 1184
Query 1185 GGAAAAACTAATAACATCCTTTTTGGAAGACCAGGATTCAGACAGTAGATTAGAGGTTGGCGCGGATATGCGTA 1258
|||||||||||||.||||||.||||||||||||.|||.||||.|||.||.|.||.||||||||.||||||||||
Sbjct 1185 GGAAAAACTAATAGCATCCTATTTGGAAGACCAAGATCCAGAGAGTCGACTGGAAGTTGGCGCTGATATGCGTA 1258
Query 1259 AAGTTCATCACTGTTTTCATCATTTAAAGAAACTATTGAATGACAAGAAGATCCTTGAAAACAATACAGTCTCC 1332
||.|.||||||||||||||||||||.|||||.||.||||||||||||||||.||| |.|.|||||.||||||
Sbjct 1259 AAATCCATCACTGTTTTCATCATTTTAAGAAGCTGTTGAATGACAAGAAGACCCT---AGAGAATACTGTCTCC 1329
Query 1333 TCTGAAAGCAAAGACCAAGATTGTCAAGAACCATTAAAAGAAGAAGAATATAGAAAGCTACGAGATATTCTGAA 1406
||||||||||.|...||||..||.|||||||||||.|.|||.||||||||||.||||||.|.||.|.||||.||
Sbjct 1330 TCTGAAAGCACACGGCAAGCATGCCAAGAACCATTGAGAGATGAAGAATATACAAAGCTCCTAGGTCTTCTCAA 1403
Query 1407 ACAGAGAGATAACGAAATCAGTATCCT-----TTCTG------AAGTG--ATGAAGAAA--------------- 1452
.|||||.||.|||||.||||.|||||| .|.|| ||| | |.|||||||
Sbjct 1404 GCAGAGGGACAACGAGATCAATATCCTGGTCAATATGTTAAAAAAG-GAAAAGAAGAAAACTCAGGATGCCCTC 1476
Query 1453 --------------------------------------------------CTTCCTC----------------- 1459
||||.||
Sbjct 1477 CAGAATTCAAGCCTAGAGAAAAGCGATACCAGGCCACCTCAGAACTCGCCCTTCATCGCTGGGAGCCCAGCGGT 1550
Query 1460 --------------TATCCT-----------------------------------------------GGTTTG- 1471
|.|||| .|.|||
Sbjct 1551 CCCAAGGACCCCATTCTCCTCAGCCCCGAGCCACACCCAGGACCTCAGCATCTGCAGGCACAGATCCAGCTTGC 1624
Query 1472 ---------AAAGGGGAATGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGAC 1536
|||..||.|||||||||||.||||||.|.|||.||||||||||||||||.||.||||||||||||
Sbjct 1625 TCCACAAAAAAACAGGGATGAGAGAGGAGATGTCACTGGGACGCCAGGAGGCTTTTGAGATTTTCAAGAGGGAC 1698
Query 1537 CACGCTGACAGCGTTACCATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTGGG 1610
|||||||||||.||.||||||||.||||||||||||.|||||||.|||||||||||||||||.||.||.|||||
Sbjct 1699 CACGCTGACAGTGTCACCATCGAGGACAACAAACAGGTTCTGAAGCAGAGATTTTCTGAAGCAAAAGCTCTGGG 1772
Query 1611 AGAAAGTATAAATGAAGCAAGAAGTAAAATTGG---TCACCTGAA--------GGAAGAAATCACCCAGCGGCA 1673
||||||||||||||||||||||||||||||||| .|||.|..| ||.|||| ||||
Sbjct 1773 AGAAAGTATAAATGAAGCAAGAAGTAAAATTGGAAAACACTTTCAGGTCGTTCGGGAGAA----------GGCA 1836
Query 1674 TATACAGCAAGTAGCCCTAGGAATCTCGGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGC 1747
.|| |||..|
Sbjct 1837 GAT---GCATTT-------------------------------------------------------------- 1845
Query 1748 TGCGATCACAACTGGAGGAAGAAAAGAGAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAG 1821
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 1822 ATCGAGCACTTGCAGCTGCTCATGGACAAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGA 1895
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 1896 GGAGGCCACCAACCTGCAGGTAAATTCTCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACAT 1969
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 1970 CTGACTCCCAGCATGAACGGTCCCAACTCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGC 2043
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 2044 ACTGGCAGATTCGATGTCTGTGATGTGAATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCA 2117
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 2118 GAAACAGAGCAGCACCAGCACCCCACTGGAAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCG 2191
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 2192 GAGACAGCCAGACGGACTCGGACATCATCGCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATGTTTG 2265
Sbjct 1846 -------------------------------------------------------------------------- 1845
Query 2266 GGAAGCAAT 2274
Sbjct 1846 --------- 1845
