Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13426
- Subject:
- XM_011514361.2
- Aligned Length:
- 2276
- Identities:
- 1233
- Gaps:
- 1036
Alignment
Query 1 ATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCACCAACAAGGGATTTATTC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTGAAGCAGACTATCCAGATATTCGCGAGGGTGAAGCCCCCTGTCCGGAAGCACCAACAAGGGATTTATTC 74
Query 75 CATAGATGAAGATGAAAAATTAATACCTAGCTTGGAAATCATCTTACCACGTGATTTGGCAGATGGGTTTGTGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATAGATGAAGATGAAAAATTAATACCTAGCTTGGAAATCATCTTACCACGTGATTTGGCAGATGGGTTTGTGA 148
Query 149 ATAATAAGCGAGAAAGCTACAAATTTAAATTTCAAAGAATTTTTGATCAGGATGCAAACCAAGAGACCGTTTTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAATAAGCGAGAAAGCTACAAATTTAAATTTCAAAGAATTTTTGATCAGGATGCAAACCAAGAGACCGTTTTT 222
Query 223 GAAAACATTGCCAAACCAGTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACCATCTTTGCATATGGGCAAAC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAAAACATTGCCAAACCAGTTGCTGGGAGTGTCCTGGCAGGTTACAATGGTACCATCTTTGCATATGGGCAAAC 296
Query 297 AGGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACAC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGCAGCGGGAAGACATTCACTATCACAGGGGGTGCAGAGCGTTACAGTGACAGAGGCATTATCCCAAGGACAC 370
Query 371 TGTCATACATTTTTGAACAGTTACAAAAGGACAGCAGCAAAATATATACAACACACATTTCCTATTTGGAAATC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTCATACATTTTTGAACAGTTACAAAAGGACAGCAGCAAAATATATACAACACACATTTCCTATTTGGAAATC 444
Query 445 TACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGAC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACAATGAATGTGGTTATGATCTTTTGGATCCAAGACATGAAGCCTCCAGTTTGGAAGATTTGCCGAAAGTGAC 518
Query 519 AATACTGGAGGATCCTGATCAGAACATTCACCTGAAAAACTTGACTCTCCATCAGGCAACCACAGAGGAAGAAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AATACTGGAGGATCCTGATCAGAACATTCACCTGAAAAACTTGACTCTCCATCAGGCAACCACAGAGGAAGAAG 592
Query 593 CTCTGAATTTGCTTTTTTTAGGAGACACCAACCGAATGATTGCAGAGACTCCTATGAACCAAGCTTCAACCCGT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTGAATTTGCTTTTTTTAGGAGACACCAACCGAATGATTGCAGAGACTCCTATGAACCAAGCTTCAACCCGT 666
Query 667 TCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCCACTGCATTTTCACCATTCATTTGTCAAGCAAGGAACCAGGATCTGCAACTGTACGACATGCCAAACTCCA 740
Query 741 TCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTGGTTGACCTGGCTGGTTCAGAGCGAGTTGCAAAGACTGGAGTAGGGGGCCATCTTCTAACAGAGGCCAAGT 814
Query 815 ATATCAACTTGTCACTACATTACTTAGAACAGGTTATCATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCCT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATATCAACTTGTCACTACATTACTTAGAACAGGTTATCATTGCCCTTTCAGAAAAGCACCGTTCGCACATTCCT 888
Query 889 TATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGACAACTATGATTGCAAC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TATAGAAACTCCATGATGACCAGTGTCCTAAGAGACAGTTTGGGAGGGAACTGCATGACAACTATGATTGCAAC 962
Query 963 ACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCTATATCAACCTGCAGATTTGCACAGCGAGTGGCACTCATAA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACTCTCCTTGGAGAAAAGGAATCTTGATGAGTCTATATCAACCTGCAGATTTGCACAGCGAGTGGCACTCATAA 1036
Query 1037 AGAATGAAGCTGTTCTTAATGAAGAAATTAACCCCAGATTAGTGATTAAACGCCTACAAAAGGAAATCCAGGAA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAATGAAGCTGTTCTTAATGAAGAAATTAACCCCAGATTAGTGATTAAACGCCTACAAAAGGAAATCCAGGAA 1110
Query 1111 CTGAAGGATGAACTGGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAGCTCCTTCAGCT 1184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTGAAGGATGAACTGGCCATGGTCACTGGGGAGCAGAGGACAGAGGCACTCACAGAAGCAGAGCTCCTTCA--- 1181
Query 1185 GGAAAAACTAATAACATCCTTTTTGGAAGACCAGGATTCAGACAGTAGATTAGAGGTTGGCGCGGATATGCGTA 1258
|||| |||||.|
Sbjct 1182 -------------------TTTT------------------------------------------ATATGGG-- 1192
Query 1259 AAGTTCATCACTGTTTTC-ATCATTTAAAGAAACTATTGAATGACAAGAAGATCCTTGAAAACAATACAGTCTC 1331
||| |.||.||||||||| |.|| ||||
Sbjct 1193 ---------------TTCTACCACTTAAAGAAA------------------ACCC-----------ACAG---- 1218
Query 1332 CTCTGAAAGCAAAGACCAAGAT-TGTCAAGAACCATTAAAAGAAGAAGAATATAGAAAGCTACGAGATATTCTG 1404
|.||||| || || ||.| |||.||||
Sbjct 1219 -TGTGAAA------------ATGTG--------CACT-------------TATGGAAA---------------- 1242
Query 1405 AAACAGAGAGATAACGAAATCAGTATCCTTTCTGAAGTGATGAAGAAACTTCCTCTATCCTGGTTTGAAAGGGG 1478
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1479 AATGAGAGAGGAAATGTCATTAGGATGCCAGGAGGCTTTTGAAATCTTCAAGAGGGACCACGCTGACAGCGTTA 1552
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1553 CCATCGATGACAACAAACAGATTCTGAAACAGAGATTTTCTGAAGCCAAGGCCCTGGGAGAAAGTATAAATGAA 1626
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1627 GCAAGAAGTAAAATTGGTCACCTGAAGGAAGAAATCACCCAGCGGCATATACAGCAAGTAGCCCTAGGAATCTC 1700
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1701 GGAAAACATGGCCGTGCCTCTGATGCCAGACCAGCAGGAGGAGAAGCTGCGATCACAACTGGAGGAAGAAAAGA 1774
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1775 GAAGGTATAAAACAATGTTCACTCGCCTGAAAGCCCTGAAGGTGGAGATCGAGCACTTGCAGCTGCTCATGGAC 1848
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1849 AAAGCCAAGGTGAAGCTACAGAAAGAGTTTGAAGTCTGGTGGGCAGAGGAGGCCACCAACCTGCAGGTAAATTC 1922
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1923 TCCAGCAGTGAATTCACTCGATCACACGAAGCCATTTCTCCAGACATCTGACTCCCAGCATGAACGGTCCCAAC 1996
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 1997 TCCTCTCTAACAAAAGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGCACTGGCAGATTCGATGTCTGTGATGTG 2070
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 2071 AATGCCAGGAAAATCCTGCCCTCGCCTTGCCCCAGTCCACACAGCCAGAAACAGAGCAGCACCAGCACCCCACT 2144
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 2145 GGAAGACAGCATCCCCAAGAGGCCAGTGTCGTCCATCCCTCTCACCGGAGACAGCCAGACGGACTCGGACATCA 2218
Sbjct 1243 -------------------------------------------------------------------------- 1242
Query 2219 TCGCCTTCATCAAGGCCAGACAGAGCATTCTGCAGAAGCAATGTTTGGGAAGCAAT 2274
Sbjct 1243 -------------------------------------------------------- 1242
