Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13512
- Subject:
- XM_006534454.3
- Aligned Length:
- 3012
- Identities:
- 1327
- Gaps:
- 1566
Alignment
Query 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC 74
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCACATCCGGTTCAAACTGGCTCCCCC 74
Query 75 ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA 148
||||||.|||||||||||||||||||||||||||||||||||||||||.||.||||||.|||||||||||||||
Sbjct 75 ATCCTCCACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAATATTCTTATTTCTGCCAACGGAACCA 148
Query 149 AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG 222
|||||||||||||||||||.|||||||||||.|||||.|||||.|||||||||||.||||||||||||||||||
Sbjct 149 AAAGAAAAGCCATTGCTGCGGAGGATCCCAGTCTAGACTTCCGCAATAATCCTACTAAGGAAGACTTGGGAAAG 222
Query 223 CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA 296
|||||.|||.|||||||||||||||||||||||||||||||||||||||||.||||.|||||||||||.|||||
Sbjct 223 CTGCAGCCATTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCGCAAAAGAGTCTTTGAAATTGCA 296
Query 297 AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
|||.||.|||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||
Sbjct 297 AGGCGTTTTCAGCAAGCAGACAGTCCTTAAGTCTCATCCTCTTTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
Query 371 TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT 444
||.|||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||
Sbjct 371 TGCTGGGGAGGCAGCCAGTTTTGGAGTTTTCCTTAGAAAACCTTAGAACCATGAATACAAGTGGTCAGACAGCT 444
Query 445 CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC 518
|||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 445 CTGCCACAAGCGCCTGTAAATGGATTGGCTAAGAAATTGACTAAAAGTTCAACACATTCGGATCATGACAATTC 518
Query 519 CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT 592
||.||||||||||||||||||||||.||||||||||.||..||||.||.||.|||||..||||.|||.||||.|
Sbjct 519 CAGTTCCCTCAATGGGGGAAAACGGTCTCTCACTTCGTCATCTCTACAAGGTGGTGAGGTGGGGGGACCTGACT 592
Query 593 CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG 666
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.|.
Sbjct 593 CTGGGAACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATATACAACACACAACTCTA 666
Query 667 TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG 740
|||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.||
Sbjct 667 TATAGCAATAATAGCACTGCAAACAAATCTTCTGTTAATTCCATGGACCAGCCGGCACTTCAAGGAAGCAGCAG 740
Query 741 ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT 814
.|||||||||.|||||||||||||||||||||||.....|||.||.||.||.|..|||||||||||.|||||||
Sbjct 741 GTTATCACCTAGTACAGACTCCAGCTCTAACTTGACAAATGTGAAGTTAGAAGTCAAAAAGTCTCCTCTGTCTT 814
Query 815 CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC 888
||||||||||||||||||||||.|||||.|||||||||||||||||||||.||||.||||||||.|||||||.|
Sbjct 815 CCATTCTTTTCAGTGCTTTAGACTCTGATACAAGGATAACAGCTTTACTGAGGCGGCAGGCTGATATTGAGATC 888
Query 889 CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT 962
||||||||.||.|||||.|||||.||||||||||||||||||||||||||.|||||.|||.||||.||.||.||
Sbjct 889 CGTGCCCGAAGGTTACAGAAGCGATTACAGGTTGTGCAAGCCAAGCAGGTGGAGAGACATTTACAGCACCAACT 962
Query 963 GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC 1036
|||||||||||||||||.|||.|||||.|||||||||||||||||||||||.||..|.|||||||||||||||.
Sbjct 963 GGGTGGATTTTTGGAGACGACATTGAGTAAACTGCCAAACTTGGAATCCTTAAGGTCCCGGAGCCAGTTGATGT 1036
Query 1037 TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT 1110
||||.|||||||||||||||||||||||||||||||||||||||.|..||||||||||||||||||||||||||
Sbjct 1037 TGACCCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGTCTGCCACTTCAGAGGGACTTAGCAACTTT 1110
Query 1111 CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA 1184
.|||||||..||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 1111 TTGAAAAGTGATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACCTGAGGTGCAGTGA 1184
Query 1185 ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA 1258
.||.||.||||||||.||||||||.|||||||||||.||||||||||||||.||||||||||||||||||||..
Sbjct 1185 GCAAGCGTTTGATTCGGATGTCACAGACAGTAGTTCCGGAGGGGAGTCTGACATTGAAGAGGAAGAACTGACTC 1258
Query 1259 GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT 1332
||||||||||.|||||..|.|||||.|||||||.|||.|||||.|||||||.|||||||||||||||.||||||
Sbjct 1259 GAGCTGATCCTGAGCAATGCCATGTGCCCCTGAAACGTAGGTCTGAATGGAGATGGGCTGCAGACCGAGCAGCT 1332
Query 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT 1406
|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCCCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGATAT 1406
Query 1407 TTACAAACAGATACGTGCTAATAAGGTT---TCTGTGTGGAGACAG---------------------------- 1449
|||||||||||||||||||||||||.|| |||||.| ..|||
Sbjct 1407 TTACAAACAGATACGTGCTAATAAGATTGAGTCTGTTT---CTCAGCCATCAGAAAACCATGGTATCCTTGTTA 1477
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1478 GTAATATTACAGAGTCATTGTCTACCAAATCATGTGGAGCACCGCGACCTGTCAATGGAGTTGTTAACAGTCTT 1551
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1552 CAGCCTGTCCTGGCAGACCAAGTTCCAGGTGACAGCTCTGATGCTGAGGAACAATTACATAAAAAGCAAAGGCT 1625
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1626 GAATTTAGTTTCTTCATCTGATGGCACGTGTGTCGCAGCCCGAACCCGGCCTGTACTGACCTGTAAGAAACGGA 1699
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1700 GGCTTGTTAGGCCCAGCAGCATCGTTCCTCTTTCTAAGAAGGTTCACCGTAATGTCCGCTCTGGCTGTGATGTG 1773
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1774 AATCCCTCTTGTGCACTGTGTGGTTCAGGCAGTGTGAACACCATGCCTCCTGAAATACACTATGAAGCACCTCT 1847
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1848 CTTAGAGCGTCTTTCCCAGTTGGACTCCTGCGTTCACCCTGTGCTAGCATTTCCAGATGATGTTCCCACAAGCC 1921
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1922 TGCACTTCCAGAGCATGCTGAAGTCTCAGTGGCAAAACAAGCCTTTTGACAAGATCAAACCTACCAAAAAGTTT 1995
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1996 TCTCTTAAGCACAGAGCGACCATGCCATGCAGTCTGTCAGATCCAGTTCGTAAAGACAGACACAAGTTGGTCAA 2069
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2070 CTCCTTCCTTACAACAGCCATGTTGAAGCATCACACAGACATGAGCAGTCCGAGCTACTTGACAGCTACCCACC 2143
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2144 ATCCACCCCACAGCCCCCTGGTGAGACAGCTCTCCACCTCATCAGACACCTCCACACCCACCAGCTCGGGCTCA 2217
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2218 CAAGTTGCAGCCAGCACATCTCAGCCAGTGAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACAACATTGT 2291
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2292 CATCCCAATGTCTGTTGCTGCAACAACTCGTGTTGAGAAACTACAATACAAAGAAATCCTTACTCCAAGCTGGC 2365
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2366 GAGAGGTTGATGTTCAGTCTCTGAAGGGGAGTCCTGATGAAGAGAATGAGGAGATCGAGGACCTATCTGATGCA 2439
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2440 GCCTTTGCGGCCCTGCATGCCAAATGTGAGGAGATGGAAAGGGCAAGGTGGCTGTGGACCACAAGTGTGCCACC 2513
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2514 CCAGCGTCGGGGCAGCAGGTCTTACAGGTCATCAGACGGCCGGACCACCCCTCAGTTGGGCAGTGCCAACCCCT 2587
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2588 CCACCCCACAGCCTGCGTCCCCTGATGTCAGTAGTAGCCACTCTCTGTCAGAATTCTCCCATGGTCAATCTCCT 2661
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2662 AGGAGTCCCATTAGCCCAGAACTACACTCAGCCCCTCTCACCCCTGTGGCTCGGGACAGTCTGCGACACCTGGC 2735
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2736 CAGTGAAGACACCCGATGTTCCACACCAGAGCTGGGACTAGATGAACAGTCAGTCCAGCCATGGGAACGACGGA 2809
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2810 CCTTCCCTCTGGCCTACAGTCCCCAGGCAGAATGTGAGGAGCAGCTGGATGCACAGGACACGGCAGCCCGCTGC 2883
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2884 ACTCGCCGCACCTCAGGCAGCAAGACTGGCCGGGAGGCAGAGGTGGCACCCACCTCGCCTCCTGTTGTCCCGCT 2957
Query 1450 ---------------------------------------------------- 1449
Sbjct 2958 CAAGAGTCGGCATCTGGCAGCAACAGTCACAGCTCAGCGCCCAGCTCACAGA 3009
