Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13512
- Subject:
- XM_011524629.3
- Aligned Length:
- 3213
- Identities:
- 1445
- Gaps:
- 1764
Alignment
Query 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGCGATGGCGCCCGCTCTCACTGACGCAGCAGCTGAAGCACACCATATCCGGTTCAAACTGGCTCCCCC 74
Query 75 ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATCCTCTACCTTGTCCCCTGGCAGTGCCGAAAATAACGGCAACGCCAACATCCTTATTGCTGCCAACGGAACCA 148
Query 149 AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAAGAAAAGCCATTGCTGCAGAGGATCCCAGCCTAGATTTCCGAAATAATCCTACCAAGGAAGACTTGGGAAAG 222
Query 223 CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGCAACCACTGGTGGCATCTTATCTCTGCTCTGATGTAACATCTGTTCCCTCAAAGGAGTCTTTGAAGTTGCA 296
Query 297 AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGGGTCTTCAGCAAGCAGACAGTCCTTAAATCTCATCCTCTCTTATCTCAGTCCTATGAACTCCGAGCTGAGC 370
Query 371 TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGTTGGGGAGACAGCCAGTTTTGGAGTTTTCCTTAGAAAATCTTAGAACCATGAATACGAGTGGTCAGACAGCT 444
Query 445 CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGCCACAAGCACCTGTAAATGGGTTGGCTAAGAAATTGACTAAAAGTTCAACACATTCTGATCATGACAATTC 518
Query 519 CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACTTCCCTCAATGGGGGAAAACGGGCTCTCACTTCATCTGCTCTTCATGGGGGTGAAATGGGAGGATCTGAAT 592
Query 593 CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTGGGGACTTGAAGGGGGGTATGACCAATTGCACTCTTCCACATAGAAGCCTTGATGTAGAACACACAACTTTG 666
Query 667 TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TATAGCAATAATAGCACTGCAAACAAATCCTCTGTCAATTCCATGGAACAGCCGGCACTTCAAGGAAGCAGTAG 740
Query 741 ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATTATCACCTGGTACAGACTCCAGCTCTAACTTGGGGGGTGTCAAATTGGAGGGTAAAAAGTCTCCCCTGTCTT 814
Query 815 CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCATTCTTTTCAGTGCTTTAGATTCTGACACAAGGATAACAGCTTTACTGCGGCGACAGGCTGACATTGAGAGC 888
Query 889 CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CGTGCCCGCAGATTACAAAAGCGCTTACAGGTTGTGCAAGCCAAGCAGGTTGAGAGGCATATACAACATCAGCT 962
Query 963 GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGTGGATTTTTGGAGAAGACTTTGAGCAAACTGCCAAACTTGGAATCCTTGAGACCACGGAGCCAGTTGATGC 1036
Query 1037 TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGACTCGAAAGGCTGAAGCTGCCTTGAGAAAAGCTGCCAGTGAGACCACCACTTCAGAGGGACTTAGCAACTTT 1110
Query 1111 CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTGAAAAGCAATTCAATTTCAGAAGAATTGGAGAGATTTACAGCTAGTGGCATAGCCAACTTGAGGTGCAGTGA 1184
Query 1185 ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACAGGCATTTGATTCAGATGTCACTGACAGTAGTTCAGGAGGGGAGTCTGATATTGAAGAGGAAGAACTGACCA 1258
Query 1259 GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGCTGATCCCGAGCAGCGTCATGTACCCCTGAGACGCAGGTCAGAATGGAAATGGGCTGCAGACCGGGCAGCT 1332
Query 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATTGTCAGCCGCTGGAACTGGCTTCAGGCTCATGTTTCTGACTTGGAATATCGAATTCGTCAGCAAACAGACAT 1406
Query 1407 TTACAAACAGATACGTGCTAATAAGGTT---TCTGT----------GTGGAGA--CAG---------------- 1449
|||||||||||||||||||||||||.|| ||||| .||||.| ||.
Sbjct 1407 TTACAAACAGATACGTGCTAATAAGATTGAGTCTGTTTCTCAGCCATTGGAAAACCATGGTGCCCCTATTATTG 1480
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1481 GTCATATTTCAGAGTCACTGTCTACCAAATCATGTGGAGCACTCAGACCTGTCAATGGAGTTATTAACACTCTT 1554
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1555 CAGCCTGTCTTGGCAGACCACATTCCAGGTGACAGCTCTGATGCTGAGGAACAATTACATAAGAAGCAACGACT 1628
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1629 GAATCTCGTCTCTTCATCATCTGATGGCACCTGTGTGGCAGCCCGGACACGTCCTGTACTGAGCTGTAAGAAGC 1702
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1703 GGAGGCTTGTTCGACCCAACAGCATCGTTCCTCTTTCCAAGAAGGTTCACCGGAACAGCACAATCCGCCCTGGC 1776
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1777 TGTGATGTGAATCCCTCCTGCGCACTGTGTGGTTCAGGCAGCATCAACACCATGCCTCCCGAAATTCACTATGA 1850
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1851 AGCCCCTCTGTTGGAACGTCTTTCCCAGTTGGACTCTTGTGTTCATCCTGTTCTAGCATTTCCAGATGATGTTC 1924
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1925 CCACAAGCCTGCATTTCCAGAGCATGCTGAAATCTCAGTGGCAGAACAAGCCTTTTGACAAAATCAAACCTCCC 1998
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 1999 AAAAAGTTATCGCTTAAGCACAGAGCACCCATGCCGGGCAGTCTGCCAGATTCAGCTCGTAAGGACAGGCACAA 2072
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2073 ATTGGTCAGCTCCTTCCTAACAACAGCCAAGCTGTCCCATCACCAAACCCGGCCTGACAGGACCCACAGGCAGC 2146
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2147 ACTTAGACGATGTGGGGGCCGTGCCCATGGTGGAGCGAGTGACAGCGCCAAAAGCAGAGCGCTTGCTCAACCCA 2220
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2221 CCACCACCCGTGCATGACCCAAACCACAGCAAAATGAGATTGCGAGACCATTCATCTGAGAGAAGTGAAGTGTT 2294
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2295 GAAGCATCACACAGACATGAGCAGTTCGAGCTACTTGGCAGCCACCCACCATCCTCCACACAGTCCCTTGGTGC 2368
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2369 GACAGCTCTCCACCTCCTCAGATTCCCCTGCACCCGCCAGCTCTAGCTCACAGGTTACAGCCAGCACATCGCAG 2442
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2443 CAGCCAGTAAGGAGGAGAAGGGGAGAGAGCTCATTTGATATTAACAACATTGTCATCCCAATGTCTGTTGCTGC 2516
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2517 AACAACTCGCGTAGAGAAACTGCAATACAAGGAAATCCTTACGCCCAGCTGGCGGGAGGTTGATCTTCAGTCTC 2590
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2591 TGAAGGGGAGTCCTGATGAGGAGAATGAAGAGATTGAGGACCTATCCGACGCAGCCTTCGCCGCCCTGCATGCC 2664
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2665 AAATGTGAGGAGATGGAGAGGGCACGGTGGCTGTGGACCACGAGTGTGCCACCCCAGCGGCGGGGCAGCAGGTC 2738
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2739 CTACAGGTCATCAGACGGCCGGACAACCCCCCAGCTGGGCAGTGCCAACCCCTCCACCCCCCAGCCTGCCTCCC 2812
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2813 CTGATGTCAGCAGTAGCCACTCTTTGTCAGAATACTCCCATGGTCAGTCCCCTAGGAGCCCCATTAGCCCGGAA 2886
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2887 CTGCACTCAGCACCCCTCACCCCTGTGGCTCGGGACACTCCGCGACACTTAGCCAGTGAGGATACCCGTTGTTC 2960
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 2961 CACACCAGAGCTGGGGCTGGATGAACAGTCTGTCCAGCCCTGGGAGCGGCGGACCTTCCCCCTGGCGCACAGTC 3034
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 3035 CCCAGGCGGAGTGTGAGGACCAGCTGGATGCACAGGAGCGAGCAGCCCGCTGCACTCGACGCACCTCAGGCAGC 3108
Query 1450 -------------------------------------------------------------------------- 1449
Sbjct 3109 AAGACTGGCCGGGAGACAGAGGCAGCGCCCACCTCGCCTCCCATTGTCCCCCTCAAGAGTCGGCATCTGGTGGC 3182
Query 1450 ------------------------------- 1449
Sbjct 3183 AGCAGCCACAGCTCAGCGCCCGACTCACAGA 3213
