Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13577
Subject:
NR_026644.2
Aligned Length:
2887
Identities:
693
Gaps:
2194

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCACTTCAGCTTCCCCTCCCCCGGCGCCCTCTGGGGCTCCGAGCCCGGCGGGACCATGTTCACCAGCACCGGCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCAGTGGGCTCTGTGAGTACCGGCCTCCGCCATCCTGGCTGCCCCCTACACGCCACCCTAGGCACCTCTTTGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGGCTGGGGCAGCGGGGACCCTCGGGTTTGCCGGAGGTGGTGGGGCCGACCCTCCAGACCCGCGTCCGAACCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTAGTTCCCGGTCTTGGGGGTCAGCGGAAACCGCCCCCATTTCGGCCTGGAGGGGCGAATGGGGACAAAGCC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGCCGCCCGCCCCGACCCCACCTGGTATCCCCAGGTGCTCTGCCCAGGAGTCTCTTGGGGCCGCTGCAAGTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCAGGTGCCCTGGTGTTCTCGTGGGCCGGCCCCAGGCCCTTTGCGGAGCGTGTGCCGCGCTGAAGGAAGGGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GTCCCCCTTACCATGCCCCATTCTTTTAGGCTTGGGGGACCGAACTAACTCCCCCCGCCCCCACTTGCAAAGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGCCTCCGCTTTAGAAGCTGACCTCTCAGTTTCACTTGGATGTGTTTCTTCTTCAGTCTCCAAGAAGAGTTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAGACAAACACACACTGATGAGAGTGCTTTCAAGTGGAGGGAAGTTAGGAAGTCGTGGCGAGGGAGCGCAGCTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGCTGCTGGATGTTGCTGTTTTCCTGGCGTGTTAGCGGTGGTCAGCAGACAAGGCGCCTCTGTCGAAGAGCCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CTGCTGGTCCCCAGTGCCCTCTCCCTCCTGCTCGCCCTCCTCCTGCCTCACTGCCAGAAGCTCTTTGTGTATGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTTCACGCAGTCAAGAACGACTTCCAGATTTGGAGGTTGATATGTGGAAGAATAATTTGCCTTGATTTGAAAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATACTTTCTGCAGTAGTCTGCTTATTTATAATTTTAGGATATTTGAAAGAAGATATGGAAGCAGAAAATTTGCA  962

Query    1  ------------------------------------------------------------ATGCAGTATTTCTT  14
                                                                        ||||||||||||||
Sbjct  963  TCCTTTTTGCTGGGTTCCTGGGTTTTGTCAGCCTTATTTGACTTTCTCCTCATTGAAGCTATGCAGTATTTCTT  1036

Query   15  TGGCATCACTGCAGCTAGTAATTTGCCTTCTGGATTCCTGGCACCTGTGTTTGCTCTGTTTGTACCATTTTACT  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGGCATCACTGCAGCTAGTAATTTGCCTTCTGGATTCCTGGCACCTGTGTTTGCTCTGTTTGTACCATTTTACT  1110

Query   89  GCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTATATA  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GCTCCATACCAAGAGTCCAAGTGGCACAAATTCTGGGTCCGTTGTCCATCACAAACAAGACATTGATTTATATA  1184

Query  163  TTGGGACTGCAGCTTTTCACCTCTGGTTCCTACATCTGGATTGTAGCCATAAGTGGACTTATGTCCGGTCTGTG  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TTGGGACTGCAGCTTTTCACCTCTGGTTCCTACATCTGGATTGTAGCCATAAGTGGACTTATGTCCGGTCTGTG  1258

Query  237  CTACGACAGCAAAATGTTCCAGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGA  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTACGACAGCAAAATGTTCCAGGTGCATCAGGTGCTCTGCATCCCCAGCTGGATGGCAAAATTCTTTTCTTGGA  1332

Query  311  CACTTGAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATC  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CACTTGAACCCATCTTCTCTTCTTCAGAACCCACCAGCGAAGCCAGAATTGGGATGGGAGCCACGCTGGACATC  1406

Query  385  CAGAGACAGCAGAGAATGGAGCTGCTGGACCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAG  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAGAGACAGCAGAGAATGGAGCTGCTGGACCGGCAGCTGATGTTCTCTCAGTTTGCACAAGGGAGGCGACAGAG  1480

Query  459  ACAGCAGCAGGGAGGAATGATCAATTGGAATCGTCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAACTATC  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ACAGCAGCAGGGAGGAATGATCAATTGGAATCGTCTTTTTCCTCCTTTACGTCAGCGACAAAACGTAAACTATC  1554

Query  533  AGGGCGGTCGGCAGTCTGAGCCAGCAGCGCCCCCTCTAGAAGTTTCTGAGGAACAGGTCGCCCGGCTCATGGAG  606
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGGGCGGTCGGCAGTCTGAGCCAGCAGCGCCCCCTCTAGAAGTTTCTGAGGAACAGGTCGCCCGGCTCATGGAG  1628

Query  607  ATGGGATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTT  680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  ATGGGATTTTCCAGAGGTGATGCTTTGGAAGCCCTGAGAGCTTCAAACAATGACCTCAATGTCGCCACCAACTT  1702

Query  681  CCTGCTGCAGCAC-------------------------------------------------------------  693
            |||||||||||||                                                             
Sbjct 1703  CCTGCTGCAGCACTGATAGTCCCAGGCCAACACTGGGACCGGACCGGCAGCCGAGTGACAGTGCGTGGTCCCCA  1776

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1777  CCATCAGATCAGCCCGGGGACCGAGCATCTCTGGTGCTGATGTTCTTGTGGGAAGAGGGAGGTTCCACCGCACC  1850

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1851  CCTGCCCTCAACCGCAAGACTGTTGCCGTTTTAGTGTGGAGATAAGTTTGCCATTACATTAGCATGTATTTTCT  1924

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1925  ATCTATATTTTTTATTGGGCATTTTCCCTAGGTTGGAGAGTCAGCACTCGTTTTGAATGTGTTTAAAATGCATT  1998

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1999  AAAATGGAAGATTTCTGCAGGCAGTTGAATGGCACTCCAGATGGGGAATTGCTGTAACCCTCTTACTGTAACAT  2072

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2073  GTCATCTCCTGCGTCGTGATGGGGAGAGGGTAATGTTACTTCACAAAGGACATGTCAGATCCTTCTTCATGGAC  2146

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2147  TTTTTTAGTTACTGTTTTTTCTCTCAAACTTGTTTTCGAATCTCCTGGGAGTGAGGGAGAAACAGGGAGCTGAA  2220

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2221  TCCTCCCCCAAGCTGTTCCAGGCCAGAGGACTCTGCAGTACCTTCTCCTACATCTAGTAACAAAGAATGGTGAT  2294

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2295  AACCATGCACTGGTTCAAGGTTCTGGAGTTCTCCATGAAACTTGGGTTAATTTTGCTCAGAGTATCCAGAGTTA  2368

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2369  GCCACTAGGCTGCGGGTGAAATGGGATGGAGAAGAACAACAGCAGGCTTCCTGGAGCCACATGGGCTGACTAGG  2442

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2443  GCACTCTGTGGCTGGCCTGGCATGGGCTCAGCCCAGGAAGAGGAGAAACGATCCCTTGCCTGCCCCTCCCTGTG  2516

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2517  GCAGGGCTAACTGCCTGGCCCTCCTGGCTCGCAGCCAGCCAGCCCCCTGGCAGCAGGTTCTCCTCAGGGCTTGG  2590

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2591  GTCTTCAACCTGTGGCGACAGGAGGCAGGGCAGACTGTGGAGGACAGGATGCAGGTCAGGGAGAGGGAAGGCAG  2664

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2665  GGGTGGACCGCCATGAGCATGAAAAGACCCGAAGCAAGTTGACTCTTGCAATGTGCAACTGTTATGTTCTGCAA  2738

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2739  AATGAGCAACGATGTATCAAATTGATGCAAATTTAGATGTTGATACTTACAATAAAGTTTTTAATGTGTTTTAC  2812

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 2813  TCTTCAGTATTTTTCTATCAGACTTGTACAAATAAAGCCTTGTTCCAGGCTATACATATTTACCAGTCAACCAA  2886

Query  694  -  693
             
Sbjct 2887  A  2887

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.