Construct: ORF ccsbBroad304_13577

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011207.1_s304c1, BRDN0000408484
Derived from:
ccsbBroadEn_13577
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UBAC2 (337867)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13577
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 337867 UBAC2 UBA domain containing 2 XM_006719948.3 100% 100%
2 human 337867 UBAC2 UBA domain containing 2 XM_011521083.2 76.3% 72.8% (many diffs)
3 human 337867 UBAC2 UBA domain containing 2 XM_017020553.1 74.1% 67.7% (many diffs)
4 human 337867 UBAC2 UBA domain containing 2 NM_177967.4 72.1% 68.8% (many diffs)
5 human 337867 UBAC2 UBA domain containing 2 XM_011521082.2 70.3% 67.1% (many diffs)
6 human 337867 UBAC2 UBA domain containing 2 NM_001144072.2 67.1% 67.1% 1_339del
7 human 337867 UBAC2 UBA domain containing 2 NR_026644.2 24% 1_1022del;1716_2887del
8 mouse 68889 Ubac2 ubiquitin associated domain... XM_006519493.3 59.4% 59.4% (many diffs)
9 mouse 68889 Ubac2 ubiquitin associated domain... NM_026861.2 57.5% 58.5% (many diffs)
10 mouse 68889 Ubac2 ubiquitin associated domain... XM_006519492.2 53.4% 54.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
762
ORF length:
693
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcagtatttc tttggcatca ctgcagctag taatttgcct tctggattcc
121tggcacctgt gtttgctctg tttgtaccat tttactgctc cataccaaga gtccaagtgg
181cacaaattct gggtccgttg tccatcacaa acaagacatt gatttatata ttgggactgc
241agcttttcac ctctggttcc tacatctgga ttgtagccat aagtggactt atgtccggtc
301tgtgctacga cagcaaaatg ttccaggtgc atcaggtgct ctgcatcccc agctggatgg
361caaaattctt ttcttggaca cttgaaccca tcttctcttc ttcagaaccc accagcgaag
421ccagaattgg gatgggagcc acgctggaca tccagagaca gcagagaatg gagctgctgg
481accggcagct gatgttctct cagtttgcac aagggaggcg acagagacag cagcagggag
541gaatgatcaa ttggaatcgt ctttttcctc ctttacgtca gcgacaaaac gtaaactatc
601agggcggtcg gcagtctgag ccagcagcgc cccctctaga agtttctgag gaacaggtcg
661cccggctcat ggagatggga ttttccagag gtgatgcttt ggaagccctg agagcttcaa
721acaatgacct caatgtcgcc accaacttcc tgctgcagca cttgccaact ttcttgtaca
781aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
841ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)