Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13623
- Subject:
- XR_001744710.1
- Aligned Length:
- 3574
- Identities:
- 457
- Gaps:
- 3101
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCGACCCGTGGCTCCCCCTCGCAACTTGGCGGGCCTCCTCCCTTTTGTCCGGCCCGGTCCGGCCGCCGCCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCCGCGCCTGGCGCCGAGCTCCCGGGTCCCCGGGCCGGCTGTCGGTGCCGGCAGGGCGCGGAGGGGGCGGGGG 148
Query 1 ---------------------ATGAGCTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAG 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCGCGGCTCGTCCCCCAGCGGATGAGCTGCCGCGGACGGGGCGCGGGCGGACGATGGAACTCCACATCCTGGAG 222
Query 54 CACCGGCTGCAAGTTGCCAGCGTCGCCAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCT 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CACCGGCTGCAAGTTGCCAGCGTCGCCAAGGAGAGTATCCCGCTGTTCACCTACGGGCCTGATCAAACTTGCCT 296
Query 128 TCCTGTTCTCCAAGACCAGGTGCAAGTTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGAT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCCTGTTCTCCAAGACCAGGTGCAAGTTCTTCAGTCTGACTGAGACACCAGAGGATTACACTATCATTGTCGAT 370
Query 202 GAGGAAGGATTCCTAGAGCTGCCCTCCTCAGGGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGT 275
|||||||||||||||||||||||||||||.|.||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGGAAGGATTCCTAGAGCTGCCCTCCTCGGAGCACCTGAGTGTGGCGGATGCCACCTGGCTGGCCCTGAACGT 444
Query 276 GGTGTCCGGCGGTGGCAGCTTCTCCAGCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCC 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGTGTCCGGCGGTGGCAGCTTCTCCAGCTCCCAGCCTATTGGCATGACCAAGATCGCCAAGTCAGTCATCGCCC 518
Query 350 CACTGGCTGACCAGAACATATCCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTGGTGCTCAAGCGG 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.||
Sbjct 519 CACTGGCTGACCAGAACATATCCGTGTTCATGCTGTCCACGTATCAGACAGACTTCATCCTG----TCCAG--- 585
Query 424 GACCTGCCCTTTGTCACCCACACGTTGT----------CATCAGAGT------TCACCATCCTG---------- 471
.|||| .||||.||||.|..||| ||.||| || ||||||.||||
Sbjct 586 ---ATGCC---GGTCATCCACCCACTGTCCAGCCCGAGCAACAG-GTTCTGTGTCACCAGCCTGGACCCCGACA 652
Query 472 -------TGGTCAGTGGCTAGACTG------------------------------------------------- 489
|| |.||.||.|.|||.
Sbjct 653 CGCTGCCTG--CTGTTGCCACACTCCTCATGGATGTCATGTCCTACTTCAATGGAGAAGAGAACAGAAGAATAA 724
Query 490 -------------------------------------------------------------------------- 489
Sbjct 725 CAGCAGAAGATACGCAGCCTGTAATGGACTGAATATCTGTGTCCCCCTAAACCCACATATTGAAATCCTTCCCC 798
Query 490 -------------------------------------------------------------------------- 489
Sbjct 799 CAGTGTGATGCTGTTTGGAAGTGGGGCCTTTGGGAGGTGATTGGGTCATAGGGGTGCAGCCCTCATGGATGGAT 872
Query 490 -------------------------------------------------------------------------- 489
Sbjct 873 GAATGCCCTTCTAAGCCCAGGCCAGAGGGCTAGCTTGCTGTTTCTCCTCCAGGTGAGGATACAACTAGAAGCCA 946
Query 490 -------------------------------------------------------------------------- 489
Sbjct 947 GCAGTCTACAGGCTGGAAGAAGGCCCTCACCAGAACCCAACCCTTGGACTTCAGCCTCCAGAACTATTCATTCA 1020
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1021 GCTTTTCCAGACCAGGCATCACCGAGCGGAGAGAGGGGAAACACCCTGGCTTCTCTTTGGCACATCAGCCCCTA 1094
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1095 GTTCTTGAGAGAGAAGGGCAGGGTGGTCTACTCACCATGTCTGTATCCTGCCGTTCTTCATTTGACTCATCCTG 1168
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1169 GATTTCTAACTCTTCTTCCTCGTCCTCTTCCATAAGGCTGAGTCTGATGTAGGGGCAAAGAGACTGGCTTTTCA 1242
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1243 AACTGTTCTTTGAGGACCCCTGAGAGTTTCTCAGACACCCGGGGTGGGGGAAGTGGGGAGCAGTAAGTACAGCA 1316
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1317 TAGTAGTTTCCCGATTGTGCTGACAGGAAGTGCTCTGTGGCTAAAACAAGTCCAAAAAGCACCCACAGAGAGGC 1390
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1391 AATGGGTGAGACAGGAATCCCCTCACAGTGGGCGACAGATCTGAAGTGAAGACAGGAGATGATGAGAAAAGCTC 1464
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1465 ACCGCATCAGCTGGTTGCCCAGGCCAGGACCTGAAGGGTTGTGTGGAGTCTGGAAATATTGTGGACCCAAGAAC 1538
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1539 CTTGACCTCTCGGTGCCTGCGACGGGCTGACTGCTGGGAATGAAGCAGGATCAATGATGGGATAAAAATCAAGG 1612
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1613 GGCCTTGGTGTACCTTGTTGTAGTGTTTGAAAACATCTGAGGCTGCATCCATCTCCAGCACCCCATAAAGCAAC 1686
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1687 AGCTTGCAGAACCCGGCTAGGAGGCGGCGCCGCTGGTGTAGCCGCTCTATCTGTAAATGATCCTCCTGGGAATC 1760
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1761 ACCTGGCTCACATGGAAGGCAAAAGGGAATCACAGACTTAAGCTTCCTGCCCTATATTTCTGAGCTACACCCAA 1834
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1835 GCCCCAGCCCTTACTGAGCCCCAGGTATAGAGTCACTGCACCACTGCCCAGGTCTCCCGGCTGGATGAAGACGT 1908
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1909 GGTCCATGAGGAAGCTGGCTAGCTCAGACTGGAGAGTAGCTTCAGGAAAAAAGACAAGTGGCCTAAGGAAATCA 1982
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1983 CGGCCCCCAACAATCATCTGAGGGCTAAAGATGAGAAGTAGATCACTTAATAAGACAAAAGCCTGTAGGGGGAA 2056
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2057 AAGAAAGGATGTTTAAAAGGACAGAATGTTTCCCAAGGTAGAAATGACACTGTCAATTTCTCCTTGGAATGGGG 2130
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2131 GCAGGGATACTCGCCTTGTTGCTCCCACTTGAGTCAGTACTCACCTGCTCCTGGATCTCAGTATCCACATCTGA 2204
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2205 GAGGCAACTCTGGCAGAGTTCACAGAAGGCCACCATTCTGTCCCTCAAACTCGACAGCTGCTTCTGTGGGCACA 2278
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2279 GTGGCTTGAAGGGGAAGAATGAAGACACAGACTCCTCTGTTCCCATTATCCCATCTAAGACCCACACTCACCTG 2352
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2353 GGAAGCATCTGATTTAGAAATGTGGGTTAGTGTCCAGAGAATGGAAAAATAGACAAGAGTCAAGGCTGGCAGGA 2426
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2427 TAACCTGTAACAACAAAGGGTTTGAAAAATGAGGTTTGGGTTAGGAGAGGGAGAGACAGATAGCCAGAAACACA 2500
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2501 CCAGTGAAGAGGAGAGAAAATGAGTAAAGGGAGAGCTAATTCCTTTTCCAGTGGAAAATGAGTGATATTCTGGA 2574
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2575 CATTCTTCAGAGGCATCTACACGAAGTAGAAATGTCACCGCTCCCTAATTTACTCTACGTCTTCTAGAATCCCT 2648
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2649 CAATATTATCCTTGGCTTCCAGGAAATCCAAGAAGACCCTGGAAGTAGAGTCCACCTTCTAAGAGAGGAATGTA 2722
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2723 AGAGGTGACCCCCACCCACCTGATCTTCCTCGCTTTGTCCACTCCACGCACTGAGACTTGACACACCTAGTGGC 2796
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2797 CACCTAGAACGTAGGTCCTTAAAATCTAGCCCCCCAGCCCCCAACCCATCTCTAGCCTGTCCACTCACCTGGTG 2870
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2871 AGGAACCTCTCCTGTGTCCACAGCCTTCTGCAGGAGTTGGCAACATGGCTCATAGAGCTCCCAGCGAGTCAGGT 2944
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2945 CATGAGTGCTTTGGGGGAGAAAGGGGAATGTTATACTGGAAAAGAACAGAGGGAACCAACTCCACAGACACCAG 3018
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3019 TAAAAACGGGATGGGGAAGAGGAGGAAAGCCACTCACTTGTAGAAGGCAGAGAGGCGTTTCAGAGTGGCTGCCA 3092
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3093 GATTATATACCTCATCCTCATCTAGGAAGGACGACTGAGAAGGAAAGAAGATCCACAATAGCATTTCCCCCAGA 3166
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3167 ACTCATCAGTCCACATCCCCCGTCTTGCAGCCCCTCCCACCCTTGTTTGGGGTGTCCCATTGTCCAGCCCCAGC 3240
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3241 TCCTACCTGTAACAGCTCTTCAAGCTCCTGCTGGAAGCGGTCAGTCAGCAAATCTACTAGCTGGCTGCGGGCAA 3314
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3315 AGTCCGCCCGGCTGAAGAAAGTGAATTCGGGATTACAGAGCAGGTAGAGGGCATGCGCCCCAGCCTCAAGCACC 3388
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3389 GCTGGCTCTGCATGCTTCACCACCACCTCCTGGAGTTGCTGCAGGAACAGCTCCAGGTGCTGAGAAGAAAAGGC 3462
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3463 AGAAGATGGTGTGCTGTGGGGATGGGAGGAGGACACTCTTCTGGCGGGAAGTGGAACGGGGTTAAAAGCATTAA 3536
Query 490 ---------------------- 489
Sbjct 3537 ACTTCAAGGATAAGATGCCTAA 3558
