Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13681
- Subject:
- XM_011525175.2
- Aligned Length:
- 1703
- Identities:
- 1054
- Gaps:
- 601
Alignment
Query 1 ATGGACGTGGTAGAGGTCGCGGGTAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
Query 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
Query 149 GGATTGTACA---------------------------------------------------------------- 158
||||||||||
Sbjct 149 GGATTGTACAGTCCTGCCCCTCCTGGGAATCAGCCCCACAGGAAGGCCCTTGTCCTCCCTTCCCTGTGCCTTCT 222
Query 159 -------------------------------------------------------------------------- 158
Sbjct 223 CCTGGGCTGAGCCCTGAGCTGGAAAGGGACAGAGCCAGTCCTTTCTGGGGGTCGGCACCCAGGCTGGGGCCGCT 296
Query 159 ---------------------------------------------TGAGACGGAGCTGCCTCCTCTGACTGCGC 187
|||||||||||||||||||||||||||||
Sbjct 297 CCAGGCCCCGTGCAGTTCCTCAGCTCTGCCTGGGTTGCCTTACAGTGAGACGGAGCTGCCTCCTCTGACTGCGC 370
Query 188 GGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAA 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAA 444
Query 262 TACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTC 518
Query 336 AGTCCTCCTGAACATTGAGGAAATGAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA 409
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTCCTCCTGAACACTGAGGAAATGAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA 592
Query 410 GGTCATCTGAGCACATCCAGCGCATCGACCGGGACATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGAT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGTCATCTGAGCACATCCAGCGCATCGACCGGGACATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGAT 666
Query 484 CGATACGGAACCAAGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGATACGGAACCAAGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTA 740
Query 558 CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG 814
Query 632 TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC 888
Query 706 CAAGACCAACAGGAGCATGTGGTAGCCACGTCACAATCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATG 779
||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct 889 CAAGACCAACAGGAGCATGTGGTAGCCACGTCACAACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATG 962
Query 780 TGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGATATTGATTGACGGG------------------------- 828
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGATATTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCC 1036
Query 829 ----------GTA------AGGAGGC------------------ATA--------------------------- 841
||| ||.|||| |||
Sbjct 1037 TGTGGGACGTGTATCTGGTAGAAGGCGAACAGGCGTTGATGCCGATAACAAGAATCGCCTTTAAGGTTCAGCAG 1110
Query 842 -------------------------------------------------------GGGAGACCCT--------G 852
||.||||||| |
Sbjct 1111 ACCAAACCCGAGCAAGGGTCGTCGGCATCCAGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCAAGGG 1184
Query 853 GCTCAG---GGACCTTCCTTGCCCTGCAG--------------------TGCCCTGCTTCCCCAGCC-CGGG-- 900
|..||| ||.||.|||..||||..||| ||..|.|||||||| ||| ||||
Sbjct 1185 GGACAGGCAGGCCCCTCCAGGCCCACCAGCCCGGTTCCCGCGGCCCATTTGGTCAGCTTCCCC-GCCACGGGCA 1257
Query 901 ------------------------GGTCTGGCT--------------------------CACT---------CC 915
|||..|||| |||| ||
Sbjct 1258 CCTCGTTCTTCCACACCCTGTCCTGGTGGGGCTGTCCGGGAAGACACCTACCCTGTGGGCACTCAGGGTGTGCC 1331
Query 916 CAGCC---------CACA-GGAGG--CTCAGG----CGGG----TC--------------------------CC 943
||||| |.|| ||||| |||||| |.|| || ||
Sbjct 1332 CAGCCCGGCCCTGGCTCAGGGAGGACCTCAGGGTTCCTGGAGATTCCTGCAGTGGAACTCCATGCCCCGCCTCC 1405
Query 944 CAAAGGAC----ACACAAGCAAA--ACCC-----TCTGCC----------CA---AGAG-----GGGTC----- 983
|||.|||| || |.|.| .||| ||.||| || |||| |||||
Sbjct 1406 CAACGGACCTGGAC----GTAGAGGGCCCTTGGTTCCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTGC 1475
Query 984 ---ATCCCAGG-GCAATGGCTGG-----GGCT--CAGGC---CCAGCCT-------------CATGGG------ 1024
|||||||| |.|...||||| .||| ||||| .||.||| .||.||
Sbjct 1476 CATATCCCAGGAGGACCAGCTGGCCCCCTGCTGGCAGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTCG 1549
Query 1025 -------CAG-ACTG-----GGCCAGG--ACCCGACTTGAGAGGGCTCAGGGAAG------------------C 1065
||| |||| |.||||| |||| .|||.||| ||| |||||.| |
Sbjct 1550 CTGCACCCAGCACTGATTCCGACCAGGGCACCC-CCTTCAGA--GCT-AGGGACGAACAGCAGTGTGCTCCCAC 1619
Query 1066 CTCAAGCCCTGGGCAAGCCCCTCTCTCCAGGAGCCACATCCCCACT--CAAA----TGAGTGCCCCCCA----- 1128
||||.|.|||.| ||||| |..|| |.||||| .||| |.|||.|||.|||
Sbjct 1620 CTCAGGGCCTTG-------CCTCT-----GCGGC-----CTCCACTTGGAAAGTTCTCAGTTCCCTCCAGGCTT 1676
Query 1129 - 1128
Sbjct 1677 C 1677
