Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13699
Subject:
NR_146079.1
Aligned Length:
3080
Identities:
564
Gaps:
2468

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCCCGGGGCCCGAAGTTGTTTTCCGAGGCGCGGCGGCGAGGACAGCGGCCCGGGGTGCGCCCCCTTTGTCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCGGCCGGCGCCGCGTCCCCGCGCGCTTACCTGGTCTTGGAGGACAGGAAGAGACGGGGTTTCGCCATGTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAGCTGCCCGCCTCAGCCTCCCAAAATTCTGGGATTACAGTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTGCTGATCTTGATCTCGTGATCTGCCTACCTCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTCCCAGAGTGCTGGGATTACAGGCGTCAGCCACCGCACCTGACCAGGAGTGGATTTTATATCTAAAGCTACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTTTAAACCACAAGGGCATCTGCTAAATACCACCCAAGGAGAAGCTAAGTTGTCAAAATGCCCACTCAACCCTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAAACATCGCAAACCCACCCTTTTCTGATCTCTACTCCAACGTCTTTTGTTTTTGTTCTGTCTTACACCAGGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GAAGAGAGAGATTCGTGTTGACAAGTCCTTGTTGTCCAGACTCACACGGATACAGCTGTGGGGAAGGAAGGAAG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTGCAATGCTGCTGTTTCCATGAACATGCCTGGCACCCTCCAGGTGTCAGCAGGGCCAGGGGAGTGGAGAACT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGTCTCCCTCTCCGCTCCTCTACAGAACACAGTAGTACTGGACTCTGAAACGGGCATGTACAGAGAAGAGGAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCCCAACACGCTTCAAGCTTTGAGTGGAGAGGACACAGCCTCTGCTGGGACAGGGAACAGAGGGATGCGGAGAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTGAAGATGCTTTTGGACAGTGGTCTGAGGTTGGGACAGTGGCAGGAGATACCATTCACCCAGGATCTCCAGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ACAAGAGATCAGCCTGGCAGTTACATGTGTTTTTTTTCAAACTGGTTGCCAGGTTGGCATGAGCGATGACATCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGATTCCGACCTTCCTGATTGGAGGGACCGGACTCTGTCGGCACCTGGGAGTTCAGTTGGACAACAGTAACTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTCAGAGCTGTTCTCCACTCCTGACTTCTCCCAGCCTCGAGAATTGATAACACACTCTTCTGGATCCCAGCAGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTCCAGAAGAAGACCAAGGACAGAACAGAGACTAGGTTTGGTGAGATGGGACAGATTTTGGGAAAGATCATGAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GAGCCATCAACCGCAGCCCCAGGAAGAGCGGAGCCCCCAGCGGAGCACCTCAGGGTACCCCCTCCAGGAGGTGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGGATGATGAAGTGTCGGGACCATCAGCCCCTGGGGTAGATCCCAGCCCCCCACGTAGGTCCCTTGGCTGGAAA  1332

Query    1  ------ATGGAGTGGTGGGACGAATCTGAGGAGTCGTTGGAGGAGGAGCCACGGAAGGTGCTCGCCCCTGAGCC  68
                  |..||.||.|.|||.||||||            ||.||.||||||..|||||.|||||||||||||||
Sbjct 1333  AGGAAGAGAGAATGTTTGGATGAATCT------------GATGATGAGCCAGAGAAGGAGCTCGCCCCTGAGCC  1394

Query   69  TGAGGAGATCTGGGTGGCGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCGAGTGTCGCTCGTGC  142
            ||||||||.||||||||||||||.||||||||||||||||||||||..||||||||||||||||||||||||||
Sbjct 1395  TGAGGAGACCTGGGTGGCGGAGACGCTGTGTGGCCTCAAGATGAAGGCGAAGCGACGGCGAGTGTCGCTCGTGC  1468

Query  143  TCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGATTCTTGGCCTGGGACAAA  216
            ||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||
Sbjct 1469  TCCCTGAGTACTACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGACTCCTGGCCTGGGACAAA  1542

Query  217  GATCTGAGGGTGTCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCTTCCCCTCCTG  290
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1543  GATCTGAGGGTGTCGGACAAGTATCTCCTGGCTATGGTCATAGCGTATTTCAGCCGGGCCGGCCTCCCCTCCTG  1616

Query  291  GCAATACCAACGCATTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACATGGAGGAGGACGACGAGGACTCCA  364
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.|.|||
Sbjct 1617  GCAATACCAACGCATTCATTTCTTCCTGGCTCTCTATCTGGCCAATGACATGGAGGAGGACGACGAGGCCCCCA  1690

Query  365  AACAAAACATCTTCCACTTCCTGTATAGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGCGTTGGTTCCAG  438
            ||||||||||||||.||||||||||                                                 
Sbjct 1691  AACAAAACATCTTCTACTTCCTGTA-------------------------------------------------  1715

Query  439  TTAGGCCATTCCATGAACCCGAGGGCCAGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGCGTCGGTTCCA  512
                               |||||                                                  
Sbjct 1716  -------------------CGAGG--------------------------------------------------  1720

Query  513  GTTATACCGTTCCACGAACCCGAGGGCCAGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGCGTCGGTTCC  586
                                            |||.||||||||..||||||||||||.||.|||.|.||||||
Sbjct 1721  --------------------------------AGACCCGCTCTCATATACCCTTGCTCAGTGAGCTTTGGTTCC  1762

Query  587  AGTTATACCGTTCCATGAACTCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAACGACGGTTC  660
            ||||||.|||||.|||||||.|||||||||||||||||.||||||||||||.|.||||||.|||....||||||
Sbjct 1763  AGTTATGCCGTTACATGAACCCGAGGGCCAGGAAGAACTGCTCTCAGATAGCCTTGTTCCGGAAGTATCGGTTC  1836

Query  661  CACTTCTTCTGTTCCATGAGCTGCAGGGCTTGGGTTTCCCCAGAGGAGTTGGAGGAGATCCAGGCTTATGACCC  734
            ||||||||.|||||||||.|||||||||||||||||||||..|||||||||||.||||||||||||||||||||
Sbjct 1837  CACTTCTTTTGTTCCATGCGCTGCAGGGCTTGGGTTTCCCTGGAGGAGTTGGAAGAGATCCAGGCTTATGACCC  1910

Query  735  AGAGCACTGGGTGTGGGCGCGAGATCGCGCTCACCTTTCC----------------------------------  774
            ||||||||||||||||||||||||||||||.|||||||||                                  
Sbjct 1911  AGAGCACTGGGTGTGGGCGCGAGATCGCGCCCACCTTTCCTAGAGCTCCAGGGACCGTGGAGGCCTGAGGTCAT  1984

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 1985  CGGCCTGAGAGAAGAACACCGGACCCAGGGGAGATGTGGATTTTCAGCAGGAACTTTATTCCAATGCTAATGGC  2058

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2059  AGACATCAGGAAGGAGGAGAGGAACCATTTGTGCAGATCATCTAGAAGAACCTGGACCATTCTTGACAGAGCTG  2132

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2133  AATACAGTGATCACGTTGTCCTCCAAGGAGCAGGGGTGGGGTGGGGTACTTCTAGGAGTCCTTGGAGAAAAGTA  2206

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2207  AGAAACCAGGAGTGTTTCCAGTTCCACCCTTTCCTGCGGCACCACCTCCCTTTTTATATTGCTGAATGCCAACC  2280

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2281  TCCCTGGGGCGGAACCTGGAGGTCCTGTTTCTTATGGACTTGGTTGCCACAGTCCAGGAGCATTTGAAGGCACA  2354

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2355  GTGCAGGGGCTCAGATTGGCACAGAATTCTTTGTGAAATATGAGTGCCACAGACTGTAACAGATAGCTTCATGC  2428

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2429  ACACTATGCATTTTATTGGTTTGTTTGGAAAATGTTGGCCATTGAATTATTAATAGGTTTATTTCAAATAGTTT  2502

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2503  GGAAATTGTTGTACTTTTGAAAACATGCTGTTCCTGTAGAGTTTTTTGATGAGAGTTATAGTTGTTATATATAC  2576

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2577  CTAAAGATAATTTTCTTTTCATTTTTAAGTGAGAATTCTTTTTATCCTAAATCTTTTATTATCTTTAAATTTTT  2650

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2651  TTCTGTATTATTATATGTGCTCCTGAAGCGAGCACTCTTTTTATCTATGATACTTCCATAATAATCTCTTCTAT  2724

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2725  TTATAGCTATTGGTAGTTCCCCACCAGAAAAAAACATAATTCTGGTGATAGAAATTTTTATTTGCTGTTTAGGT  2798

Query  775  --------------------------------------------------------------------------  774
                                                                                      
Sbjct 2799  TTGTGACTGACTTGTGAGAATTCAGTTGTGATTTTTAACATGTCTCAGATATATATACTAACACGTCTAATATA  2872

Query  775  ----------------------------------------------  774
                                                          
Sbjct 2873  TACTATCTATTTTATTGGTTTATTTTGAAAAACATGGGTATAGAAT  2918

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