Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13704
- Subject:
- XR_001744735.1
- Aligned Length:
- 2177
- Identities:
- 222
- Gaps:
- 1942
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AACGACCACTGAAAACAACGCCGGTGGCAAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGG 370
Query 1 ------------------------------------------------------------ATGCAGCACCGAGA 14
||||||||||||||
Sbjct 371 AAACAGTCAGAGCCACCAGCCAATGATCTTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGA 444
Query 15 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCT 518
Query 89 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCGTGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 162
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 519 TCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTC 592
Query 163 AGATTACTGATACTTATCCT--------------------------TAAGAAC-----ATGGAAG--------- 196
|||||||||||||||||||| ||||||| .||||||
Sbjct 593 AGATTACTGATACTTATCCTTAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACG 666
Query 197 ---------GGGTGCTGATGGACGTGGAC--TGTGAGAGCGTCTAC---CC--CATTGTG-------------- 240
.|||||..| |.|||| |.|...|||.|||.| || |.|||||
Sbjct 667 CCAGAGCCCAGGTGCCCA-----GAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCTCCA 735
Query 241 -------------------------------------------------------------------------- 240
Sbjct 736 CGACCACGCTGCTTACTTAGTAGACAACCTGTGGGACTGTGCAGGGACTCAGCTGAAGGACTGGGAGGGTCTGA 809
Query 241 -------------------------------------------------------------------------- 240
Sbjct 810 CAAGCCTGCTGCTGGAGAAGGACCAGAGCACGTGCCACATGGAGCCAGGGCCAGGGACCTTCCACCTCCTAGGG 883
Query 241 -------------------------------------------------------------------------- 240
Sbjct 884 TGAAACCAGGAGAGATTGCTTGCTTCACTTGTACAAGGCAGGAACGGTGGCATGGGGTGGGGGAAACTTGGAGT 957
Query 241 -------------------------------------------------------------------------- 240
Sbjct 958 TGGAAGGTGGCTAATCTTTGATTCTATGTTTTTGATCCTCCTGGCACTCCAGACCTGGGTGATGTGCAGGAGAG 1031
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1032 CACACTGATAGAAATCCTTGTGTCCAGTGCCCAGCAACTCCTGCCTCAGCCTCCCGAGCAGCTGGGACTACAGG 1105
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1106 CGCCCGCCACCACGCCTGGCTAACTTTTTTGTATTTTTAGTAGAGACGGGTTTTCACCGTGTTAGCCAGGATGG 1179
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1180 TCTTGATCTCTTGACCTTGTGATCCACCTGCCTCATCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGC 1253
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1254 GCCCAGCATGTTAGACAATTTTTAATTCATCCTCTCTGTGCTGTTGTTTTCTCAGCTGTGAAAGGAATATTCTG 1327
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1328 GTGGGGACAAGGTTACAGAGTTGCTGAGAGGGTCTCATGACATGAAGGTACTGGCCTTGGCACAGTGCCTGGGG 1401
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1402 GGGCGGGGACTCCGCACATGCCTGTGATGTCACAGTTACTGTCAGTTCACAGCGAACCTTCCCTCCTTTTCCTG 1475
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1476 TTGACTTTCCCACACTCCTGTAACCCTCCCTCCCTCCCTTCTTCCTCTCTCTCTCTCTCACTCACGCACACGCA 1549
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1550 CACACACACACACACACACACACACACACACTCCATTCTCTGTCTCCATGACTCTGGAGTAAACTAACGTCTCG 1623
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1624 AGTTGCCATTGGAAGCCCCATTGTCCTCATTTTGTTTTGTTTTGTTTGTTTGAGACGGGGTCTCGCTCTGTCCC 1697
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1698 CCAGGCTGGAGTGCAGTGGTGCGATCTCAGCCCACTGCAGCCTCCGCCTCCTAGGTTCAAGCGATTCTCCTGCC 1771
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1772 TCACCCTCCTGAGTAGCTGTGATCATAGGTGCCCGCCACCACACCCGACTAATTTTTGTGTTTTTTAGTAGAGA 1845
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1846 CAGGGTTTCACTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTCCCAA 1919
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1920 AGTGCTGGGATTACAGGAGTGAGCCACCATGCCCAGCCTCCGTTGTCCTCATTTAGACTTTCATGGGTTATAGG 1993
Query 241 -------------------------------------------------------------------------- 240
Sbjct 1994 CACTTTTGACTTCCTGGGGTCCTTCTTCAGTTAAAAAAAAAAATTAGAAAATTAGGCCGGGCGTGGTGGCACAT 2067
Query 241 -------------------------------------------------------------------------- 240
Sbjct 2068 GCCTGTAATCCCAGCACTTTATGAGGCCGAGGTGGGAGGATCACCTGAGGTCGGGAGTTCAAGACCAGCCTGAC 2141
Query 241 ------------------------------- 240
Sbjct 2142 CAATGTGGAGAAACCCCGTCCCTACTAAAAA 2172
